RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 ATP1B4Q9UN42 357 aaPredicted RBP5.28□□□□□ -1.56
SEC23A-208ENST00000555017 SOGA1O94964 1423 aa5.28□□□□□ -1.56
SEC23A-208ENST00000555017 TOPBP1Q92547 1522 aa5.28□□□□□ -1.56
SEC23A-208ENST00000555017 FGD5Q6ZNL6 1462 aa5.27□□□□□ -1.57
SEC23A-208ENST00000555017 TOP2BQ02880 1626 aa5.27□□□□□ -1.57
SEC23A-208ENST00000555017 NUTM2BA6NNL0 878 aaPredicted RBP5.27□□□□□ -1.57
SEC23A-208ENST00000555017 NUTM2EB1AL46 878 aaPredicted RBP5.27□□□□□ -1.57
SEC23A-208ENST00000555017 JUNDP17535 347 aa5.27□□□□□ -1.57
SEC23A-208ENST00000555017 CTDSPL2Q05D32 466 aa5.27□□□□□ -1.57
SEC23A-208ENST00000555017 NUTM2DQ5VT03 806 aaPredicted RBP5.27□□□□□ -1.57
SEC23A-208ENST00000555017 NUTM2AQ8IVF1 878 aaPredicted RBP5.27□□□□□ -1.57
SEC23A-208ENST00000555017 ANKLE1Q8NAG6 615 aa5.27□□□□□ -1.57
SEC23A-208ENST00000555017 TSC1Q92574 1164 aa5.27□□□□□ -1.57
SEC23A-208ENST00000555017 RSPH6AQ9H0K4 717 aa5.27□□□□□ -1.57
SEC23A-208ENST00000555017 DNMBPQ6XZF7 1577 aa5.26□□□□□ -1.57
SEC23A-208ENST00000555017 PDS5BQ9NTI5 1447 aa5.26□□□□□ -1.57
SEC23A-208ENST00000555017 DIXDC1Q155Q3 683 aa5.26□□□□□ -1.57
SEC23A-208ENST00000555017 ZBTB3Q9H5J0 574 aa5.26□□□□□ -1.57
SEC23A-208ENST00000555017 MRC2Q9UBG0 1479 aa5.26□□□□□ -1.57
SEC23A-208ENST00000555017 LOC105371045A0A1W2PR82 267 aa5.25□□□□□ -1.57
SEC23A-208ENST00000555017 GJA5P36382 358 aa5.25□□□□□ -1.57
SEC23A-208ENST00000555017 GGCXP38435 758 aa5.25□□□□□ -1.57
SEC23A-208ENST00000555017 SLC19A1P41440 591 aa5.25□□□□□ -1.57
SEC23A-208ENST00000555017 TREML4Q6UXN2 200 aa5.25□□□□□ -1.57
SEC23A-208ENST00000555017 CUX2O14529 1486 aa5.25□□□□□ -1.57
SEC23A-208ENST00000555017 SUZ12Q15022 739 aaKnown RBP5.24□□□□□ -1.57
SEC23A-208ENST00000555017 TUSC1Q2TAM9 212 aa5.24□□□□□ -1.57
SEC23A-208ENST00000555017 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
SEC23A-208ENST00000555017 PRPF38BQ5VTL8 546 aaKnown RBP5.24□□□□□ -1.57
SEC23A-208ENST00000555017 TRIM67Q6ZTA4 783 aa5.24□□□□□ -1.57
SEC23A-208ENST00000555017 EPS8L1Q8TE68 723 aa5.24□□□□□ -1.57
SEC23A-208ENST00000555017 LRRN4Q8WUT4 740 aa5.24□□□□□ -1.57
SEC23A-208ENST00000555017 NUDT12Q9BQG2 462 aa5.24□□□□□ -1.57
SEC23A-208ENST00000555017 MAP10Q9P2G4 905 aa5.24□□□□□ -1.57
SEC23A-208ENST00000555017 POLA1P09884 1462 aaPredicted RBP5.24□□□□□ -1.57
SEC23A-208ENST00000555017 WDR62O43379 1518 aa5.23□□□□□ -1.57
SEC23A-208ENST00000555017 ZNF608Q9ULD9 1512 aaPredicted RBP5.23□□□□□ -1.57
SEC23A-208ENST00000555017 SKOR1P84550 965 aa5.23□□□□□ -1.57
SEC23A-208ENST00000555017 SPRYD7Q5W111 196 aa5.23□□□□□ -1.57
SEC23A-208ENST00000555017 LYPD8Q6UX82 237 aa5.23□□□□□ -1.57
SEC23A-208ENST00000555017 WDR97A6NE52 1622 aa5.23□□□□□ -1.57
SEC23A-208ENST00000555017 TARBP1Q13395 1621 aaKnown RBP5.23□□□□□ -1.57
SEC23A-208ENST00000555017 TDRD9Q8NDG6 1382 aaKnown RBP5.22□□□□□ -1.57
SEC23A-208ENST00000555017 RFC5P40937 340 aa5.22□□□□□ -1.57
SEC23A-208ENST00000555017 LINC01559Q495D7 138 aa5.22□□□□□ -1.57
SEC23A-208ENST00000555017 PPP2R2DQ66LE6 453 aa5.22□□□□□ -1.57
SEC23A-208ENST00000555017 PCMTD1Q96MG8 357 aaPredicted RBP5.22□□□□□ -1.57
SEC23A-208ENST00000555017 HMX1Q9NP08 348 aaPredicted RBP5.22□□□□□ -1.57
SEC23A-208ENST00000555017 EVA1BQ9NVM1 165 aa5.22□□□□□ -1.57
SEC23A-208ENST00000555017 AQRO60306 1485 aaKnown RBP eCLIP5.21□□□□□ -1.582e-7■■■■□ 21.3
SEC23A-208ENST00000555017 SPDYE5A6NIY4 337 aa5.21□□□□□ -1.58
SEC23A-208ENST00000555017 TNFRSF10AO00220 468 aa5.21□□□□□ -1.58
SEC23A-208ENST00000555017 AP1G2O75843 785 aa5.21□□□□□ -1.58
SEC23A-208ENST00000555017 F12P00748 615 aaPredicted RBP5.21□□□□□ -1.58
SEC23A-208ENST00000555017 CTHP32929 405 aa5.21□□□□□ -1.58
SEC23A-208ENST00000555017 CCNYL3P0C7X3 344 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 KCNH2Q12809 1159 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 FOXC1Q12948 553 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 NR6A1Q15406 480 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 PTPRNQ16849 979 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 ZNF697Q5TEC3 545 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 DESI1Q6ICB0 168 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 ZNF598Q86UK7 904 aaKnown RBP5.2□□□□□ -1.58
SEC23A-208ENST00000555017 BAP1Q92560 729 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 UNC93B1Q9H1C4 597 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 GOPCQ9HD26 462 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 PKD2L1Q9P0L9 805 aa5.2□□□□□ -1.58
SEC23A-208ENST00000555017 V9GY48 417 aaPredicted RBP5.2□□□□□ -1.58
SEC23A-208ENST00000555017 TRIM32Q13049 653 aa5.19□□□□□ -1.58
SEC23A-208ENST00000555017 SNRKQ9NRH2 765 aa5.19□□□□□ -1.58
SEC23A-208ENST00000555017 PBRM1Q86U86 1689 aa5.18□□□□□ -1.58
SEC23A-208ENST00000555017 GDF9O60383 454 aa5.18□□□□□ -1.58
SEC23A-208ENST00000555017 RPIAP49247 311 aa5.18□□□□□ -1.58
SEC23A-208ENST00000555017 SH3BP2P78314 561 aa5.18□□□□□ -1.58
SEC23A-208ENST00000555017 EIF4G3O43432 1585 aaKnown RBP5.17□□□□□ -1.58
SEC23A-208ENST00000555017 ABCA5Q8WWZ7 1642 aa5.17□□□□□ -1.58
SEC23A-208ENST00000555017 ZBTB24O43167 697 aaPredicted RBP5.17□□□□□ -1.58
SEC23A-208ENST00000555017 USP17L8P0C7I0 530 aa5.17□□□□□ -1.58
SEC23A-208ENST00000555017 RANGAP1P46060 587 aaPredicted RBP5.17□□□□□ -1.58
SEC23A-208ENST00000555017 C4orf48Q5BLP8 95 aa5.17□□□□□ -1.58
SEC23A-208ENST00000555017 FOXJ1Q92949 421 aa5.17□□□□□ -1.58
SEC23A-208ENST00000555017 TRIM34Q9BYJ4 488 aa5.17□□□□□ -1.58
SEC23A-208ENST00000555017 ABCA10Q8WWZ4 1543 aa5.17□□□□□ -1.58
SEC23A-208ENST00000555017 CD2BP2O95400 341 aaKnown RBP5.16□□□□□ -1.58
SEC23A-208ENST00000555017 RC3H1Q5TC82 1133 aaKnown RBP5.16□□□□□ -1.58
SEC23A-208ENST00000555017 HELBQ8NG08 1087 aaPredicted RBP5.16□□□□□ -1.58
SEC23A-208ENST00000555017 PDZRN3Q9UPQ7 1066 aa5.16□□□□□ -1.58
SEC23A-208ENST00000555017 IFT140Q96RY7 1462 aa5.15□□□□□ -1.58
SEC23A-208ENST00000555017 GJD4Q96KN9 370 aaPredicted RBP5.15□□□□□ -1.59
SEC23A-208ENST00000555017 MRGPRX2Q96LB1 330 aa5.15□□□□□ -1.59
SEC23A-208ENST00000555017 OCSTAMPQ9BR26 566 aa5.15□□□□□ -1.59
SEC23A-208ENST00000555017 IGF1RP08069 1367 aa5.15□□□□□ -1.59
SEC23A-208ENST00000555017 GAPVD1Q14C86 1478 aa5.14□□□□□ -1.59
SEC23A-208ENST00000555017 RAPGEF2Q9Y4G8 1499 aa5.14□□□□□ -1.59
SEC23A-208ENST00000555017 ZNF511Q8NB15 262 aa5.14□□□□□ -1.59
SEC23A-208ENST00000555017 MTMR14Q8NCE2 650 aa5.14□□□□□ -1.59
SEC23A-208ENST00000555017 CHD1O14646 1710 aa5.14□□□□□ -1.59
SEC23A-208ENST00000555017 KIF27Q86VH2 1401 aa5.14□□□□□ -1.59
SEC23A-208ENST00000555017 J3QL48 77 aa5.13□□□□□ -1.59
SEC23A-208ENST00000555017 SIAH2O43255 324 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms