RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 CDK19Q9BWU1 502 aa19.85■□□□□ 0.77
SDR39U1-214ENST00000555778 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-214ENST00000555778 CENPJQ9HC77 1338 aaPredicted RBP19.83■□□□□ 0.77
SDR39U1-214ENST00000555778 UNC5CLQ8IV45 518 aa19.83■□□□□ 0.77
SDR39U1-214ENST00000555778 ATAD2Q6PL18 1390 aa19.82■□□□□ 0.76
SDR39U1-214ENST00000555778 GJD4Q96KN9 370 aaPredicted RBP19.81■□□□□ 0.76
SDR39U1-214ENST00000555778 NRKQ7Z2Y5 1582 aa19.81■□□□□ 0.76
SDR39U1-214ENST00000555778 ROCK2O75116 1388 aaKnown RBP19.81■□□□□ 0.76
SDR39U1-214ENST00000555778 PPIP5K1Q6PFW1 1433 aa19.8■□□□□ 0.76
SDR39U1-214ENST00000555778 NUTM2GQ5VZR2 741 aa19.8■□□□□ 0.76
SDR39U1-214ENST00000555778 SRPK2P78362 688 aaKnown RBP19.79■□□□□ 0.76
SDR39U1-214ENST00000555778 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
SDR39U1-214ENST00000555778 ACEP12821 1306 aa19.78■□□□□ 0.76
SDR39U1-214ENST00000555778 FAM83GA6ND36 823 aa19.78■□□□□ 0.76
SDR39U1-214ENST00000555778 CABP2Q9NPB3 220 aa19.78■□□□□ 0.76
SDR39U1-214ENST00000555778 POLR3AO14802 1390 aaPredicted RBP19.78■□□□□ 0.76
SDR39U1-214ENST00000555778 BTG4Q9NY30 223 aa19.74■□□□□ 0.75
SDR39U1-214ENST00000555778 KIAA0232Q92628 1395 aa19.73■□□□□ 0.75
SDR39U1-214ENST00000555778 A0A0G2JS52 829 aa19.73■□□□□ 0.75
SDR39U1-214ENST00000555778 MYT1Q01538 1121 aa19.73■□□□□ 0.75
SDR39U1-214ENST00000555778 VPS72Q15906 364 aa19.73■□□□□ 0.75
SDR39U1-214ENST00000555778 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
SDR39U1-214ENST00000555778 CCDC61Q9Y6R9 512 aa19.73■□□□□ 0.75
SDR39U1-214ENST00000555778 PIK3C2AO00443 1686 aa19.72■□□□□ 0.75
SDR39U1-214ENST00000555778 CHRNA2Q15822 529 aa19.72■□□□□ 0.75
SDR39U1-214ENST00000555778 PRDM11Q9NQV5 511 aa19.72■□□□□ 0.75
SDR39U1-214ENST00000555778 AKAP12Q02952 1782 aa19.71■□□□□ 0.75
SDR39U1-214ENST00000555778 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
SDR39U1-214ENST00000555778 ZC3H6P61129 1189 aaKnown RBP19.7■□□□□ 0.74
SDR39U1-214ENST00000555778 SEPT12Q8IYM1 358 aa19.7■□□□□ 0.74
SDR39U1-214ENST00000555778 THSD7AQ9UPZ6 1657 aa19.69■□□□□ 0.74
SDR39U1-214ENST00000555778 PLEKHG3A1L390 1219 aa19.69■□□□□ 0.74
SDR39U1-214ENST00000555778 LMO7Q8WWI1 1683 aa19.68■□□□□ 0.74
SDR39U1-214ENST00000555778 USP6P35125 1406 aa19.68■□□□□ 0.74
SDR39U1-214ENST00000555778 FAM98CQ17RN3 349 aaKnown RBP19.68■□□□□ 0.74
SDR39U1-214ENST00000555778 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
SDR39U1-214ENST00000555778 ABTB2Q8N961 1025 aa19.66■□□□□ 0.74
SDR39U1-214ENST00000555778 CABP1Q9NZU7 370 aa19.66■□□□□ 0.74
SDR39U1-214ENST00000555778 EVC2Q86UK5 1308 aa19.66■□□□□ 0.74
SDR39U1-214ENST00000555778 STRN4Q9NRL3 753 aa19.65■□□□□ 0.74
SDR39U1-214ENST00000555778 USP19O94966 1318 aa19.65■□□□□ 0.74
SDR39U1-214ENST00000555778 MON2Q7Z3U7 1717 aa19.65■□□□□ 0.74
SDR39U1-214ENST00000555778 ZBTB7CA1YPR0 619 aa19.64■□□□□ 0.73
SDR39U1-214ENST00000555778 CAMTA1Q9Y6Y1 1673 aa19.64■□□□□ 0.73
SDR39U1-214ENST00000555778 SLIT3O75094 1523 aa19.63■□□□□ 0.73
SDR39U1-214ENST00000555778 CARD11Q9BXL7 1154 aa19.63■□□□□ 0.73
SDR39U1-214ENST00000555778 SPATA31A5Q5VU36 1347 aa19.62■□□□□ 0.73
SDR39U1-214ENST00000555778 SPATA31A7Q8IWB4 1347 aa19.62■□□□□ 0.73
SDR39U1-214ENST00000555778 BLMP54132 1417 aaPredicted RBP19.61■□□□□ 0.73
SDR39U1-214ENST00000555778 SSH2Q76I76 1423 aa19.61■□□□□ 0.73
SDR39U1-214ENST00000555778 FAM182BQ5T319 152 aa19.61■□□□□ 0.73
SDR39U1-214ENST00000555778 SRCAPQ6ZRS2 3230 aa19.61■□□□□ 0.73
SDR39U1-214ENST00000555778 KRT27Q7Z3Y8 459 aa19.6■□□□□ 0.73
SDR39U1-214ENST00000555778 USP35Q9P2H5 1018 aa19.6■□□□□ 0.73
SDR39U1-214ENST00000555778 RGPD1P0DJD0 1748 aa19.59■□□□□ 0.73
SDR39U1-214ENST00000555778 TNS1Q9HBL0 1735 aaKnown RBP19.59■□□□□ 0.73
SDR39U1-214ENST00000555778 CPDO75976 1380 aa19.57■□□□□ 0.72
SDR39U1-214ENST00000555778 RGPD5Q99666 1765 aa19.57■□□□□ 0.72
SDR39U1-214ENST00000555778 SPATA31A1Q5TZJ5 1347 aa19.57■□□□□ 0.72
SDR39U1-214ENST00000555778 COL5A2P05997 1499 aaPredicted RBP19.57■□□□□ 0.72
SDR39U1-214ENST00000555778 SOX12O15370 315 aa19.57■□□□□ 0.72
SDR39U1-214ENST00000555778 DEFB132Q7Z7B7 95 aa19.57■□□□□ 0.72
SDR39U1-214ENST00000555778 WNK3Q9BYP7 1800 aa19.56■□□□□ 0.72
SDR39U1-214ENST00000555778 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
SDR39U1-214ENST00000555778 GCP02774 474 aa19.56■□□□□ 0.72
SDR39U1-214ENST00000555778 NLRP6P59044 892 aa19.56■□□□□ 0.72
SDR39U1-214ENST00000555778 NLRP13Q86W25 1043 aa19.56■□□□□ 0.72
SDR39U1-214ENST00000555778 SBNO2Q9Y2G9 1366 aa19.56■□□□□ 0.72
SDR39U1-214ENST00000555778 LARP1Q6PKG0 1096 aaKnown RBP19.55■□□□□ 0.72
SDR39U1-214ENST00000555778 KTN1Q86UP2 1357 aaKnown RBP19.55■□□□□ 0.72
SDR39U1-214ENST00000555778 COL18A1P39060 1754 aa19.55■□□□□ 0.72
SDR39U1-214ENST00000555778 CD163L1Q9NR16 1453 aa19.54■□□□□ 0.72
SDR39U1-214ENST00000555778 CPSF1Q10570 1443 aaKnown RBP19.54■□□□□ 0.72
SDR39U1-214ENST00000555778 BRD4O60885 1362 aaPredicted RBP19.54■□□□□ 0.72
SDR39U1-214ENST00000555778 NFAT5O94916 1531 aa19.53■□□□□ 0.72
SDR39U1-214ENST00000555778 EVA1CP58658 441 aa19.53■□□□□ 0.72
SDR39U1-214ENST00000555778 LRRC37A3O60309 1634 aa19.53■□□□□ 0.72
SDR39U1-214ENST00000555778 TTC21BQ7Z4L5 1316 aa19.52■□□□□ 0.72
SDR39U1-214ENST00000555778 PARP4Q9UKK3 1724 aaKnown RBP19.51■□□□□ 0.71
SDR39U1-214ENST00000555778 SF3B2Q13435 895 aaKnown RBP19.51■□□□□ 0.71
SDR39U1-214ENST00000555778 USP54Q70EL1 1684 aa19.51■□□□□ 0.71
SDR39U1-214ENST00000555778 LTN1O94822 1766 aa19.51■□□□□ 0.71
SDR39U1-214ENST00000555778 CCDC125Q86Z20 511 aa19.5■□□□□ 0.71
SDR39U1-214ENST00000555778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.5■□□□□ 0.71
SDR39U1-214ENST00000555778 TMC1Q8TDI8 760 aa19.5■□□□□ 0.71
SDR39U1-214ENST00000555778 ZRANB1Q9UGI0 708 aa19.49■□□□□ 0.71
SDR39U1-214ENST00000555778 CRB1P82279 1406 aa19.48■□□□□ 0.71
SDR39U1-214ENST00000555778 A0A1W2PP64 1363 aa19.47■□□□□ 0.71
SDR39U1-214ENST00000555778 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
SDR39U1-214ENST00000555778 TCP11L2Q8N4U5 519 aa19.46■□□□□ 0.71
SDR39U1-214ENST00000555778 TTC21AQ8NDW8 1320 aa19.46■□□□□ 0.71
SDR39U1-214ENST00000555778 NME9Q86XW9 330 aa19.45■□□□□ 0.7
SDR39U1-214ENST00000555778 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
SDR39U1-214ENST00000555778 ST20-MTHFSA0A0A6YYL1 179 aa19.44■□□□□ 0.7
SDR39U1-214ENST00000555778 ZNF692Q9BU19 519 aaPredicted RBP19.44■□□□□ 0.7
SDR39U1-214ENST00000555778 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
SDR39U1-214ENST00000555778 USP47Q96K76 1375 aa19.44■□□□□ 0.7
SDR39U1-214ENST00000555778 TESK2Q96S53 571 aa19.43■□□□□ 0.7
SDR39U1-214ENST00000555778 AXIN2Q9Y2T1 843 aa19.43■□□□□ 0.7
SDR39U1-214ENST00000555778 EDC4Q6P2E9 1401 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms