RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 RGL3Q3MIN7 710 aa9.86□□□□□ -0.83
GPHN-206ENST00000553936 FAM182BQ5T319 152 aa9.86□□□□□ -0.83
GPHN-206ENST00000553936 CAMKK2Q96RR4 588 aa9.86□□□□□ -0.83
GPHN-206ENST00000553936 DHX57Q6P158 1386 aaKnown RBP9.86□□□□□ -0.83
GPHN-206ENST00000553936 COL14A1Q05707 1796 aaKnown RBP9.86□□□□□ -0.83
GPHN-206ENST00000553936 ABCA3Q99758 1704 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 ANKARQ7Z5J8 1434 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 TRIM37O94972 964 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 SPON1Q9HCB6 807 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 PRDM11Q9NQV5 511 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 EIF3AQ14152 1382 aaKnown RBP9.85□□□□□ -0.83
GPHN-206ENST00000553936 NINLQ9Y2I6 1382 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 NRAPQ86VF7 1730 aa9.85□□□□□ -0.83
GPHN-206ENST00000553936 PIK3C2GO75747 1445 aa9.84□□□□□ -0.83
GPHN-206ENST00000553936 PDE3BQ13370 1112 aa9.84□□□□□ -0.83
GPHN-206ENST00000553936 PMFBP1Q8TBY8 1022 aa9.84□□□□□ -0.83
GPHN-206ENST00000553936 IFT172Q9UG01 1749 aa9.84□□□□□ -0.83
GPHN-206ENST00000553936 TNS1Q9HBL0 1735 aaKnown RBP9.83□□□□□ -0.84
GPHN-206ENST00000553936 C11orf95C9JLR9 678 aaPredicted RBP9.83□□□□□ -0.84
GPHN-206ENST00000553936 POGKQ9P215 609 aa9.83□□□□□ -0.84
GPHN-206ENST00000553936 KCNQ2O43526 872 aa9.82□□□□□ -0.84
GPHN-206ENST00000553936 PRAM1Q96QH2 718 aa9.82□□□□□ -0.84
GPHN-206ENST00000553936 C14orf93Q9H972 538 aaKnown RBP9.82□□□□□ -0.84
GPHN-206ENST00000553936 THSD7AQ9UPZ6 1657 aa9.82□□□□□ -0.84
GPHN-206ENST00000553936 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
GPHN-206ENST00000553936 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
GPHN-206ENST00000553936 EVA1CP58658 441 aa9.81□□□□□ -0.84
GPHN-206ENST00000553936 SAFB2Q14151 953 aaKnown RBP eCLIP9.81□□□□□ -0.84
GPHN-206ENST00000553936 STRN4Q9NRL3 753 aa9.81□□□□□ -0.84
GPHN-206ENST00000553936 SPATA31E1Q6ZUB1 1445 aa9.81□□□□□ -0.84
GPHN-206ENST00000553936 ACIN1Q9UKV3 1341 aaKnown RBP9.81□□□□□ -0.84
GPHN-206ENST00000553936 RGPD8O14715 1765 aaPredicted RBP9.8□□□□□ -0.84
GPHN-206ENST00000553936 BARGINQ6ZT62 677 aa9.8□□□□□ -0.84
GPHN-206ENST00000553936 NGDNQ8NEJ9 315 aaKnown RBP9.8□□□□□ -0.84
GPHN-206ENST00000553936 USP35Q9P2H5 1018 aa9.79□□□□□ -0.84
GPHN-206ENST00000553936 DLC1Q96QB1 1528 aa9.78□□□□□ -0.84
GPHN-206ENST00000553936 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
GPHN-206ENST00000553936 RREB1Q92766 1687 aa9.77□□□□□ -0.84
GPHN-206ENST00000553936 ALS2Q96Q42 1657 aa9.77□□□□□ -0.84
GPHN-206ENST00000553936 KIAA0232Q92628 1395 aa9.77□□□□□ -0.84
GPHN-206ENST00000553936 CFAP70Q5T0N1 1121 aa9.77□□□□□ -0.85
GPHN-206ENST00000553936 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.85
GPHN-206ENST00000553936 TCP11L2Q8N4U5 519 aa9.77□□□□□ -0.85
GPHN-206ENST00000553936 THRAP3Q9Y2W1 955 aaKnown RBP9.77□□□□□ -0.85
GPHN-206ENST00000553936 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
GPHN-206ENST00000553936 CHRNA2Q15822 529 aa9.76□□□□□ -0.85
GPHN-206ENST00000553936 TULP4Q9NRJ4 1543 aa9.76□□□□□ -0.85
GPHN-206ENST00000553936 NUP188Q5SRE5 1749 aa9.76□□□□□ -0.85
GPHN-206ENST00000553936 ATP7BP35670 1465 aa9.75□□□□□ -0.85
GPHN-206ENST00000553936 WASLO00401 505 aaPredicted RBP9.75□□□□□ -0.85
GPHN-206ENST00000553936 ZNF784Q8NCA9 323 aaPredicted RBP9.75□□□□□ -0.85
GPHN-206ENST00000553936 MPHOSPH9Q99550 1183 aa9.75□□□□□ -0.85
GPHN-206ENST00000553936 HIRIP3Q9BW71 556 aaPredicted RBP9.75□□□□□ -0.85
GPHN-206ENST00000553936 SSH2Q76I76 1423 aa9.74□□□□□ -0.85
GPHN-206ENST00000553936 PLSCR1O15162 318 aa9.74□□□□□ -0.85
GPHN-206ENST00000553936 ZC3H6P61129 1189 aaKnown RBP9.74□□□□□ -0.85
GPHN-206ENST00000553936 TRAK1Q9UPV9 953 aa9.74□□□□□ -0.85
GPHN-206ENST00000553936 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
GPHN-206ENST00000553936 PRR36Q9H6K5 1346 aa9.73□□□□□ -0.85
GPHN-206ENST00000553936 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
GPHN-206ENST00000553936 OVOS2A0A0J9YW53 1432 aa9.73□□□□□ -0.85
GPHN-206ENST00000553936 OVOS2Q6IE36 1432 aa9.73□□□□□ -0.85
GPHN-206ENST00000553936 C1QTNF8P60827 252 aa9.72□□□□□ -0.85
GPHN-206ENST00000553936 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
GPHN-206ENST00000553936 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
GPHN-206ENST00000553936 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
GPHN-206ENST00000553936 CRYBG1Q9Y4K1 1723 aa9.72□□□□□ -0.85
GPHN-206ENST00000553936 CPDO75976 1380 aa9.71□□□□□ -0.86
GPHN-206ENST00000553936 C1QBPQ07021 282 aaKnown RBP9.7□□□□□ -0.86
GPHN-206ENST00000553936 ABTB2Q8N961 1025 aa9.7□□□□□ -0.86
GPHN-206ENST00000553936 NUDT16Q96DE0 195 aaKnown RBP9.7□□□□□ -0.86
GPHN-206ENST00000553936 STAC3Q96MF2 364 aa9.7□□□□□ -0.86
GPHN-206ENST00000553936 STK32BQ9NY57 414 aa9.7□□□□□ -0.86
GPHN-206ENST00000553936 PHRF1Q9P1Y6 1649 aaKnown RBP9.7□□□□□ -0.86
GPHN-206ENST00000553936 ITSN1Q15811 1721 aa9.7□□□□□ -0.86
GPHN-206ENST00000553936 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
GPHN-206ENST00000553936 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
GPHN-206ENST00000553936 ZBTB7AO95365 584 aa9.69□□□□□ -0.86
GPHN-206ENST00000553936 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
GPHN-206ENST00000553936 DDB1Q16531 1140 aa9.69□□□□□ -0.86
GPHN-206ENST00000553936 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
GPHN-206ENST00000553936 NRKQ7Z2Y5 1582 aa9.69□□□□□ -0.86
GPHN-206ENST00000553936 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
GPHN-206ENST00000553936 CAMTA1Q9Y6Y1 1673 aa9.68□□□□□ -0.86
GPHN-206ENST00000553936 ADGRB1O14514 1584 aa9.68□□□□□ -0.86
GPHN-206ENST00000553936 CRB1P82279 1406 aa9.68□□□□□ -0.86
GPHN-206ENST00000553936 SYT17Q9BSW7 474 aa9.68□□□□□ -0.86
GPHN-206ENST00000553936 CDCA7Q9BWT1 371 aaPredicted RBP9.68□□□□□ -0.86
GPHN-206ENST00000553936 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
GPHN-206ENST00000553936 MTFR1LQ9H019 292 aa9.68□□□□□ -0.86
GPHN-206ENST00000553936 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
GPHN-206ENST00000553936 PARP4Q9UKK3 1724 aaKnown RBP9.68□□□□□ -0.86
GPHN-206ENST00000553936 POLR3AO14802 1390 aaPredicted RBP9.67□□□□□ -0.86
GPHN-206ENST00000553936 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
GPHN-206ENST00000553936 ANO8Q9HCE9 1232 aaPredicted RBP9.67□□□□□ -0.86
GPHN-206ENST00000553936 ATF5Q9Y2D1 282 aaPredicted RBP9.67□□□□□ -0.86
GPHN-206ENST00000553936 COL5A2P05997 1499 aaPredicted RBP9.66□□□□□ -0.86
GPHN-206ENST00000553936 CASZ1Q86V15 1759 aa9.66□□□□□ -0.86
GPHN-206ENST00000553936 ACEP12821 1306 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms