RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 SIRT1Q96EB6 747 aa9.92□□□□□ -0.82
PCNX4-208ENST00000554534 NRAPQ86VF7 1730 aa9.91□□□□□ -0.82
PCNX4-208ENST00000554534 NWD2Q9ULI1 1742 aa9.91□□□□□ -0.82
PCNX4-208ENST00000554534 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
PCNX4-208ENST00000554534 TRPM3Q9HCF6 1732 aaPredicted RBP9.9□□□□□ -0.82
PCNX4-208ENST00000554534 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.82
PCNX4-208ENST00000554534 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.82
PCNX4-208ENST00000554534 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.82
PCNX4-208ENST00000554534 WASLO00401 505 aaPredicted RBP9.9□□□□□ -0.82
PCNX4-208ENST00000554534 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
PCNX4-208ENST00000554534 ARHGEF10O15013 1369 aa9.89□□□□□ -0.83
PCNX4-208ENST00000554534 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
PCNX4-208ENST00000554534 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
PCNX4-208ENST00000554534 ALS2Q96Q42 1657 aa9.88□□□□□ -0.83
PCNX4-208ENST00000554534 APBA3O96018 575 aa9.88□□□□□ -0.83
PCNX4-208ENST00000554534 NUDT16Q96DE0 195 aaKnown RBP9.88□□□□□ -0.83
PCNX4-208ENST00000554534 COL14A1Q05707 1796 aaKnown RBP9.88□□□□□ -0.83
PCNX4-208ENST00000554534 EVA1CP58658 441 aa9.87□□□□□ -0.83
PCNX4-208ENST00000554534 CDK19Q9BWU1 502 aa9.87□□□□□ -0.83
PCNX4-208ENST00000554534 RAB3GAP2Q9H2M9 1393 aa9.87□□□□□ -0.83
PCNX4-208ENST00000554534 ADGRB1O14514 1584 aa9.86□□□□□ -0.83
PCNX4-208ENST00000554534 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
PCNX4-208ENST00000554534 CAMKK2Q96RR4 588 aa9.86□□□□□ -0.83
PCNX4-208ENST00000554534 SPATA31A1Q5TZJ5 1347 aa9.85□□□□□ -0.83
PCNX4-208ENST00000554534 RGPD1P0DJD0 1748 aa9.85□□□□□ -0.83
PCNX4-208ENST00000554534 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
PCNX4-208ENST00000554534 CRYBG1Q9Y4K1 1723 aa9.85□□□□□ -0.83
PCNX4-208ENST00000554534 LRP5O75197 1615 aa9.85□□□□□ -0.83
PCNX4-208ENST00000554534 ACEP12821 1306 aa9.84□□□□□ -0.83
PCNX4-208ENST00000554534 ANKARQ7Z5J8 1434 aa9.84□□□□□ -0.83
PCNX4-208ENST00000554534 DLC1Q96QB1 1528 aa9.84□□□□□ -0.83
PCNX4-208ENST00000554534 NBPF1Q3BBV0 1214 aa9.84□□□□□ -0.83
PCNX4-208ENST00000554534 NBPF8Q3BBV2 869 aa9.84□□□□□ -0.83
PCNX4-208ENST00000554534 PTF1AQ7RTS3 328 aa9.84□□□□□ -0.83
PCNX4-208ENST00000554534 TULP4Q9NRJ4 1543 aa9.83□□□□□ -0.84
PCNX4-208ENST00000554534 PDE3BQ13370 1112 aa9.83□□□□□ -0.84
PCNX4-208ENST00000554534 ABTB2Q8N961 1025 aa9.83□□□□□ -0.84
PCNX4-208ENST00000554534 CABP2Q9NPB3 220 aa9.83□□□□□ -0.84
PCNX4-208ENST00000554534 THSD7AQ9UPZ6 1657 aa9.83□□□□□ -0.84
PCNX4-208ENST00000554534 FAM196AQ6ZSG2 479 aa9.82□□□□□ -0.84
PCNX4-208ENST00000554534 ADGRB2O60241 1585 aa9.82□□□□□ -0.84
PCNX4-208ENST00000554534 PHRF1Q9P1Y6 1649 aaKnown RBP9.82□□□□□ -0.84
PCNX4-208ENST00000554534 CAMTA1Q9Y6Y1 1673 aa9.81□□□□□ -0.84
PCNX4-208ENST00000554534 SOX12O15370 315 aa9.81□□□□□ -0.84
PCNX4-208ENST00000554534 PDGFDQ9GZP0 370 aaPredicted RBP9.81□□□□□ -0.84
PCNX4-208ENST00000554534 ARHGEF28Q8N1W1 1705 aaKnown RBP9.81□□□□□ -0.84
PCNX4-208ENST00000554534 ATP7BP35670 1465 aa9.8□□□□□ -0.84
PCNX4-208ENST00000554534 SRPK2P78362 688 aaKnown RBP9.79□□□□□ -0.84
PCNX4-208ENST00000554534 SSH2Q76I76 1423 aa9.79□□□□□ -0.84
PCNX4-208ENST00000554534 GCP02774 474 aa9.78□□□□□ -0.84
PCNX4-208ENST00000554534 YY1P25490 414 aa9.78□□□□□ -0.84
PCNX4-208ENST00000554534 TCP11L2Q8N4U5 519 aa9.78□□□□□ -0.84
PCNX4-208ENST00000554534 PPP1R1BQ9UD71 204 aaPredicted RBP9.78□□□□□ -0.84
PCNX4-208ENST00000554534 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
PCNX4-208ENST00000554534 NUP188Q5SRE5 1749 aa9.78□□□□□ -0.84
PCNX4-208ENST00000554534 ITSN1Q15811 1721 aa9.77□□□□□ -0.85
PCNX4-208ENST00000554534 NBPF14Q5TI25 921 aa9.77□□□□□ -0.85
PCNX4-208ENST00000554534 CABP1Q9NZU7 370 aa9.77□□□□□ -0.85
PCNX4-208ENST00000554534 ATF5Q9Y2D1 282 aaPredicted RBP9.77□□□□□ -0.85
PCNX4-208ENST00000554534 EIF3AQ14152 1382 aaKnown RBP9.76□□□□□ -0.85
PCNX4-208ENST00000554534 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
PCNX4-208ENST00000554534 ZBTB7AO95365 584 aa9.76□□□□□ -0.85
PCNX4-208ENST00000554534 NLRP6P59044 892 aa9.76□□□□□ -0.85
PCNX4-208ENST00000554534 BARGINQ6ZT62 677 aa9.76□□□□□ -0.85
PCNX4-208ENST00000554534 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
PCNX4-208ENST00000554534 AXIN2Q9Y2T1 843 aa9.76□□□□□ -0.85
PCNX4-208ENST00000554534 NRKQ7Z2Y5 1582 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 DISP2A7MBM2 1401 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 PPIP5K1Q6PFW1 1433 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 RREB1Q92766 1687 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 KCNQ2O43526 872 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 TOM1L2Q6ZVM7 507 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 NLRP13Q86W25 1043 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 PROM2Q8N271 834 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 RGPD5Q99666 1765 aa9.75□□□□□ -0.85
PCNX4-208ENST00000554534 POLR3AO14802 1390 aaPredicted RBP9.75□□□□□ -0.85
PCNX4-208ENST00000554534 TOPAZ1Q8N9V7 1692 aa9.74□□□□□ -0.85
PCNX4-208ENST00000554534 SPON1Q9HCB6 807 aa9.74□□□□□ -0.85
PCNX4-208ENST00000554534 LMO7Q8WWI1 1683 aa9.74□□□□□ -0.85
PCNX4-208ENST00000554534 SBF2Q86WG5 1849 aa9.73□□□□□ -0.85
PCNX4-208ENST00000554534 MARCH10Q8NA82 808 aaPredicted RBP9.73□□□□□ -0.85
PCNX4-208ENST00000554534 BCL11BQ9C0K0 894 aaPredicted RBP9.73□□□□□ -0.85
PCNX4-208ENST00000554534 USP19O94966 1318 aa9.73□□□□□ -0.85
PCNX4-208ENST00000554534 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
PCNX4-208ENST00000554534 DDB1Q16531 1140 aa9.72□□□□□ -0.85
PCNX4-208ENST00000554534 ACSBG1Q96GR2 724 aa9.72□□□□□ -0.85
PCNX4-208ENST00000554534 SIN3AQ96ST3 1273 aa9.72□□□□□ -0.85
PCNX4-208ENST00000554534 CENPJQ9HC77 1338 aaPredicted RBP9.72□□□□□ -0.85
PCNX4-208ENST00000554534 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.86
PCNX4-208ENST00000554534 NEUROD1Q13562 356 aa9.71□□□□□ -0.86
PCNX4-208ENST00000554534 KAT6BQ8WYB5 2073 aa9.71□□□□□ -0.86
PCNX4-208ENST00000554534 CPDO75976 1380 aa9.7□□□□□ -0.86
PCNX4-208ENST00000554534 CRB1P82279 1406 aa9.7□□□□□ -0.86
PCNX4-208ENST00000554534 PEAK1Q9H792 1746 aa9.7□□□□□ -0.86
PCNX4-208ENST00000554534 PARP4Q9UKK3 1724 aaKnown RBP9.7□□□□□ -0.86
PCNX4-208ENST00000554534 LRRC37A3O60309 1634 aa9.69□□□□□ -0.86
PCNX4-208ENST00000554534 COL18A1P39060 1754 aa9.69□□□□□ -0.86
PCNX4-208ENST00000554534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.69□□□□□ -0.86
PCNX4-208ENST00000554534 L3MBTL2Q969R5 705 aa9.69□□□□□ -0.86
PCNX4-208ENST00000554534 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms