RNA–Protein interactions for RNA: ENST00000553446.1

LRP1-205, Transcript of LDL receptor related protein 1, humanhuman

TSL 5

Gene LRP1, Length 292 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-205ENST00000553446 NGLY1Q96IV0 654 aa9.48□□□□□ -0.89
LRP1-205ENST00000553446 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
LRP1-205ENST00000553446 COL22A1Q8NFW1 1626 aaPredicted RBP9.47□□□□□ -0.89
LRP1-205ENST00000553446 HAP1P54257 671 aaPredicted RBP9.47□□□□□ -0.89
LRP1-205ENST00000553446 CD163L1Q9NR16 1453 aa9.47□□□□□ -0.89
LRP1-205ENST00000553446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
LRP1-205ENST00000553446 ABTB2Q8N961 1025 aa9.46□□□□□ -0.9
LRP1-205ENST00000553446 ARHGEF10O15013 1369 aa9.46□□□□□ -0.9
LRP1-205ENST00000553446 ATAD2Q6PL18 1390 aa9.46□□□□□ -0.9
LRP1-205ENST00000553446 USP6P35125 1406 aa9.46□□□□□ -0.9
LRP1-205ENST00000553446 ALS2Q96Q42 1657 aa9.45□□□□□ -0.9
LRP1-205ENST00000553446 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
LRP1-205ENST00000553446 FAM83GA6ND36 823 aa9.45□□□□□ -0.9
LRP1-205ENST00000553446 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
LRP1-205ENST00000553446 ZC3H6P61129 1189 aaKnown RBP9.45□□□□□ -0.9
LRP1-205ENST00000553446 POLR3GLQ9BT43 218 aa9.45□□□□□ -0.9
LRP1-205ENST00000553446 USP21Q9UK80 565 aa9.45□□□□□ -0.9
LRP1-205ENST00000553446 TTC21BQ7Z4L5 1316 aa9.45□□□□□ -0.9
LRP1-205ENST00000553446 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
LRP1-205ENST00000553446 ZBTB7CA1YPR0 619 aa9.44□□□□□ -0.9
LRP1-205ENST00000553446 SOX12O15370 315 aa9.44□□□□□ -0.9
LRP1-205ENST00000553446 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
LRP1-205ENST00000553446 TMF1P82094 1093 aa9.44□□□□□ -0.9
LRP1-205ENST00000553446 CHRNA2Q15822 529 aa9.44□□□□□ -0.9
LRP1-205ENST00000553446 NME9Q86XW9 330 aa9.44□□□□□ -0.9
LRP1-205ENST00000553446 QTRT2Q9H974 415 aaKnown RBP9.44□□□□□ -0.9
LRP1-205ENST00000553446 A0A1W2PP64 1363 aa9.44□□□□□ -0.9
LRP1-205ENST00000553446 KTN1Q86UP2 1357 aaKnown RBP9.44□□□□□ -0.9
LRP1-205ENST00000553446 CPSF1Q10570 1443 aaKnown RBP9.44□□□□□ -0.9
LRP1-205ENST00000553446 BCL9LQ86UU0 1499 aa9.43□□□□□ -0.9
LRP1-205ENST00000553446 NLRP6P59044 892 aa9.43□□□□□ -0.9
LRP1-205ENST00000553446 ZNF772Q68DY9 489 aaPredicted RBP9.43□□□□□ -0.9
LRP1-205ENST00000553446 FNBP4Q8N3X1 1017 aaPredicted RBP9.43□□□□□ -0.9
LRP1-205ENST00000553446 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
LRP1-205ENST00000553446 ABCA3Q99758 1704 aa9.42□□□□□ -0.9
LRP1-205ENST00000553446 USP19O94966 1318 aa9.41□□□□□ -0.9
LRP1-205ENST00000553446 FBLN1P23142 703 aa9.41□□□□□ -0.9
LRP1-205ENST00000553446 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
LRP1-205ENST00000553446 ZNF692Q9BU19 519 aaPredicted RBP9.41□□□□□ -0.9
LRP1-205ENST00000553446 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
LRP1-205ENST00000553446 PRDM11Q9NQV5 511 aa9.41□□□□□ -0.9
LRP1-205ENST00000553446 BTG4Q9NY30 223 aa9.41□□□□□ -0.9
LRP1-205ENST00000553446 CRYBG1Q9Y4K1 1723 aa9.41□□□□□ -0.9
LRP1-205ENST00000553446 SLIT2O94813 1529 aa9.41□□□□□ -0.9
LRP1-205ENST00000553446 PIK3C2AO00443 1686 aa9.4□□□□□ -0.9
LRP1-205ENST00000553446 GCP02774 474 aa9.4□□□□□ -0.9
LRP1-205ENST00000553446 RXRBP28702 533 aa9.4□□□□□ -0.9
LRP1-205ENST00000553446 NLRP13Q86W25 1043 aa9.4□□□□□ -0.9
LRP1-205ENST00000553446 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.9
LRP1-205ENST00000553446 PUS7Q96PZ0 661 aaKnown RBP9.4□□□□□ -0.9
LRP1-205ENST00000553446 ATRNO75882 1429 aa9.39□□□□□ -0.91
LRP1-205ENST00000553446 PHRF1Q9P1Y6 1649 aaKnown RBP9.39□□□□□ -0.91
LRP1-205ENST00000553446 NRKQ7Z2Y5 1582 aa9.39□□□□□ -0.91
LRP1-205ENST00000553446 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
LRP1-205ENST00000553446 AKAP12Q02952 1782 aa9.39□□□□□ -0.91
LRP1-205ENST00000553446 RBM6P78332 1123 aaKnown RBP9.38□□□□□ -0.91
LRP1-205ENST00000553446 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
LRP1-205ENST00000553446 STRN4Q9NRL3 753 aa9.38□□□□□ -0.91
LRP1-205ENST00000553446 TRPC5Q9UL62 973 aaPredicted RBP9.38□□□□□ -0.91
LRP1-205ENST00000553446 AXIN2Q9Y2T1 843 aa9.38□□□□□ -0.91
LRP1-205ENST00000553446 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
LRP1-205ENST00000553446 EDC4Q6P2E9 1401 aaKnown RBP9.38□□□□□ -0.91
LRP1-205ENST00000553446 ANKRD36BQ8N2N9 1353 aa9.37□□□□□ -0.91
LRP1-205ENST00000553446 TTC21AQ8NDW8 1320 aa9.37□□□□□ -0.91
LRP1-205ENST00000553446 MARF1Q9Y4F3 1742 aaKnown RBP9.37□□□□□ -0.91
LRP1-205ENST00000553446 PLCH1Q4KWH8 1693 aa9.37□□□□□ -0.91
LRP1-205ENST00000553446 GJD4Q96KN9 370 aaPredicted RBP9.37□□□□□ -0.91
LRP1-205ENST00000553446 RGS12O14924 1447 aa9.37□□□□□ -0.91
LRP1-205ENST00000553446 BRD4O60885 1362 aaPredicted RBP9.37□□□□□ -0.91
LRP1-205ENST00000553446 MON2Q7Z3U7 1717 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 SLIT3O75094 1523 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 KIF7Q2M1P5 1343 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 MYOM1P52179 1685 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 FYB1O15117 783 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 CDCA8Q53HL2 280 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
LRP1-205ENST00000553446 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 GLI3P10071 1580 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 CAMTA1Q9Y6Y1 1673 aa9.36□□□□□ -0.91
LRP1-205ENST00000553446 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 VPS72Q15906 364 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 ARHGEF25Q86VW2 580 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 NSD3Q9BZ95 1437 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 PANK3Q9H999 370 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 CPDO75976 1380 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 USP31Q70CQ4 1352 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 NINLQ9Y2I6 1382 aa9.35□□□□□ -0.91
LRP1-205ENST00000553446 CDK12Q9NYV4 1490 aaPredicted RBP9.34□□□□□ -0.91
LRP1-205ENST00000553446 OVOS2A0A0J9YW53 1432 aa9.34□□□□□ -0.91
LRP1-205ENST00000553446 OVOS2Q6IE36 1432 aa9.34□□□□□ -0.91
LRP1-205ENST00000553446 FAM98CQ17RN3 349 aaKnown RBP9.34□□□□□ -0.91
LRP1-205ENST00000553446 NFAT5O94916 1531 aa9.34□□□□□ -0.91
LRP1-205ENST00000553446 COL14A1Q05707 1796 aaKnown RBP9.34□□□□□ -0.91
LRP1-205ENST00000553446 NRAPQ86VF7 1730 aa9.34□□□□□ -0.92
LRP1-205ENST00000553446 EVA1CP58658 441 aa9.33□□□□□ -0.92
LRP1-205ENST00000553446 RRS1Q15050 365 aaKnown RBP9.33□□□□□ -0.92
LRP1-205ENST00000553446 FAM182BQ5T319 152 aa9.33□□□□□ -0.92
LRP1-205ENST00000553446 SEPT12Q8IYM1 358 aa9.33□□□□□ -0.92
LRP1-205ENST00000553446 COG3Q96JB2 828 aa9.33□□□□□ -0.92
LRP1-205ENST00000553446 SPATA31A5Q5VU36 1347 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms