RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ATAD2Q6PL18 1390 aa28.82■■■□□ 2.2
FOXA1-203ENST00000553751 PLEKHG5O94827 1062 aa28.81■■■□□ 2.2
FOXA1-203ENST00000553751 USP47Q96K76 1375 aa28.8■■■□□ 2.2
FOXA1-203ENST00000553751 ST20-MTHFSA0A0A6YYL1 179 aa28.79■■■□□ 2.2
FOXA1-203ENST00000553751 HAP1P54257 671 aaPredicted RBP28.79■■■□□ 2.2
FOXA1-203ENST00000553751 TESK2Q96S53 571 aa28.79■■■□□ 2.2
FOXA1-203ENST00000553751 USP6P35125 1406 aa28.78■■■□□ 2.2
FOXA1-203ENST00000553751 USP21Q9UK80 565 aa28.78■■■□□ 2.2
FOXA1-203ENST00000553751 BCL9LQ86UU0 1499 aa28.78■■■□□ 2.2
FOXA1-203ENST00000553751 SLIT2O94813 1529 aa28.77■■■□□ 2.2
FOXA1-203ENST00000553751 BRD4O60885 1362 aaPredicted RBP28.76■■■□□ 2.2
FOXA1-203ENST00000553751 PHRF1Q9P1Y6 1649 aaKnown RBP28.76■■■□□ 2.19
FOXA1-203ENST00000553751 AKAP12Q02952 1782 aa28.75■■■□□ 2.19
FOXA1-203ENST00000553751 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.74■■■□□ 2.19
FOXA1-203ENST00000553751 PLCH1Q4KWH8 1693 aa28.74■■■□□ 2.19
FOXA1-203ENST00000553751 QTRT2Q9H974 415 aaKnown RBP28.74■■■□□ 2.19
FOXA1-203ENST00000553751 ATRNO75882 1429 aa28.74■■■□□ 2.19
FOXA1-203ENST00000553751 SSH2Q76I76 1423 aa28.74■■■□□ 2.19
FOXA1-203ENST00000553751 RXRBP28702 533 aa28.73■■■□□ 2.19
FOXA1-203ENST00000553751 CPSF1Q10570 1443 aaKnown RBP28.72■■■□□ 2.19
FOXA1-203ENST00000553751 CDK12Q9NYV4 1490 aaPredicted RBP28.72■■■□□ 2.19
FOXA1-203ENST00000553751 NRKQ7Z2Y5 1582 aa28.71■■■□□ 2.19
FOXA1-203ENST00000553751 NUTM2GQ5VZR2 741 aa28.71■■■□□ 2.19
FOXA1-203ENST00000553751 NWD2Q9ULI1 1742 aa28.7■■■□□ 2.19
FOXA1-203ENST00000553751 ABTB2Q8N961 1025 aa28.7■■■□□ 2.18
FOXA1-203ENST00000553751 TRPC5Q9UL62 973 aaPredicted RBP28.7■■■□□ 2.18
FOXA1-203ENST00000553751 RBM6P78332 1123 aaKnown RBP28.69■■■□□ 2.18
FOXA1-203ENST00000553751 PUS7Q96PZ0 661 aaKnown RBP28.69■■■□□ 2.18
FOXA1-203ENST00000553751 CD163L1Q9NR16 1453 aa28.69■■■□□ 2.18
FOXA1-203ENST00000553751 MON2Q7Z3U7 1717 aa28.69■■■□□ 2.18
FOXA1-203ENST00000553751 USP19O94966 1318 aa28.68■■■□□ 2.18
FOXA1-203ENST00000553751 COL14A1Q05707 1796 aaKnown RBP28.67■■■□□ 2.18
FOXA1-203ENST00000553751 PIK3C2AO00443 1686 aa28.67■■■□□ 2.18
FOXA1-203ENST00000553751 FAM83GA6ND36 823 aa28.67■■■□□ 2.18
FOXA1-203ENST00000553751 ZNF692Q9BU19 519 aaPredicted RBP28.67■■■□□ 2.18
FOXA1-203ENST00000553751 SLC24A1O60721 1099 aa28.66■■■□□ 2.18
FOXA1-203ENST00000553751 UNC5CLQ8IV45 518 aa28.66■■■□□ 2.18
FOXA1-203ENST00000553751 RGS12O14924 1447 aa28.66■■■□□ 2.18
FOXA1-203ENST00000553751 KTN1Q86UP2 1357 aaKnown RBP28.64■■■□□ 2.18
FOXA1-203ENST00000553751 NRAPQ86VF7 1730 aa28.64■■■□□ 2.18
FOXA1-203ENST00000553751 TMC1Q8TDI8 760 aa28.63■■■□□ 2.17
FOXA1-203ENST00000553751 TTC21BQ7Z4L5 1316 aa28.63■■■□□ 2.17
FOXA1-203ENST00000553751 NLRP13Q86W25 1043 aa28.62■■■□□ 2.17
FOXA1-203ENST00000553751 SLC12A5Q9H2X9 1139 aa28.62■■■□□ 2.17
FOXA1-203ENST00000553751 KIAA0232Q92628 1395 aa28.62■■■□□ 2.17
FOXA1-203ENST00000553751 SLIT3O75094 1523 aa28.61■■■□□ 2.17
FOXA1-203ENST00000553751 NINLQ9Y2I6 1382 aa28.61■■■□□ 2.17
FOXA1-203ENST00000553751 GLI3P10071 1580 aa28.6■■■□□ 2.17
FOXA1-203ENST00000553751 TMF1P82094 1093 aa28.6■■■□□ 2.17
FOXA1-203ENST00000553751 PRDM11Q9NQV5 511 aa28.6■■■□□ 2.17
FOXA1-203ENST00000553751 TTC21AQ8NDW8 1320 aa28.59■■■□□ 2.17
FOXA1-203ENST00000553751 A0A1W2PP64 1363 aa28.59■■■□□ 2.17
FOXA1-203ENST00000553751 NLRP6P59044 892 aa28.58■■■□□ 2.17
FOXA1-203ENST00000553751 GJD4Q96KN9 370 aaPredicted RBP28.58■■■□□ 2.17
FOXA1-203ENST00000553751 BTG4Q9NY30 223 aa28.57■■■□□ 2.16
FOXA1-203ENST00000553751 CPDO75976 1380 aa28.57■■■□□ 2.16
FOXA1-203ENST00000553751 ZC3H6P61129 1189 aaKnown RBP28.56■■■□□ 2.16
FOXA1-203ENST00000553751 VPS72Q15906 364 aa28.56■■■□□ 2.16
FOXA1-203ENST00000553751 HDGFL2Q7Z4V5 671 aaPredicted RBP28.56■■■□□ 2.16
FOXA1-203ENST00000553751 GCP02774 474 aa28.55■■■□□ 2.16
FOXA1-203ENST00000553751 EDC4Q6P2E9 1401 aaKnown RBP28.54■■■□□ 2.16
FOXA1-203ENST00000553751 TERF2IPQ9NYB0 399 aa28.54■■■□□ 2.16
FOXA1-203ENST00000553751 CHRNA2Q15822 529 aa28.53■■■□□ 2.16
FOXA1-203ENST00000553751 USP54Q70EL1 1684 aa28.53■■■□□ 2.16
FOXA1-203ENST00000553751 LMO7Q8WWI1 1683 aa28.53■■■□□ 2.16
FOXA1-203ENST00000553751 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.51■■■□□ 2.15
FOXA1-203ENST00000553751 USP31Q70CQ4 1352 aa28.5■■■□□ 2.15
FOXA1-203ENST00000553751 CDCA8Q53HL2 280 aa28.49■■■□□ 2.15
FOXA1-203ENST00000553751 ANKRD36BQ8N2N9 1353 aa28.49■■■□□ 2.15
FOXA1-203ENST00000553751 MYOM1P52179 1685 aa28.48■■■□□ 2.15
FOXA1-203ENST00000553751 EIF4G2P78344 907 aaKnown RBP eCLIP28.48■■■□□ 2.15
FOXA1-203ENST00000553751 CAMTA1Q9Y6Y1 1673 aa28.48■■■□□ 2.15
FOXA1-203ENST00000553751 HSPA5P11021 654 aaKnown RBP28.47■■■□□ 2.15
FOXA1-203ENST00000553751 NME9Q86XW9 330 aa28.47■■■□□ 2.15
FOXA1-203ENST00000553751 NFAT5O94916 1531 aa28.47■■■□□ 2.15
FOXA1-203ENST00000553751 ZRANB1Q9UGI0 708 aa28.46■■■□□ 2.15
FOXA1-203ENST00000553751 CCDC9Q9Y3X0 531 aaKnown RBP28.46■■■□□ 2.15
FOXA1-203ENST00000553751 KCNH5Q8NCM2 988 aa28.43■■■□□ 2.14
FOXA1-203ENST00000553751 OVOS2A0A0J9YW53 1432 aa28.43■■■□□ 2.14
FOXA1-203ENST00000553751 OVOS2Q6IE36 1432 aa28.43■■■□□ 2.14
FOXA1-203ENST00000553751 SPATA31A5Q5VU36 1347 aa28.43■■■□□ 2.14
FOXA1-203ENST00000553751 SPATA31A7Q8IWB4 1347 aa28.43■■■□□ 2.14
FOXA1-203ENST00000553751 COL18A1P39060 1754 aa28.42■■■□□ 2.14
FOXA1-203ENST00000553751 AATKQ6ZMQ8 1374 aa28.42■■■□□ 2.14
FOXA1-203ENST00000553751 STRN4Q9NRL3 753 aa28.41■■■□□ 2.14
FOXA1-203ENST00000553751 COL5A2P05997 1499 aaPredicted RBP28.4■■■□□ 2.14
FOXA1-203ENST00000553751 ONECUT3O60422 494 aaPredicted RBP28.4■■■□□ 2.14
FOXA1-203ENST00000553751 SOX12O15370 315 aa28.39■■■□□ 2.14
FOXA1-203ENST00000553751 ZBTB7CA1YPR0 619 aa28.38■■■□□ 2.13
FOXA1-203ENST00000553751 ARHGEF25Q86VW2 580 aa28.38■■■□□ 2.13
FOXA1-203ENST00000553751 BRWD3Q6RI45 1802 aa28.37■■■□□ 2.13
FOXA1-203ENST00000553751 SEPT12Q8IYM1 358 aa28.37■■■□□ 2.13
FOXA1-203ENST00000553751 UPF1Q92900 1129 aaKnown RBP eCLIP28.37■■■□□ 2.13
FOXA1-203ENST00000553751 SPATA31A1Q5TZJ5 1347 aa28.37■■■□□ 2.13
FOXA1-203ENST00000553751 THSD7AQ9UPZ6 1657 aa28.36■■■□□ 2.13
FOXA1-203ENST00000553751 ABCC6O95255 1503 aa28.35■■■□□ 2.13
FOXA1-203ENST00000553751 FAM98CQ17RN3 349 aaKnown RBP28.35■■■□□ 2.13
FOXA1-203ENST00000553751 EVA1CP58658 441 aa28.34■■■□□ 2.13
FOXA1-203ENST00000553751 LARP1Q6PKG0 1096 aaKnown RBP28.34■■■□□ 2.13
FOXA1-203ENST00000553751 AXIN2Q9Y2T1 843 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms