RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC6B-205ENST00000555269 FNBP4Q8N3X1 1017 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC6B-205ENST00000555269 USP21Q9UK80 565 aa17.59■□□□□ 0.41
TRAPPC6B-205ENST00000555269 TIMELESSQ9UNS1 1208 aa17.59■□□□□ 0.41
TRAPPC6B-205ENST00000555269 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.41
TRAPPC6B-205ENST00000555269 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
TRAPPC6B-205ENST00000555269 RXRBP28702 533 aa17.58■□□□□ 0.4
TRAPPC6B-205ENST00000555269 POLR3AO14802 1390 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC6B-205ENST00000555269 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
TRAPPC6B-205ENST00000555269 ARHGEF10O15013 1369 aa17.56■□□□□ 0.4
TRAPPC6B-205ENST00000555269 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
TRAPPC6B-205ENST00000555269 COL22A1Q8NFW1 1626 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC6B-205ENST00000555269 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
TRAPPC6B-205ENST00000555269 TESK2Q96S53 571 aa17.54■□□□□ 0.4
TRAPPC6B-205ENST00000555269 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
TRAPPC6B-205ENST00000555269 RBM6P78332 1123 aaKnown RBP17.52■□□□□ 0.4
TRAPPC6B-205ENST00000555269 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
TRAPPC6B-205ENST00000555269 TRPC5Q9UL62 973 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC6B-205ENST00000555269 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
TRAPPC6B-205ENST00000555269 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC6B-205ENST00000555269 UNC5CLQ8IV45 518 aa17.5■□□□□ 0.39
TRAPPC6B-205ENST00000555269 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
TRAPPC6B-205ENST00000555269 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
TRAPPC6B-205ENST00000555269 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
TRAPPC6B-205ENST00000555269 SBNO2Q9Y2G9 1366 aa17.49■□□□□ 0.39
TRAPPC6B-205ENST00000555269 ZNF692Q9BU19 519 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC6B-205ENST00000555269 TOPAZ1Q8N9V7 1692 aa17.47■□□□□ 0.39
TRAPPC6B-205ENST00000555269 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
TRAPPC6B-205ENST00000555269 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
TRAPPC6B-205ENST00000555269 USP47Q96K76 1375 aa17.46■□□□□ 0.39
TRAPPC6B-205ENST00000555269 NLRP6P59044 892 aa17.46■□□□□ 0.39
TRAPPC6B-205ENST00000555269 CHRNA2Q15822 529 aa17.46■□□□□ 0.39
TRAPPC6B-205ENST00000555269 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
TRAPPC6B-205ENST00000555269 GJD4Q96KN9 370 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC6B-205ENST00000555269 BTG4Q9NY30 223 aa17.46■□□□□ 0.39
TRAPPC6B-205ENST00000555269 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
TRAPPC6B-205ENST00000555269 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
TRAPPC6B-205ENST00000555269 SLIT2O94813 1529 aa17.45■□□□□ 0.38
TRAPPC6B-205ENST00000555269 ATRNO75882 1429 aa17.45■□□□□ 0.38
TRAPPC6B-205ENST00000555269 USP6P35125 1406 aa17.45■□□□□ 0.38
TRAPPC6B-205ENST00000555269 TTC21BQ7Z4L5 1316 aa17.45■□□□□ 0.38
TRAPPC6B-205ENST00000555269 GCP02774 474 aa17.44■□□□□ 0.38
TRAPPC6B-205ENST00000555269 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
TRAPPC6B-205ENST00000555269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAPPC6B-205ENST00000555269 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
TRAPPC6B-205ENST00000555269 CCDC9Q9Y3X0 531 aaKnown RBP17.43■□□□□ 0.38
TRAPPC6B-205ENST00000555269 SSH2Q76I76 1423 aa17.43■□□□□ 0.38
TRAPPC6B-205ENST00000555269 KTN1Q86UP2 1357 aaKnown RBP17.42■□□□□ 0.38
TRAPPC6B-205ENST00000555269 KIAA0232Q92628 1395 aa17.42■□□□□ 0.38
TRAPPC6B-205ENST00000555269 CPSF1Q10570 1443 aaKnown RBP17.42■□□□□ 0.38
TRAPPC6B-205ENST00000555269 VPS72Q15906 364 aa17.42■□□□□ 0.38
TRAPPC6B-205ENST00000555269 BRD4O60885 1362 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC6B-205ENST00000555269 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
TRAPPC6B-205ENST00000555269 TMF1P82094 1093 aa17.41■□□□□ 0.38
TRAPPC6B-205ENST00000555269 USP19O94966 1318 aa17.41■□□□□ 0.38
TRAPPC6B-205ENST00000555269 ZBTB7CA1YPR0 619 aa17.4■□□□□ 0.38
TRAPPC6B-205ENST00000555269 HDGFL2Q7Z4V5 671 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC6B-205ENST00000555269 RGS12O14924 1447 aa17.39■□□□□ 0.38
TRAPPC6B-205ENST00000555269 MARF1Q9Y4F3 1742 aaKnown RBP17.39■□□□□ 0.37
TRAPPC6B-205ENST00000555269 SOX12O15370 315 aa17.39■□□□□ 0.37
TRAPPC6B-205ENST00000555269 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.37
TRAPPC6B-205ENST00000555269 CD163L1Q9NR16 1453 aa17.38■□□□□ 0.37
TRAPPC6B-205ENST00000555269 NME9Q86XW9 330 aa17.38■□□□□ 0.37
TRAPPC6B-205ENST00000555269 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
TRAPPC6B-205ENST00000555269 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
TRAPPC6B-205ENST00000555269 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
TRAPPC6B-205ENST00000555269 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC6B-205ENST00000555269 ABCA3Q99758 1704 aa17.36■□□□□ 0.37
TRAPPC6B-205ENST00000555269 EVA1CP58658 441 aa17.36■□□□□ 0.37
TRAPPC6B-205ENST00000555269 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRAPPC6B-205ENST00000555269 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
TRAPPC6B-205ENST00000555269 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRAPPC6B-205ENST00000555269 SEPT12Q8IYM1 358 aa17.35■□□□□ 0.37
TRAPPC6B-205ENST00000555269 A0A1W2PP64 1363 aa17.35■□□□□ 0.37
TRAPPC6B-205ENST00000555269 ONECUT3O60422 494 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC6B-205ENST00000555269 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
TRAPPC6B-205ENST00000555269 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.37
TRAPPC6B-205ENST00000555269 CPDO75976 1380 aa17.33■□□□□ 0.36
TRAPPC6B-205ENST00000555269 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
TRAPPC6B-205ENST00000555269 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.36
TRAPPC6B-205ENST00000555269 SPATA31A5Q5VU36 1347 aa17.32■□□□□ 0.36
TRAPPC6B-205ENST00000555269 SPATA31A7Q8IWB4 1347 aa17.32■□□□□ 0.36
TRAPPC6B-205ENST00000555269 LARP1Q6PKG0 1096 aaKnown RBP17.32■□□□□ 0.36
TRAPPC6B-205ENST00000555269 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
TRAPPC6B-205ENST00000555269 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
TRAPPC6B-205ENST00000555269 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
TRAPPC6B-205ENST00000555269 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
TRAPPC6B-205ENST00000555269 PLCH1Q4KWH8 1693 aa17.31■□□□□ 0.36
TRAPPC6B-205ENST00000555269 GLI3P10071 1580 aa17.31■□□□□ 0.36
TRAPPC6B-205ENST00000555269 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
TRAPPC6B-205ENST00000555269 PHRF1Q9P1Y6 1649 aaKnown RBP17.3■□□□□ 0.36
TRAPPC6B-205ENST00000555269 A0A0G2JS52 829 aa17.3■□□□□ 0.36
TRAPPC6B-205ENST00000555269 MYT1Q01538 1121 aa17.3■□□□□ 0.36
TRAPPC6B-205ENST00000555269 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
TRAPPC6B-205ENST00000555269 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
TRAPPC6B-205ENST00000555269 SPATA31A1Q5TZJ5 1347 aa17.29■□□□□ 0.36
TRAPPC6B-205ENST00000555269 C11orf95C9JLR9 678 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC6B-205ENST00000555269 FBLN1P23142 703 aa17.29■□□□□ 0.36
TRAPPC6B-205ENST00000555269 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
TRAPPC6B-205ENST00000555269 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms