RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 COL22A1Q8NFW1 1626 aaPredicted RBP25.95■■□□□ 1.74
DDX54-209ENST00000551912 KTN1Q86UP2 1357 aaKnown RBP25.95■■□□□ 1.74
DDX54-209ENST00000551912 ALS2Q96Q42 1657 aa25.93■■□□□ 1.74
DDX54-209ENST00000551912 A0A1W2PP64 1363 aa25.93■■□□□ 1.74
DDX54-209ENST00000551912 NUTM2BA6NNL0 878 aaPredicted RBP25.92■■□□□ 1.74
DDX54-209ENST00000551912 NUTM2EB1AL46 878 aaPredicted RBP25.92■■□□□ 1.74
DDX54-209ENST00000551912 C11orf95C9JLR9 678 aaPredicted RBP25.92■■□□□ 1.74
DDX54-209ENST00000551912 NUTM2AQ8IVF1 878 aaPredicted RBP25.92■■□□□ 1.74
DDX54-209ENST00000551912 SSH2Q76I76 1423 aa25.91■■□□□ 1.74
DDX54-209ENST00000551912 ABTB2Q8N961 1025 aa25.9■■□□□ 1.74
DDX54-209ENST00000551912 MON2Q7Z3U7 1717 aa25.9■■□□□ 1.74
DDX54-209ENST00000551912 ANKRD36BQ8N2N9 1353 aa25.9■■□□□ 1.74
DDX54-209ENST00000551912 MED1Q15648 1581 aaPredicted RBP25.9■■□□□ 1.74
DDX54-209ENST00000551912 TTC21BQ7Z4L5 1316 aa25.88■■□□□ 1.73
DDX54-209ENST00000551912 LRP6O75581 1613 aa25.88■■□□□ 1.73
DDX54-209ENST00000551912 TTC21AQ8NDW8 1320 aa25.88■■□□□ 1.73
DDX54-209ENST00000551912 MYOM1P52179 1685 aa25.87■■□□□ 1.73
DDX54-209ENST00000551912 EDC4Q6P2E9 1401 aaKnown RBP25.87■■□□□ 1.73
DDX54-209ENST00000551912 KIF7Q2M1P5 1343 aa25.87■■□□□ 1.73
DDX54-209ENST00000551912 NRKQ7Z2Y5 1582 aa25.86■■□□□ 1.73
DDX54-209ENST00000551912 PLEKHG5O94827 1062 aa25.86■■□□□ 1.73
DDX54-209ENST00000551912 MEX3CQ5U5Q3 659 aaKnown RBP25.86■■□□□ 1.73
DDX54-209ENST00000551912 HAP1P54257 671 aaPredicted RBP25.85■■□□□ 1.73
DDX54-209ENST00000551912 NUTM2GQ5VZR2 741 aa25.85■■□□□ 1.73
DDX54-209ENST00000551912 CABLES1Q8TDN4 633 aa25.85■■□□□ 1.73
DDX54-209ENST00000551912 ADAMTS2O95450 1211 aa25.83■■□□□ 1.73
DDX54-209ENST00000551912 NLRP13Q86W25 1043 aa25.83■■□□□ 1.73
DDX54-209ENST00000551912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.83■■□□□ 1.73
DDX54-209ENST00000551912 NLRP6P59044 892 aa25.82■■□□□ 1.72
DDX54-209ENST00000551912 PIK3C2AO00443 1686 aa25.8■■□□□ 1.72
DDX54-209ENST00000551912 ABCA3Q99758 1704 aa25.8■■□□□ 1.72
DDX54-209ENST00000551912 CCDC7Q96M83 1385 aa25.79■■□□□ 1.72
DDX54-209ENST00000551912 PHF23Q9BUL5 403 aaPredicted RBP25.78■■□□□ 1.72
DDX54-209ENST00000551912 USP19O94966 1318 aa25.78■■□□□ 1.72
DDX54-209ENST00000551912 WASHC2AQ641Q2 1341 aa25.78■■□□□ 1.72
DDX54-209ENST00000551912 CRYBG1Q9Y4K1 1723 aa25.77■■□□□ 1.72
DDX54-209ENST00000551912 NME9Q86XW9 330 aa25.77■■□□□ 1.72
DDX54-209ENST00000551912 C8orf37Q96NL8 207 aa25.77■■□□□ 1.72
DDX54-209ENST00000551912 CARD14Q9BXL6 1004 aa25.76■■□□□ 1.71
DDX54-209ENST00000551912 USP31Q70CQ4 1352 aa25.75■■□□□ 1.71
DDX54-209ENST00000551912 PANK3Q9H999 370 aa25.75■■□□□ 1.71
DDX54-209ENST00000551912 PHRF1Q9P1Y6 1649 aaKnown RBP25.74■■□□□ 1.71
DDX54-209ENST00000551912 NSD3Q9BZ95 1437 aa25.74■■□□□ 1.71
DDX54-209ENST00000551912 MARF1Q9Y4F3 1742 aaKnown RBP25.74■■□□□ 1.71
DDX54-209ENST00000551912 NGLY1Q96IV0 654 aa25.73■■□□□ 1.71
DDX54-209ENST00000551912 ZRANB1Q9UGI0 708 aa25.73■■□□□ 1.71
DDX54-209ENST00000551912 GCP02774 474 aa25.72■■□□□ 1.71
DDX54-209ENST00000551912 SLIT3O75094 1523 aa25.71■■□□□ 1.71
DDX54-209ENST00000551912 AFF2P51816 1311 aa25.69■■□□□ 1.7
DDX54-209ENST00000551912 USP54Q70EL1 1684 aa25.69■■□□□ 1.7
DDX54-209ENST00000551912 FYB1O15117 783 aa25.69■■□□□ 1.7
DDX54-209ENST00000551912 KCNH5Q8NCM2 988 aa25.69■■□□□ 1.7
DDX54-209ENST00000551912 ZC3H6P61129 1189 aaKnown RBP25.68■■□□□ 1.7
DDX54-209ENST00000551912 COG3Q96JB2 828 aa25.68■■□□□ 1.7
DDX54-209ENST00000551912 PRDM11Q9NQV5 511 aa25.68■■□□□ 1.7
DDX54-209ENST00000551912 OVOS2A0A0J9YW53 1432 aa25.68■■□□□ 1.7
DDX54-209ENST00000551912 OVOS2Q6IE36 1432 aa25.68■■□□□ 1.7
DDX54-209ENST00000551912 KIAA0232Q92628 1395 aa25.68■■□□□ 1.7
DDX54-209ENST00000551912 CGNL1Q0VF96 1302 aa25.67■■□□□ 1.7
DDX54-209ENST00000551912 FAM83GA6ND36 823 aa25.67■■□□□ 1.7
DDX54-209ENST00000551912 FNBP4Q8N3X1 1017 aaPredicted RBP25.67■■□□□ 1.7
DDX54-209ENST00000551912 ZNF772Q68DY9 489 aaPredicted RBP25.66■■□□□ 1.7
DDX54-209ENST00000551912 GGNBP2Q9H3C7 697 aa25.66■■□□□ 1.7
DDX54-209ENST00000551912 RGS17Q9UGC6 210 aaPredicted RBP25.66■■□□□ 1.7
DDX54-209ENST00000551912 CPDO75976 1380 aa25.66■■□□□ 1.7
DDX54-209ENST00000551912 SOX12O15370 315 aa25.65■■□□□ 1.7
DDX54-209ENST00000551912 KIF20BQ96Q89 1820 aa25.65■■□□□ 1.7
DDX54-209ENST00000551912 USP21Q9UK80 565 aa25.63■■□□□ 1.69
DDX54-209ENST00000551912 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
DDX54-209ENST00000551912 COL14A1Q05707 1796 aaKnown RBP25.63■■□□□ 1.69
DDX54-209ENST00000551912 SLIT2O94813 1529 aa25.63■■□□□ 1.69
DDX54-209ENST00000551912 CHRNA2Q15822 529 aa25.62■■□□□ 1.69
DDX54-209ENST00000551912 NFAT5O94916 1531 aa25.61■■□□□ 1.69
DDX54-209ENST00000551912 PLCH1Q4KWH8 1693 aa25.6■■□□□ 1.69
DDX54-209ENST00000551912 BCL9LQ86UU0 1499 aa25.6■■□□□ 1.69
DDX54-209ENST00000551912 ZBTB7CA1YPR0 619 aa25.59■■□□□ 1.69
DDX54-209ENST00000551912 ARHGEF25Q86VW2 580 aa25.59■■□□□ 1.69
DDX54-209ENST00000551912 BTG4Q9NY30 223 aa25.59■■□□□ 1.69
DDX54-209ENST00000551912 NWD2Q9ULI1 1742 aa25.58■■□□□ 1.69
DDX54-209ENST00000551912 UNC5CLQ8IV45 518 aa25.58■■□□□ 1.69
DDX54-209ENST00000551912 NSD2O96028 1365 aa25.57■■□□□ 1.68
DDX54-209ENST00000551912 PER1O15534 1290 aaPredicted RBP25.57■■□□□ 1.68
DDX54-209ENST00000551912 AATKQ6ZMQ8 1374 aa25.56■■□□□ 1.68
DDX54-209ENST00000551912 POTEAQ6S8J7 498 aa25.56■■□□□ 1.68
DDX54-209ENST00000551912 QTRT2Q9H974 415 aaKnown RBP25.55■■□□□ 1.68
DDX54-209ENST00000551912 TRPC5Q9UL62 973 aaPredicted RBP25.55■■□□□ 1.68
DDX54-209ENST00000551912 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.54■■□□□ 1.68
DDX54-209ENST00000551912 AMER1Q5JTC6 1135 aaPredicted RBP25.54■■□□□ 1.68
DDX54-209ENST00000551912 LMO7Q8WWI1 1683 aa25.52■■□□□ 1.68
DDX54-209ENST00000551912 ATRNO75882 1429 aa25.52■■□□□ 1.68
DDX54-209ENST00000551912 CAMTA1Q9Y6Y1 1673 aa25.52■■□□□ 1.68
DDX54-209ENST00000551912 NRAPQ86VF7 1730 aa25.51■■□□□ 1.68
DDX54-209ENST00000551912 ANKRD26Q9UPS8 1709 aa25.51■■□□□ 1.68
DDX54-209ENST00000551912 FBLN1P23142 703 aa25.51■■□□□ 1.67
DDX54-209ENST00000551912 LTN1O94822 1766 aa25.51■■□□□ 1.67
DDX54-209ENST00000551912 ABCC6O95255 1503 aa25.5■■□□□ 1.67
DDX54-209ENST00000551912 COL18A1P39060 1754 aa25.5■■□□□ 1.67
DDX54-209ENST00000551912 EVA1CP58658 441 aa25.5■■□□□ 1.67
DDX54-209ENST00000551912 MAP3K19Q56UN5 1328 aa25.49■■□□□ 1.67
DDX54-209ENST00000551912 VPS72Q15906 364 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms