RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
SRP54-AS1-204ENST00000556705 TRPC5Q9UL62 973 aaPredicted RBP18.88■□□□□ 0.61
SRP54-AS1-204ENST00000556705 CDK12Q9NYV4 1490 aaPredicted RBP18.88■□□□□ 0.61
SRP54-AS1-204ENST00000556705 ATRNO75882 1429 aa18.87■□□□□ 0.61
SRP54-AS1-204ENST00000556705 RALGAPBQ86X10 1494 aa18.87■□□□□ 0.61
SRP54-AS1-204ENST00000556705 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
SRP54-AS1-204ENST00000556705 CRYBG1Q9Y4K1 1723 aa18.87■□□□□ 0.61
SRP54-AS1-204ENST00000556705 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.86■□□□□ 0.61
SRP54-AS1-204ENST00000556705 SLIT2O94813 1529 aa18.86■□□□□ 0.61
SRP54-AS1-204ENST00000556705 PPIP5K1Q6PFW1 1433 aa18.86■□□□□ 0.61
SRP54-AS1-204ENST00000556705 EVC2Q86UK5 1308 aa18.86■□□□□ 0.61
SRP54-AS1-204ENST00000556705 PLCH1Q4KWH8 1693 aa18.85■□□□□ 0.61
SRP54-AS1-204ENST00000556705 RGS12O14924 1447 aa18.84■□□□□ 0.61
SRP54-AS1-204ENST00000556705 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
SRP54-AS1-204ENST00000556705 CABP1Q9NZU7 370 aa18.84■□□□□ 0.61
SRP54-AS1-204ENST00000556705 UNC5CLQ8IV45 518 aa18.83■□□□□ 0.6
SRP54-AS1-204ENST00000556705 NUTM2GQ5VZR2 741 aa18.82■□□□□ 0.6
SRP54-AS1-204ENST00000556705 NWD2Q9ULI1 1742 aa18.82■□□□□ 0.6
SRP54-AS1-204ENST00000556705 GJD4Q96KN9 370 aaPredicted RBP18.8■□□□□ 0.6
SRP54-AS1-204ENST00000556705 PHRF1Q9P1Y6 1649 aaKnown RBP18.79■□□□□ 0.6
SRP54-AS1-204ENST00000556705 SBNO2Q9Y2G9 1366 aa18.79■□□□□ 0.6
SRP54-AS1-204ENST00000556705 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
SRP54-AS1-204ENST00000556705 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
SRP54-AS1-204ENST00000556705 GLI3P10071 1580 aa18.77■□□□□ 0.6
SRP54-AS1-204ENST00000556705 UPF1Q92900 1129 aaKnown RBP eCLIP18.77■□□□□ 0.6
SRP54-AS1-204ENST00000556705 AKAP12Q02952 1782 aa18.77■□□□□ 0.6
SRP54-AS1-204ENST00000556705 NRAPQ86VF7 1730 aa18.77■□□□□ 0.59
SRP54-AS1-204ENST00000556705 USP6P35125 1406 aa18.75■□□□□ 0.59
SRP54-AS1-204ENST00000556705 VPS72Q15906 364 aa18.75■□□□□ 0.59
SRP54-AS1-204ENST00000556705 BTG4Q9NY30 223 aa18.75■□□□□ 0.59
SRP54-AS1-204ENST00000556705 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
SRP54-AS1-204ENST00000556705 BRD4O60885 1362 aaPredicted RBP18.74■□□□□ 0.59
SRP54-AS1-204ENST00000556705 ATAD2Q6PL18 1390 aa18.74■□□□□ 0.59
SRP54-AS1-204ENST00000556705 KIAA0232Q92628 1395 aa18.73■□□□□ 0.59
SRP54-AS1-204ENST00000556705 BRWD3Q6RI45 1802 aa18.73■□□□□ 0.59
SRP54-AS1-204ENST00000556705 ZC3H6P61129 1189 aaKnown RBP18.73■□□□□ 0.59
SRP54-AS1-204ENST00000556705 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
SRP54-AS1-204ENST00000556705 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
SRP54-AS1-204ENST00000556705 SSH2Q76I76 1423 aa18.73■□□□□ 0.59
SRP54-AS1-204ENST00000556705 ST20-MTHFSA0A0A6YYL1 179 aa18.72■□□□□ 0.59
SRP54-AS1-204ENST00000556705 CHRNA2Q15822 529 aa18.72■□□□□ 0.59
SRP54-AS1-204ENST00000556705 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
SRP54-AS1-204ENST00000556705 CCDC9Q9Y3X0 531 aaKnown RBP18.72■□□□□ 0.59
SRP54-AS1-204ENST00000556705 NRKQ7Z2Y5 1582 aa18.72■□□□□ 0.59
SRP54-AS1-204ENST00000556705 USP19O94966 1318 aa18.72■□□□□ 0.59
SRP54-AS1-204ENST00000556705 TESK2Q96S53 571 aa18.71■□□□□ 0.59
SRP54-AS1-204ENST00000556705 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
SRP54-AS1-204ENST00000556705 PIK3C2AO00443 1686 aa18.7■□□□□ 0.58
SRP54-AS1-204ENST00000556705 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
SRP54-AS1-204ENST00000556705 MON2Q7Z3U7 1717 aa18.69■□□□□ 0.58
SRP54-AS1-204ENST00000556705 GCP02774 474 aa18.69■□□□□ 0.58
SRP54-AS1-204ENST00000556705 NLRP6P59044 892 aa18.69■□□□□ 0.58
SRP54-AS1-204ENST00000556705 TTC21BQ7Z4L5 1316 aa18.69■□□□□ 0.58
SRP54-AS1-204ENST00000556705 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
SRP54-AS1-204ENST00000556705 SLC12A5Q9H2X9 1139 aa18.68■□□□□ 0.58
SRP54-AS1-204ENST00000556705 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
SRP54-AS1-204ENST00000556705 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
SRP54-AS1-204ENST00000556705 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
SRP54-AS1-204ENST00000556705 TMC1Q8TDI8 760 aa18.67■□□□□ 0.58
SRP54-AS1-204ENST00000556705 CD163L1Q9NR16 1453 aa18.66■□□□□ 0.58
SRP54-AS1-204ENST00000556705 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
SRP54-AS1-204ENST00000556705 CPDO75976 1380 aa18.66■□□□□ 0.58
SRP54-AS1-204ENST00000556705 SLIT3O75094 1523 aa18.65■□□□□ 0.58
SRP54-AS1-204ENST00000556705 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
SRP54-AS1-204ENST00000556705 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
SRP54-AS1-204ENST00000556705 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
SRP54-AS1-204ENST00000556705 USP47Q96K76 1375 aa18.65■□□□□ 0.58
SRP54-AS1-204ENST00000556705 LMO7Q8WWI1 1683 aa18.64■□□□□ 0.57
SRP54-AS1-204ENST00000556705 CAMTA1Q9Y6Y1 1673 aa18.64■□□□□ 0.57
SRP54-AS1-204ENST00000556705 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
SRP54-AS1-204ENST00000556705 FAM98CQ17RN3 349 aaKnown RBP18.63■□□□□ 0.57
SRP54-AS1-204ENST00000556705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
SRP54-AS1-204ENST00000556705 ZRANB1Q9UGI0 708 aa18.62■□□□□ 0.57
SRP54-AS1-204ENST00000556705 COL18A1P39060 1754 aa18.61■□□□□ 0.57
SRP54-AS1-204ENST00000556705 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
SRP54-AS1-204ENST00000556705 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
SRP54-AS1-204ENST00000556705 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
SRP54-AS1-204ENST00000556705 EVA1CP58658 441 aa18.61■□□□□ 0.57
SRP54-AS1-204ENST00000556705 HDGFL2Q7Z4V5 671 aaPredicted RBP18.61■□□□□ 0.57
SRP54-AS1-204ENST00000556705 RGPD5Q99666 1765 aa18.6■□□□□ 0.57
SRP54-AS1-204ENST00000556705 A0A0G2JS52 829 aa18.6■□□□□ 0.57
SRP54-AS1-204ENST00000556705 MYT1Q01538 1121 aa18.6■□□□□ 0.57
SRP54-AS1-204ENST00000556705 EP400Q96L91 3159 aa18.59■□□□□ 0.57
SRP54-AS1-204ENST00000556705 A0A1W2PP64 1363 aa18.59■□□□□ 0.57
SRP54-AS1-204ENST00000556705 TERF2IPQ9NYB0 399 aa18.59■□□□□ 0.57
SRP54-AS1-204ENST00000556705 SOX12O15370 315 aa18.58■□□□□ 0.56
SRP54-AS1-204ENST00000556705 TMF1P82094 1093 aa18.58■□□□□ 0.56
SRP54-AS1-204ENST00000556705 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
SRP54-AS1-204ENST00000556705 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
SRP54-AS1-204ENST00000556705 NME9Q86XW9 330 aa18.58■□□□□ 0.56
SRP54-AS1-204ENST00000556705 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
SRP54-AS1-204ENST00000556705 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
SRP54-AS1-204ENST00000556705 THSD7AQ9UPZ6 1657 aa18.57■□□□□ 0.56
SRP54-AS1-204ENST00000556705 KCNH5Q8NCM2 988 aa18.57■□□□□ 0.56
SRP54-AS1-204ENST00000556705 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
SRP54-AS1-204ENST00000556705 EDC4Q6P2E9 1401 aaKnown RBP18.57■□□□□ 0.56
SRP54-AS1-204ENST00000556705 USP31Q70CQ4 1352 aa18.56■□□□□ 0.56
SRP54-AS1-204ENST00000556705 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
SRP54-AS1-204ENST00000556705 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
SRP54-AS1-204ENST00000556705 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms