RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 STAC3Q96MF2 364 aa22.69■■□□□ 1.22
SUPT16H-205ENST00000556217 BTG4Q9NY30 223 aa22.68■■□□□ 1.22
SUPT16H-205ENST00000556217 WASLO00401 505 aaPredicted RBP22.67■■□□□ 1.22
SUPT16H-205ENST00000556217 EN1Q05925 392 aaPredicted RBP22.67■■□□□ 1.22
SUPT16H-205ENST00000556217 DCAF11Q8TEB1 546 aa22.67■■□□□ 1.22
SUPT16H-205ENST00000556217 KDM2AQ9Y2K7 1162 aa22.67■■□□□ 1.22
SUPT16H-205ENST00000556217 R3HDM1Q15032 1099 aaKnown RBP22.66■■□□□ 1.22
SUPT16H-205ENST00000556217 NGDNQ8NEJ9 315 aaKnown RBP22.66■■□□□ 1.22
SUPT16H-205ENST00000556217 ITSN1Q15811 1721 aa22.65■■□□□ 1.22
SUPT16H-205ENST00000556217 PRR36Q9H6K5 1346 aa22.65■■□□□ 1.22
SUPT16H-205ENST00000556217 FAM98CQ17RN3 349 aaKnown RBP22.65■■□□□ 1.22
SUPT16H-205ENST00000556217 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
SUPT16H-205ENST00000556217 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
SUPT16H-205ENST00000556217 RGPD1P0DJD0 1748 aa22.61■■□□□ 1.21
SUPT16H-205ENST00000556217 ARHGEF28Q8N1W1 1705 aaKnown RBP22.61■■□□□ 1.21
SUPT16H-205ENST00000556217 YY1P25490 414 aa22.6■■□□□ 1.21
SUPT16H-205ENST00000556217 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
SUPT16H-205ENST00000556217 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
SUPT16H-205ENST00000556217 PRDM11Q9NQV5 511 aa22.59■■□□□ 1.21
SUPT16H-205ENST00000556217 DISP2A7MBM2 1401 aa22.57■■□□□ 1.2
SUPT16H-205ENST00000556217 THSD7AQ9UPZ6 1657 aa22.56■■□□□ 1.2
SUPT16H-205ENST00000556217 ATP7BP35670 1465 aa22.56■■□□□ 1.2
SUPT16H-205ENST00000556217 NUDT16Q96DE0 195 aaKnown RBP22.56■■□□□ 1.2
SUPT16H-205ENST00000556217 FAM182BQ5T319 152 aa22.55■■□□□ 1.2
SUPT16H-205ENST00000556217 EZH2Q15910 746 aaKnown RBP22.54■■□□□ 1.2
SUPT16H-205ENST00000556217 PHRF1Q9P1Y6 1649 aaKnown RBP22.53■■□□□ 1.2
SUPT16H-205ENST00000556217 KIAA0232Q92628 1395 aa22.52■■□□□ 1.2
SUPT16H-205ENST00000556217 CAMKK2Q96RR4 588 aa22.51■■□□□ 1.19
SUPT16H-205ENST00000556217 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
SUPT16H-205ENST00000556217 SPATA31A1Q5TZJ5 1347 aa22.51■■□□□ 1.19
SUPT16H-205ENST00000556217 TOPAZ1Q8N9V7 1692 aa22.5■■□□□ 1.19
SUPT16H-205ENST00000556217 TNS1Q9HBL0 1735 aaKnown RBP22.5■■□□□ 1.19
SUPT16H-205ENST00000556217 KIAA1210Q9ULL0 1709 aa22.49■■□□□ 1.19
SUPT16H-205ENST00000556217 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
SUPT16H-205ENST00000556217 POLR3AO14802 1390 aaPredicted RBP22.49■■□□□ 1.19
SUPT16H-205ENST00000556217 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
SUPT16H-205ENST00000556217 FAM196AQ6ZSG2 479 aa22.48■■□□□ 1.19
SUPT16H-205ENST00000556217 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
SUPT16H-205ENST00000556217 PARD3Q8TEW0 1356 aa22.48■■□□□ 1.19
SUPT16H-205ENST00000556217 DCAF8L1A6NGE4 600 aa22.47■■□□□ 1.19
SUPT16H-205ENST00000556217 TRIM37O94972 964 aa22.47■■□□□ 1.19
SUPT16H-205ENST00000556217 ZC3H6P61129 1189 aaKnown RBP22.47■■□□□ 1.19
SUPT16H-205ENST00000556217 ACEP12821 1306 aa22.47■■□□□ 1.19
SUPT16H-205ENST00000556217 NBPF8Q3BBV2 869 aa22.46■■□□□ 1.19
SUPT16H-205ENST00000556217 NUTM2GQ5VZR2 741 aa22.46■■□□□ 1.19
SUPT16H-205ENST00000556217 APBA3O96018 575 aa22.45■■□□□ 1.18
SUPT16H-205ENST00000556217 EVA1CP58658 441 aa22.45■■□□□ 1.18
SUPT16H-205ENST00000556217 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
SUPT16H-205ENST00000556217 NBPF14Q5TI25 921 aa22.43■■□□□ 1.18
SUPT16H-205ENST00000556217 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
SUPT16H-205ENST00000556217 NRKQ7Z2Y5 1582 aa22.42■■□□□ 1.18
SUPT16H-205ENST00000556217 SSH2Q76I76 1423 aa22.42■■□□□ 1.18
SUPT16H-205ENST00000556217 BARGINQ6ZT62 677 aa22.42■■□□□ 1.18
SUPT16H-205ENST00000556217 USP35Q9P2H5 1018 aa22.42■■□□□ 1.18
SUPT16H-205ENST00000556217 PPP1R1BQ9UD71 204 aaPredicted RBP22.42■■□□□ 1.18
SUPT16H-205ENST00000556217 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
SUPT16H-205ENST00000556217 CPDO75976 1380 aa22.39■■□□□ 1.18
SUPT16H-205ENST00000556217 SPON1Q9HCB6 807 aa22.39■■□□□ 1.17
SUPT16H-205ENST00000556217 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
SUPT16H-205ENST00000556217 NLRP13Q86W25 1043 aa22.38■■□□□ 1.17
SUPT16H-205ENST00000556217 CAMTA1Q9Y6Y1 1673 aa22.38■■□□□ 1.17
SUPT16H-205ENST00000556217 USP19O94966 1318 aa22.37■■□□□ 1.17
SUPT16H-205ENST00000556217 LMO7Q8WWI1 1683 aa22.37■■□□□ 1.17
SUPT16H-205ENST00000556217 TCP11L2Q8N4U5 519 aa22.37■■□□□ 1.17
SUPT16H-205ENST00000556217 PPIP5K1Q6PFW1 1433 aa22.37■■□□□ 1.17
SUPT16H-205ENST00000556217 LARP1Q6PKG0 1096 aaKnown RBP22.36■■□□□ 1.17
SUPT16H-205ENST00000556217 BRD4O60885 1362 aaPredicted RBP22.36■■□□□ 1.17
SUPT16H-205ENST00000556217 CENPJQ9HC77 1338 aaPredicted RBP22.35■■□□□ 1.17
SUPT16H-205ENST00000556217 KCNQ2O43526 872 aa22.35■■□□□ 1.17
SUPT16H-205ENST00000556217 NBPF1Q3BBV0 1214 aa22.35■■□□□ 1.17
SUPT16H-205ENST00000556217 THRAP3Q9Y2W1 955 aaKnown RBP22.35■■□□□ 1.17
SUPT16H-205ENST00000556217 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
SUPT16H-205ENST00000556217 RREB1Q92766 1687 aa22.33■■□□□ 1.17
SUPT16H-205ENST00000556217 GCP02774 474 aa22.33■■□□□ 1.17
SUPT16H-205ENST00000556217 QRICH2Q9H0J4 1663 aa22.33■■□□□ 1.16
SUPT16H-205ENST00000556217 PARP4Q9UKK3 1724 aaKnown RBP22.32■■□□□ 1.16
SUPT16H-205ENST00000556217 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
SUPT16H-205ENST00000556217 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
SUPT16H-205ENST00000556217 NUP188Q5SRE5 1749 aa22.31■■□□□ 1.16
SUPT16H-205ENST00000556217 COL5A2P05997 1499 aaPredicted RBP22.3■■□□□ 1.16
SUPT16H-205ENST00000556217 CRB1P82279 1406 aa22.29■■□□□ 1.16
SUPT16H-205ENST00000556217 USP6P35125 1406 aa22.27■■□□□ 1.16
SUPT16H-205ENST00000556217 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
SUPT16H-205ENST00000556217 NLRP6P59044 892 aa22.26■■□□□ 1.15
SUPT16H-205ENST00000556217 CABP1Q9NZU7 370 aa22.26■■□□□ 1.15
SUPT16H-205ENST00000556217 AATKQ6ZMQ8 1374 aa22.25■■□□□ 1.15
SUPT16H-205ENST00000556217 SLIT3O75094 1523 aa22.24■■□□□ 1.15
SUPT16H-205ENST00000556217 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
SUPT16H-205ENST00000556217 OVOS2A0A0J9YW53 1432 aa22.23■■□□□ 1.15
SUPT16H-205ENST00000556217 OVOS2Q6IE36 1432 aa22.23■■□□□ 1.15
SUPT16H-205ENST00000556217 EVC2Q86UK5 1308 aa22.22■■□□□ 1.15
SUPT16H-205ENST00000556217 PIK3C2AO00443 1686 aa22.21■■□□□ 1.15
SUPT16H-205ENST00000556217 RGPD3A6NKT7 1758 aaPredicted RBP22.21■■□□□ 1.15
SUPT16H-205ENST00000556217 RGPD4Q7Z3J3 1758 aa22.21■■□□□ 1.15
SUPT16H-205ENST00000556217 TOM1L2Q6ZVM7 507 aa22.21■■□□□ 1.15
SUPT16H-205ENST00000556217 ZNF784Q8NCA9 323 aaPredicted RBP22.21■■□□□ 1.15
SUPT16H-205ENST00000556217 LRRC37A3O60309 1634 aa22.2■■□□□ 1.15
SUPT16H-205ENST00000556217 PEAK1Q9H792 1746 aa22.2■■□□□ 1.14
SUPT16H-205ENST00000556217 SBF2Q86WG5 1849 aa22.2■■□□□ 1.14
SUPT16H-205ENST00000556217 DDB1Q16531 1140 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms