RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ADGRB2O60241 1585 aa16.46■□□□□ 0.23
TMEM116-218ENST00000552839 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
TMEM116-218ENST00000552839 POGKQ9P215 609 aa16.45■□□□□ 0.22
TMEM116-218ENST00000552839 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
TMEM116-218ENST00000552839 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
TMEM116-218ENST00000552839 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
TMEM116-218ENST00000552839 R3HDM1Q15032 1099 aaKnown RBP16.44■□□□□ 0.22
TMEM116-218ENST00000552839 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
TMEM116-218ENST00000552839 DISP2A7MBM2 1401 aa16.43■□□□□ 0.22
TMEM116-218ENST00000552839 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
TMEM116-218ENST00000552839 GPRASP1Q5JY77 1395 aa16.42■□□□□ 0.22
TMEM116-218ENST00000552839 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
TMEM116-218ENST00000552839 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
TMEM116-218ENST00000552839 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
TMEM116-218ENST00000552839 MINK1Q8N4C8 1332 aaPredicted RBP16.4■□□□□ 0.22
TMEM116-218ENST00000552839 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
TMEM116-218ENST00000552839 CAMKK2Q96RR4 588 aa16.38■□□□□ 0.21
TMEM116-218ENST00000552839 PRDM11Q9NQV5 511 aa16.38■□□□□ 0.21
TMEM116-218ENST00000552839 WASLO00401 505 aaPredicted RBP16.37■□□□□ 0.21
TMEM116-218ENST00000552839 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
TMEM116-218ENST00000552839 TRIM37O94972 964 aa16.37■□□□□ 0.21
TMEM116-218ENST00000552839 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
TMEM116-218ENST00000552839 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
TMEM116-218ENST00000552839 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
TMEM116-218ENST00000552839 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
TMEM116-218ENST00000552839 PHRF1Q9P1Y6 1649 aaKnown RBP16.35■□□□□ 0.21
TMEM116-218ENST00000552839 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
TMEM116-218ENST00000552839 FAM196AQ6ZSG2 479 aa16.35■□□□□ 0.21
TMEM116-218ENST00000552839 KIAA0232Q92628 1395 aa16.35■□□□□ 0.21
TMEM116-218ENST00000552839 ITSN1Q15811 1721 aa16.34■□□□□ 0.21
TMEM116-218ENST00000552839 STRN4Q9NRL3 753 aa16.34■□□□□ 0.21
TMEM116-218ENST00000552839 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
TMEM116-218ENST00000552839 RREB1Q92766 1687 aa16.34■□□□□ 0.21
TMEM116-218ENST00000552839 APBA3O96018 575 aa16.33■□□□□ 0.2
TMEM116-218ENST00000552839 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
TMEM116-218ENST00000552839 NUP188Q5SRE5 1749 aa16.32■□□□□ 0.2
TMEM116-218ENST00000552839 TONSLQ96HA7 1378 aa16.32■□□□□ 0.2
TMEM116-218ENST00000552839 ARHGEF28Q8N1W1 1705 aaKnown RBP16.31■□□□□ 0.2
TMEM116-218ENST00000552839 USP35Q9P2H5 1018 aa16.31■□□□□ 0.2
TMEM116-218ENST00000552839 KDM2AQ9Y2K7 1162 aa16.31■□□□□ 0.2
TMEM116-218ENST00000552839 ATP7BP35670 1465 aa16.3■□□□□ 0.2
TMEM116-218ENST00000552839 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
TMEM116-218ENST00000552839 SIN3AQ96ST3 1273 aa16.3■□□□□ 0.2
TMEM116-218ENST00000552839 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
TMEM116-218ENST00000552839 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
TMEM116-218ENST00000552839 NUDT16Q96DE0 195 aaKnown RBP16.29■□□□□ 0.2
TMEM116-218ENST00000552839 PDE3BQ13370 1112 aa16.28■□□□□ 0.2
TMEM116-218ENST00000552839 DCAF11Q8TEB1 546 aa16.28■□□□□ 0.2
TMEM116-218ENST00000552839 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
TMEM116-218ENST00000552839 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.2
TMEM116-218ENST00000552839 EVA1CP58658 441 aa16.27■□□□□ 0.2
TMEM116-218ENST00000552839 YY1P25490 414 aa16.26■□□□□ 0.19
TMEM116-218ENST00000552839 TOPAZ1Q8N9V7 1692 aa16.26■□□□□ 0.19
TMEM116-218ENST00000552839 LMO7Q8WWI1 1683 aa16.26■□□□□ 0.19
TMEM116-218ENST00000552839 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
TMEM116-218ENST00000552839 LARP1Q6PKG0 1096 aaKnown RBP16.25■□□□□ 0.19
TMEM116-218ENST00000552839 POLR3AO14802 1390 aaPredicted RBP16.25■□□□□ 0.19
TMEM116-218ENST00000552839 ACEP12821 1306 aa16.24■□□□□ 0.19
TMEM116-218ENST00000552839 NBPF8Q3BBV2 869 aa16.24■□□□□ 0.19
TMEM116-218ENST00000552839 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
TMEM116-218ENST00000552839 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
TMEM116-218ENST00000552839 CDK19Q9BWU1 502 aa16.24■□□□□ 0.19
TMEM116-218ENST00000552839 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
TMEM116-218ENST00000552839 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
TMEM116-218ENST00000552839 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
TMEM116-218ENST00000552839 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
TMEM116-218ENST00000552839 SPON1Q9HCB6 807 aa16.21■□□□□ 0.19
TMEM116-218ENST00000552839 THRAP3Q9Y2W1 955 aaKnown RBP16.21■□□□□ 0.19
TMEM116-218ENST00000552839 CCDC61Q9Y6R9 512 aa16.21■□□□□ 0.19
TMEM116-218ENST00000552839 CPDO75976 1380 aa16.21■□□□□ 0.19
TMEM116-218ENST00000552839 USP19O94966 1318 aa16.2■□□□□ 0.18
TMEM116-218ENST00000552839 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
TMEM116-218ENST00000552839 KCNQ2O43526 872 aa16.2■□□□□ 0.18
TMEM116-218ENST00000552839 PEAK1Q9H792 1746 aa16.19■□□□□ 0.18
TMEM116-218ENST00000552839 PPP1R1BQ9UD71 204 aaPredicted RBP16.19■□□□□ 0.18
TMEM116-218ENST00000552839 COL5A2P05997 1499 aaPredicted RBP16.18■□□□□ 0.18
TMEM116-218ENST00000552839 GCP02774 474 aa16.18■□□□□ 0.18
TMEM116-218ENST00000552839 RGPD3A6NKT7 1758 aaPredicted RBP16.18■□□□□ 0.18
TMEM116-218ENST00000552839 RGPD4Q7Z3J3 1758 aa16.18■□□□□ 0.18
TMEM116-218ENST00000552839 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
TMEM116-218ENST00000552839 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
TMEM116-218ENST00000552839 NINLQ9Y2I6 1382 aa16.16■□□□□ 0.18
TMEM116-218ENST00000552839 C11orf95C9JLR9 678 aaPredicted RBP16.15■□□□□ 0.18
TMEM116-218ENST00000552839 CRB1P82279 1406 aa16.15■□□□□ 0.18
TMEM116-218ENST00000552839 TIMELESSQ9UNS1 1208 aa16.15■□□□□ 0.18
TMEM116-218ENST00000552839 CASZ1Q86V15 1759 aa16.15■□□□□ 0.18
TMEM116-218ENST00000552839 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
TMEM116-218ENST00000552839 OVOS2A0A0G2JMS6 1433 aa16.14■□□□□ 0.17
TMEM116-218ENST00000552839 OVOS2A0A0J9YW53 1432 aa16.14■□□□□ 0.17
TMEM116-218ENST00000552839 OVOS2Q6IE36 1432 aa16.14■□□□□ 0.17
TMEM116-218ENST00000552839 PLSCR1O15162 318 aa16.14■□□□□ 0.17
TMEM116-218ENST00000552839 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
TMEM116-218ENST00000552839 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
TMEM116-218ENST00000552839 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
TMEM116-218ENST00000552839 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
TMEM116-218ENST00000552839 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
TMEM116-218ENST00000552839 PTF1AQ7RTS3 328 aa16.12■□□□□ 0.17
TMEM116-218ENST00000552839 COL18A1P39060 1754 aa16.12■□□□□ 0.17
TMEM116-218ENST00000552839 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
TMEM116-218ENST00000552839 PDGFDQ9GZP0 370 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms