RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 BRWD3Q6RI45 1802 aa33.3■■■□□ 2.92
TROAP-216ENST00000551567 FAM83GA6ND36 823 aa33.3■■■□□ 2.92
TROAP-216ENST00000551567 COL14A1Q05707 1796 aaKnown RBP33.29■■■□□ 2.92
TROAP-216ENST00000551567 TRPM1Q7Z4N2 1603 aa33.29■■■□□ 2.92
TROAP-216ENST00000551567 CENPJQ9HC77 1338 aaPredicted RBP33.28■■■□□ 2.92
TROAP-216ENST00000551567 NEUROD1Q13562 356 aa33.28■■■□□ 2.92
TROAP-216ENST00000551567 VPS72Q15906 364 aa33.28■■■□□ 2.92
TROAP-216ENST00000551567 CCDC9Q9Y3X0 531 aaKnown RBP33.28■■■□□ 2.92
TROAP-216ENST00000551567 PHRF1Q9P1Y6 1649 aaKnown RBP33.25■■■□□ 2.91
TROAP-216ENST00000551567 ACEP12821 1306 aa33.25■■■□□ 2.91
TROAP-216ENST00000551567 POLR3AO14802 1390 aaPredicted RBP33.24■■■□□ 2.91
TROAP-216ENST00000551567 CCDC61Q9Y6R9 512 aa33.24■■■□□ 2.91
TROAP-216ENST00000551567 SRPK2P78362 688 aaKnown RBP33.22■■■□□ 2.91
TROAP-216ENST00000551567 BTG4Q9NY30 223 aa33.22■■■□□ 2.91
TROAP-216ENST00000551567 NBPF8Q3BBV2 869 aa33.19■■■□□ 2.9
TROAP-216ENST00000551567 NUTM2GQ5VZR2 741 aa33.19■■■□□ 2.9
TROAP-216ENST00000551567 SEPT12Q8IYM1 358 aa33.19■■■□□ 2.9
TROAP-216ENST00000551567 PPIP5K1Q6PFW1 1433 aa33.19■■■□□ 2.9
TROAP-216ENST00000551567 PLEKHG3A1L390 1219 aa33.18■■■□□ 2.9
TROAP-216ENST00000551567 CABP2Q9NPB3 220 aa33.17■■■□□ 2.9
TROAP-216ENST00000551567 PRDM11Q9NQV5 511 aa33.16■■■□□ 2.9
TROAP-216ENST00000551567 ROCK2O75116 1388 aaKnown RBP33.14■■■□□ 2.9
TROAP-216ENST00000551567 KIAA0232Q92628 1395 aa33.13■■■□□ 2.89
TROAP-216ENST00000551567 A0A0G2JS52 829 aa33.12■■■□□ 2.89
TROAP-216ENST00000551567 MYT1Q01538 1121 aa33.12■■■□□ 2.89
TROAP-216ENST00000551567 ONECUT3O60422 494 aaPredicted RBP33.11■■■□□ 2.89
TROAP-216ENST00000551567 NRKQ7Z2Y5 1582 aa33.11■■■□□ 2.89
TROAP-216ENST00000551567 CHRNA2Q15822 529 aa33.09■■■□□ 2.89
TROAP-216ENST00000551567 FAM98CQ17RN3 349 aaKnown RBP33.09■■■□□ 2.89
TROAP-216ENST00000551567 CCDC125Q86Z20 511 aa33.09■■■□□ 2.89
TROAP-216ENST00000551567 ZC3H6P61129 1189 aaKnown RBP33.08■■■□□ 2.89
TROAP-216ENST00000551567 ABTB2Q8N961 1025 aa33.08■■■□□ 2.89
TROAP-216ENST00000551567 BLMP54132 1417 aaPredicted RBP33.06■■■□□ 2.88
TROAP-216ENST00000551567 KRT27Q7Z3Y8 459 aa33.06■■■□□ 2.88
TROAP-216ENST00000551567 SPATA31A5Q5VU36 1347 aa33.04■■■□□ 2.88
TROAP-216ENST00000551567 EVC2Q86UK5 1308 aa33.04■■■□□ 2.88
TROAP-216ENST00000551567 SPATA31A7Q8IWB4 1347 aa33.04■■■□□ 2.88
TROAP-216ENST00000551567 CABP1Q9NZU7 370 aa33.04■■■□□ 2.88
TROAP-216ENST00000551567 USP19O94966 1318 aa33.02■■■□□ 2.88
TROAP-216ENST00000551567 THSD7AQ9UPZ6 1657 aa33.01■■■□□ 2.88
TROAP-216ENST00000551567 USP6P35125 1406 aa33.01■■■□□ 2.87
TROAP-216ENST00000551567 STRN4Q9NRL3 753 aa33■■■□□ 2.87
TROAP-216ENST00000551567 LMO7Q8WWI1 1683 aa32.97■■■□□ 2.87
TROAP-216ENST00000551567 BRD4O60885 1362 aaPredicted RBP32.97■■■□□ 2.87
TROAP-216ENST00000551567 NLRP13Q86W25 1043 aa32.97■■■□□ 2.87
TROAP-216ENST00000551567 AKAP12Q02952 1782 aa32.96■■■□□ 2.87
TROAP-216ENST00000551567 TONSLQ96HA7 1378 aa32.96■■■□□ 2.87
TROAP-216ENST00000551567 PIK3C2AO00443 1686 aa32.95■■■□□ 2.87
TROAP-216ENST00000551567 CAMTA1Q9Y6Y1 1673 aa32.95■■■□□ 2.87
TROAP-216ENST00000551567 SF3B2Q13435 895 aaKnown RBP32.95■■■□□ 2.87
TROAP-216ENST00000551567 SPATA31A1Q5TZJ5 1347 aa32.95■■■□□ 2.86
TROAP-216ENST00000551567 CPDO75976 1380 aa32.95■■■□□ 2.86
TROAP-216ENST00000551567 DEFB132Q7Z7B7 95 aa32.94■■■□□ 2.86
TROAP-216ENST00000551567 SSH2Q76I76 1423 aa32.94■■■□□ 2.86
TROAP-216ENST00000551567 ZRANB1Q9UGI0 708 aa32.93■■■□□ 2.86
TROAP-216ENST00000551567 GCP02774 474 aa32.92■■■□□ 2.86
TROAP-216ENST00000551567 EVA1CP58658 441 aa32.9■■■□□ 2.86
TROAP-216ENST00000551567 NLRP6P59044 892 aa32.9■■■□□ 2.86
TROAP-216ENST00000551567 FAM182BQ5T319 152 aa32.9■■■□□ 2.86
TROAP-216ENST00000551567 CARD11Q9BXL7 1154 aa32.9■■■□□ 2.86
TROAP-216ENST00000551567 USP35Q9P2H5 1018 aa32.9■■■□□ 2.86
TROAP-216ENST00000551567 SLIT3O75094 1523 aa32.9■■■□□ 2.86
TROAP-216ENST00000551567 TRIM26Q12899 539 aaPredicted RBP32.89■■■□□ 2.86
TROAP-216ENST00000551567 RGPD1P0DJD0 1748 aa32.88■■■□□ 2.85
TROAP-216ENST00000551567 ZBTB7CA1YPR0 619 aa32.87■■■□□ 2.85
TROAP-216ENST00000551567 LARP1Q6PKG0 1096 aaKnown RBP32.85■■■□□ 2.85
TROAP-216ENST00000551567 SBNO2Q9Y2G9 1366 aa32.84■■■□□ 2.85
TROAP-216ENST00000551567 COL5A2P05997 1499 aaPredicted RBP32.83■■■□□ 2.85
TROAP-216ENST00000551567 MON2Q7Z3U7 1717 aa32.82■■■□□ 2.85
TROAP-216ENST00000551567 TTC21BQ7Z4L5 1316 aa32.81■■■□□ 2.84
TROAP-216ENST00000551567 ZNF692Q9BU19 519 aaPredicted RBP32.81■■■□□ 2.84
TROAP-216ENST00000551567 TNS1Q9HBL0 1735 aaKnown RBP32.81■■■□□ 2.84
TROAP-216ENST00000551567 SRCAPQ6ZRS2 3230 aa32.81■■■□□ 2.84
TROAP-216ENST00000551567 CPSF1Q10570 1443 aaKnown RBP32.8■■■□□ 2.84
TROAP-216ENST00000551567 BAG6P46379 1132 aa32.79■■■□□ 2.84
TROAP-216ENST00000551567 KTN1Q86UP2 1357 aaKnown RBP32.79■■■□□ 2.84
TROAP-216ENST00000551567 BARGINQ6ZT62 677 aa32.78■■■□□ 2.84
TROAP-216ENST00000551567 COL18A1P39060 1754 aa32.78■■■□□ 2.84
TROAP-216ENST00000551567 TCP11L2Q8N4U5 519 aa32.77■■■□□ 2.84
TROAP-216ENST00000551567 AATKQ6ZMQ8 1374 aa32.76■■■□□ 2.83
TROAP-216ENST00000551567 TTC21AQ8NDW8 1320 aa32.76■■■□□ 2.83
TROAP-216ENST00000551567 CRB1P82279 1406 aa32.74■■■□□ 2.83
TROAP-216ENST00000551567 PARP4Q9UKK3 1724 aaKnown RBP32.74■■■□□ 2.83
TROAP-216ENST00000551567 SOX12O15370 315 aa32.73■■■□□ 2.83
TROAP-216ENST00000551567 RGPD5Q99666 1765 aa32.73■■■□□ 2.83
TROAP-216ENST00000551567 CD163L1Q9NR16 1453 aa32.71■■■□□ 2.83
TROAP-216ENST00000551567 EN1Q05925 392 aaPredicted RBP32.7■■■□□ 2.83
TROAP-216ENST00000551567 PDE3BQ13370 1112 aa32.7■■■□□ 2.83
TROAP-216ENST00000551567 FAM196AQ6ZSG2 479 aa32.7■■■□□ 2.83
TROAP-216ENST00000551567 TMC1Q8TDI8 760 aa32.7■■■□□ 2.83
TROAP-216ENST00000551567 THRAP3Q9Y2W1 955 aaKnown RBP32.7■■■□□ 2.83
TROAP-216ENST00000551567 NFAT5O94916 1531 aa32.7■■■□□ 2.83
TROAP-216ENST00000551567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.68■■■□□ 2.82
TROAP-216ENST00000551567 KCNH5Q8NCM2 988 aa32.68■■■□□ 2.82
TROAP-216ENST00000551567 WNK3Q9BYP7 1800 aa32.67■■■□□ 2.82
TROAP-216ENST00000551567 TRIM37O94972 964 aa32.67■■■□□ 2.82
TROAP-216ENST00000551567 AXIN2Q9Y2T1 843 aa32.67■■■□□ 2.82
TROAP-216ENST00000551567 DISP2A7MBM2 1401 aa32.67■■■□□ 2.82
TROAP-216ENST00000551567 USP54Q70EL1 1684 aa32.66■■■□□ 2.82
TROAP-216ENST00000551567 ARHGEF25Q86VW2 580 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms