RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
CHD8-206ENST00000553870 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
CHD8-206ENST00000553870 CPSF1Q10570 1443 aaKnown RBP13.04□□□□□ -0.32
CHD8-206ENST00000553870 LRP6O75581 1613 aa13.03□□□□□ -0.32
CHD8-206ENST00000553870 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
CHD8-206ENST00000553870 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
CHD8-206ENST00000553870 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
CHD8-206ENST00000553870 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
CHD8-206ENST00000553870 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
CHD8-206ENST00000553870 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
CHD8-206ENST00000553870 NLRP13Q86W25 1043 aa13.02□□□□□ -0.33
CHD8-206ENST00000553870 NGLY1Q96IV0 654 aa13.02□□□□□ -0.33
CHD8-206ENST00000553870 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
CHD8-206ENST00000553870 TTC21AQ8NDW8 1320 aa13.02□□□□□ -0.33
CHD8-206ENST00000553870 USP6P35125 1406 aa13.02□□□□□ -0.33
CHD8-206ENST00000553870 SSH2Q76I76 1423 aa13.02□□□□□ -0.33
CHD8-206ENST00000553870 ADRA2BP18089 450 aa13.01□□□□□ -0.33
CHD8-206ENST00000553870 FNBP4Q8N3X1 1017 aaPredicted RBP13.01□□□□□ -0.33
CHD8-206ENST00000553870 ALS2Q96Q42 1657 aa13□□□□□ -0.33
CHD8-206ENST00000553870 KTN1Q86UP2 1357 aaKnown RBP13□□□□□ -0.33
CHD8-206ENST00000553870 TTC21BQ7Z4L5 1316 aa13□□□□□ -0.33
CHD8-206ENST00000553870 CABLES1Q8TDN4 633 aa13□□□□□ -0.33
CHD8-206ENST00000553870 C8orf37Q96NL8 207 aa13□□□□□ -0.33
CHD8-206ENST00000553870 AFF2P51816 1311 aa12.98□□□□□ -0.33
CHD8-206ENST00000553870 NLRP6P59044 892 aa12.98□□□□□ -0.33
CHD8-206ENST00000553870 USP21Q9UK80 565 aa12.97□□□□□ -0.33
CHD8-206ENST00000553870 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
CHD8-206ENST00000553870 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.33
CHD8-206ENST00000553870 ANKRD36BQ8N2N9 1353 aa12.96□□□□□ -0.33
CHD8-206ENST00000553870 USP19O94966 1318 aa12.96□□□□□ -0.33
CHD8-206ENST00000553870 GCP02774 474 aa12.96□□□□□ -0.33
CHD8-206ENST00000553870 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.33
CHD8-206ENST00000553870 AKAP12Q02952 1782 aa12.96□□□□□ -0.34
CHD8-206ENST00000553870 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
CHD8-206ENST00000553870 FAM83GA6ND36 823 aa12.95□□□□□ -0.34
CHD8-206ENST00000553870 POTEAQ6S8J7 498 aa12.95□□□□□ -0.34
CHD8-206ENST00000553870 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
CHD8-206ENST00000553870 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
CHD8-206ENST00000553870 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
CHD8-206ENST00000553870 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
CHD8-206ENST00000553870 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
CHD8-206ENST00000553870 UNC5CLQ8IV45 518 aa12.94□□□□□ -0.34
CHD8-206ENST00000553870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHD8-206ENST00000553870 SLIT2O94813 1529 aa12.93□□□□□ -0.34
CHD8-206ENST00000553870 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
CHD8-206ENST00000553870 RXRBP28702 533 aa12.93□□□□□ -0.34
CHD8-206ENST00000553870 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
CHD8-206ENST00000553870 PRDM11Q9NQV5 511 aa12.93□□□□□ -0.34
CHD8-206ENST00000553870 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
CHD8-206ENST00000553870 CPDO75976 1380 aa12.93□□□□□ -0.34
CHD8-206ENST00000553870 ILDR2Q71H61 639 aa12.92□□□□□ -0.34
CHD8-206ENST00000553870 MON2Q7Z3U7 1717 aa12.92□□□□□ -0.34
CHD8-206ENST00000553870 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
CHD8-206ENST00000553870 ZC3H6P61129 1189 aaKnown RBP12.91□□□□□ -0.34
CHD8-206ENST00000553870 KIAA0232Q92628 1395 aa12.91□□□□□ -0.34
CHD8-206ENST00000553870 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
CHD8-206ENST00000553870 VPS72Q15906 364 aa12.9□□□□□ -0.34
CHD8-206ENST00000553870 NME9Q86XW9 330 aa12.9□□□□□ -0.34
CHD8-206ENST00000553870 BTG4Q9NY30 223 aa12.9□□□□□ -0.34
CHD8-206ENST00000553870 ABCA3Q99758 1704 aa12.9□□□□□ -0.34
CHD8-206ENST00000553870 CRYBG1Q9Y4K1 1723 aa12.9□□□□□ -0.34
CHD8-206ENST00000553870 ATRNO75882 1429 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 SLIT3O75094 1523 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 FYB1O15117 783 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 ARHGEF25Q86VW2 580 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 COG3Q96JB2 828 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
CHD8-206ENST00000553870 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
CHD8-206ENST00000553870 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
CHD8-206ENST00000553870 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
CHD8-206ENST00000553870 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
CHD8-206ENST00000553870 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
CHD8-206ENST00000553870 PANK3Q9H999 370 aa12.87□□□□□ -0.35
CHD8-206ENST00000553870 NWD2Q9ULI1 1742 aa12.87□□□□□ -0.35
CHD8-206ENST00000553870 PHRF1Q9P1Y6 1649 aaKnown RBP12.87□□□□□ -0.35
CHD8-206ENST00000553870 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
CHD8-206ENST00000553870 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
CHD8-206ENST00000553870 EVA1CP58658 441 aa12.86□□□□□ -0.35
CHD8-206ENST00000553870 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
CHD8-206ENST00000553870 OVOS2A0A0J9YW53 1432 aa12.86□□□□□ -0.35
CHD8-206ENST00000553870 OVOS2Q6IE36 1432 aa12.86□□□□□ -0.35
CHD8-206ENST00000553870 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
CHD8-206ENST00000553870 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
CHD8-206ENST00000553870 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
CHD8-206ENST00000553870 MYOM1P52179 1685 aa12.84□□□□□ -0.35
CHD8-206ENST00000553870 CCDC9Q9Y3X0 531 aaKnown RBP12.84□□□□□ -0.35
CHD8-206ENST00000553870 NSD3Q9BZ95 1437 aa12.84□□□□□ -0.35
CHD8-206ENST00000553870 SPATA31A5Q5VU36 1347 aa12.84□□□□□ -0.35
CHD8-206ENST00000553870 SPATA31A7Q8IWB4 1347 aa12.84□□□□□ -0.35
CHD8-206ENST00000553870 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
CHD8-206ENST00000553870 SOCS7O14512 581 aa12.83□□□□□ -0.36
CHD8-206ENST00000553870 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
CHD8-206ENST00000553870 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.36
CHD8-206ENST00000553870 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
CHD8-206ENST00000553870 SOX12O15370 315 aa12.82□□□□□ -0.36
CHD8-206ENST00000553870 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
CHD8-206ENST00000553870 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms