RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 CDCA8Q53HL2 280 aa28.67■■■□□ 2.18
FOXN3-209ENST00000555353 USP6P35125 1406 aa28.66■■■□□ 2.18
FOXN3-209ENST00000555353 BRD4O60885 1362 aaPredicted RBP28.66■■■□□ 2.18
FOXN3-209ENST00000555353 ZNF692Q9BU19 519 aaPredicted RBP28.66■■■□□ 2.18
FOXN3-209ENST00000555353 HSPA5P11021 654 aaKnown RBP28.64■■■□□ 2.18
FOXN3-209ENST00000555353 C8orf37Q96NL8 207 aa28.64■■■□□ 2.18
FOXN3-209ENST00000555353 CABLES1Q8TDN4 633 aa28.63■■■□□ 2.17
FOXN3-209ENST00000555353 MARF1Q9Y4F3 1742 aaKnown RBP28.63■■■□□ 2.17
FOXN3-209ENST00000555353 ABCA3Q99758 1704 aa28.62■■■□□ 2.17
FOXN3-209ENST00000555353 SLC12A5Q9H2X9 1139 aa28.62■■■□□ 2.17
FOXN3-209ENST00000555353 NINLQ9Y2I6 1382 aa28.62■■■□□ 2.17
FOXN3-209ENST00000555353 CPSF1Q10570 1443 aaKnown RBP28.62■■■□□ 2.17
FOXN3-209ENST00000555353 ABTB2Q8N961 1025 aa28.62■■■□□ 2.17
FOXN3-209ENST00000555353 KTN1Q86UP2 1357 aaKnown RBP28.61■■■□□ 2.17
FOXN3-209ENST00000555353 HDGFL2Q7Z4V5 671 aaPredicted RBP28.6■■■□□ 2.17
FOXN3-209ENST00000555353 NGLY1Q96IV0 654 aa28.6■■■□□ 2.17
FOXN3-209ENST00000555353 TERF2IPQ9NYB0 399 aa28.6■■■□□ 2.17
FOXN3-209ENST00000555353 RGS17Q9UGC6 210 aaPredicted RBP28.6■■■□□ 2.17
FOXN3-209ENST00000555353 MON2Q7Z3U7 1717 aa28.59■■■□□ 2.17
FOXN3-209ENST00000555353 NUTM2GQ5VZR2 741 aa28.58■■■□□ 2.17
FOXN3-209ENST00000555353 AFF2P51816 1311 aa28.57■■■□□ 2.16
FOXN3-209ENST00000555353 CD163L1Q9NR16 1453 aa28.57■■■□□ 2.16
FOXN3-209ENST00000555353 ZNF772Q68DY9 489 aaPredicted RBP28.57■■■□□ 2.16
FOXN3-209ENST00000555353 SSH2Q76I76 1423 aa28.56■■■□□ 2.16
FOXN3-209ENST00000555353 CRYBG1Q9Y4K1 1723 aa28.55■■■□□ 2.16
FOXN3-209ENST00000555353 NRKQ7Z2Y5 1582 aa28.55■■■□□ 2.16
FOXN3-209ENST00000555353 NLRP13Q86W25 1043 aa28.54■■■□□ 2.16
FOXN3-209ENST00000555353 TTC21BQ7Z4L5 1316 aa28.54■■■□□ 2.16
FOXN3-209ENST00000555353 A0A1W2PP64 1363 aa28.53■■■□□ 2.16
FOXN3-209ENST00000555353 TTC21AQ8NDW8 1320 aa28.53■■■□□ 2.16
FOXN3-209ENST00000555353 PHRF1Q9P1Y6 1649 aaKnown RBP28.52■■■□□ 2.16
FOXN3-209ENST00000555353 PIK3C2AO00443 1686 aa28.51■■■□□ 2.15
FOXN3-209ENST00000555353 NLRP6P59044 892 aa28.51■■■□□ 2.15
FOXN3-209ENST00000555353 POLR3GLQ9BT43 218 aa28.5■■■□□ 2.15
FOXN3-209ENST00000555353 EDC4Q6P2E9 1401 aaKnown RBP28.49■■■□□ 2.15
FOXN3-209ENST00000555353 POTEAQ6S8J7 498 aa28.49■■■□□ 2.15
FOXN3-209ENST00000555353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.49■■■□□ 2.153e-7■■■□□ 14.7
FOXN3-209ENST00000555353 FNBP4Q8N3X1 1017 aaPredicted RBP28.49■■■□□ 2.15
FOXN3-209ENST00000555353 ANKRD36BQ8N2N9 1353 aa28.48■■■□□ 2.15
FOXN3-209ENST00000555353 USP21Q9UK80 565 aa28.48■■■□□ 2.15
FOXN3-209ENST00000555353 USP19O94966 1318 aa28.47■■■□□ 2.15
FOXN3-209ENST00000555353 MYOM1P52179 1685 aa28.47■■■□□ 2.15
FOXN3-209ENST00000555353 ILDR2Q71H61 639 aa28.45■■■□□ 2.15
FOXN3-209ENST00000555353 PRDM11Q9NQV5 511 aa28.44■■■□□ 2.14
FOXN3-209ENST00000555353 PLCH1Q4KWH8 1693 aa28.44■■■□□ 2.14
FOXN3-209ENST00000555353 SLIT2O94813 1529 aa28.43■■■□□ 2.14
FOXN3-209ENST00000555353 COL14A1Q05707 1796 aaKnown RBP28.42■■■□□ 2.14
FOXN3-209ENST00000555353 FAM83GA6ND36 823 aa28.42■■■□□ 2.14
FOXN3-209ENST00000555353 GCP02774 474 aa28.42■■■□□ 2.14
FOXN3-209ENST00000555353 QTRT2Q9H974 415 aaKnown RBP28.42■■■□□ 2.14
FOXN3-209ENST00000555353 NWD2Q9ULI1 1742 aa28.42■■■□□ 2.14
FOXN3-209ENST00000555353 ZC3H6P61129 1189 aaKnown RBP28.41■■■□□ 2.14
FOXN3-209ENST00000555353 NME9Q86XW9 330 aa28.41■■■□□ 2.14
FOXN3-209ENST00000555353 KIAA0232Q92628 1395 aa28.41■■■□□ 2.14
FOXN3-209ENST00000555353 BCL9LQ86UU0 1499 aa28.41■■■□□ 2.14
FOXN3-209ENST00000555353 SLIT3O75094 1523 aa28.4■■■□□ 2.14
FOXN3-209ENST00000555353 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.4■■■□□ 2.14
FOXN3-209ENST00000555353 TRPC5Q9UL62 973 aaPredicted RBP28.39■■■□□ 2.14
FOXN3-209ENST00000555353 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
FOXN3-209ENST00000555353 USP31Q70CQ4 1352 aa28.37■■■□□ 2.13
FOXN3-209ENST00000555353 C11orf95C9JLR9 678 aaPredicted RBP28.37■■■□□ 2.13
FOXN3-209ENST00000555353 RXRBP28702 533 aa28.37■■■□□ 2.13
FOXN3-209ENST00000555353 KCNH5Q8NCM2 988 aa28.37■■■□□ 2.13
FOXN3-209ENST00000555353 USP54Q70EL1 1684 aa28.36■■■□□ 2.13
FOXN3-209ENST00000555353 CPDO75976 1380 aa28.36■■■□□ 2.13
FOXN3-209ENST00000555353 BTG4Q9NY30 223 aa28.36■■■□□ 2.13
FOXN3-209ENST00000555353 ZRANB1Q9UGI0 708 aa28.36■■■□□ 2.13
FOXN3-209ENST00000555353 CHRNA2Q15822 529 aa28.35■■■□□ 2.13
FOXN3-209ENST00000555353 ATRNO75882 1429 aa28.34■■■□□ 2.13
FOXN3-209ENST00000555353 SOX12O15370 315 aa28.34■■■□□ 2.13
FOXN3-209ENST00000555353 RBM6P78332 1123 aaKnown RBP28.33■■■□□ 2.13
FOXN3-209ENST00000555353 ZBTB7CA1YPR0 619 aa28.32■■■□□ 2.12
FOXN3-209ENST00000555353 KIF7Q2M1P5 1343 aa28.32■■■□□ 2.12
FOXN3-209ENST00000555353 NRAPQ86VF7 1730 aa28.31■■■□□ 2.12
FOXN3-209ENST00000555353 NSD3Q9BZ95 1437 aa28.31■■■□□ 2.12
FOXN3-209ENST00000555353 COG3Q96JB2 828 aa28.3■■■□□ 2.12
FOXN3-209ENST00000555353 CARD14Q9BXL6 1004 aa28.3■■■□□ 2.12
FOXN3-209ENST00000555353 KIF20BQ96Q89 1820 aa28.3■■■□□ 2.12
FOXN3-209ENST00000555353 OVOS2A0A0J9YW53 1432 aa28.3■■■□□ 2.12
FOXN3-209ENST00000555353 OVOS2Q6IE36 1432 aa28.3■■■□□ 2.12
FOXN3-209ENST00000555353 CCDC9Q9Y3X0 531 aaKnown RBP28.28■■■□□ 2.12
FOXN3-209ENST00000555353 NFAT5O94916 1531 aa28.28■■■□□ 2.12
FOXN3-209ENST00000555353 FYB1O15117 783 aa28.27■■■□□ 2.12
FOXN3-209ENST00000555353 VPS72Q15906 364 aa28.27■■■□□ 2.12
FOXN3-209ENST00000555353 GJD4Q96KN9 370 aaPredicted RBP28.27■■■□□ 2.12
FOXN3-209ENST00000555353 PANK3Q9H999 370 aa28.26■■■□□ 2.11
FOXN3-209ENST00000555353 LMO7Q8WWI1 1683 aa28.26■■■□□ 2.11
FOXN3-209ENST00000555353 ARHGEF25Q86VW2 580 aa28.25■■■□□ 2.11
FOXN3-209ENST00000555353 GGNBP2Q9H3C7 697 aa28.25■■■□□ 2.11
FOXN3-209ENST00000555353 CDK12Q9NYV4 1490 aaPredicted RBP28.25■■■□□ 2.11
FOXN3-209ENST00000555353 AATKQ6ZMQ8 1374 aa28.25■■■□□ 2.11
FOXN3-209ENST00000555353 STRN4Q9NRL3 753 aa28.24■■■□□ 2.11
FOXN3-209ENST00000555353 CAMTA1Q9Y6Y1 1673 aa28.24■■■□□ 2.11
FOXN3-209ENST00000555353 EVA1CP58658 441 aa28.24■■■□□ 2.11
FOXN3-209ENST00000555353 CGNL1Q0VF96 1302 aa28.23■■■□□ 2.11
FOXN3-209ENST00000555353 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
FOXN3-209ENST00000555353 LTN1O94822 1766 aa28.23■■■□□ 2.11
FOXN3-209ENST00000555353 CCDC7Q96M83 1385 aa28.22■■■□□ 2.11
FOXN3-209ENST00000555353 COL18A1P39060 1754 aa28.21■■■□□ 2.11
FOXN3-209ENST00000555353 GLI3P10071 1580 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms