RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 PLEKHG5O94827 1062 aa23.91■■□□□ 1.42
LETMD1-230ENST00000551477 CABLES1Q8TDN4 633 aa23.91■■□□□ 1.42
LETMD1-230ENST00000551477 BRD4O60885 1362 aaPredicted RBP23.91■■□□□ 1.42
LETMD1-230ENST00000551477 ABCA3Q99758 1704 aa23.9■■□□□ 1.42
LETMD1-230ENST00000551477 FNBP4Q8N3X1 1017 aaPredicted RBP23.88■■□□□ 1.41
LETMD1-230ENST00000551477 PUS7Q96PZ0 661 aaKnown RBP23.88■■□□□ 1.41
LETMD1-230ENST00000551477 ZNF692Q9BU19 519 aaPredicted RBP23.88■■□□□ 1.41
LETMD1-230ENST00000551477 USP21Q9UK80 565 aa23.88■■□□□ 1.41
LETMD1-230ENST00000551477 TESK2Q96S53 571 aa23.87■■□□□ 1.41
LETMD1-230ENST00000551477 SOCS7O14512 581 aa23.86■■□□□ 1.41
LETMD1-230ENST00000551477 ABTB2Q8N961 1025 aa23.86■■□□□ 1.41
LETMD1-230ENST00000551477 QTRT2Q9H974 415 aaKnown RBP23.86■■□□□ 1.41
LETMD1-230ENST00000551477 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
LETMD1-230ENST00000551477 USP6P35125 1406 aa23.85■■□□□ 1.41
LETMD1-230ENST00000551477 RXRBP28702 533 aa23.85■■□□□ 1.41
LETMD1-230ENST00000551477 TMC1Q8TDI8 760 aa23.83■■□□□ 1.41
LETMD1-230ENST00000551477 TRPC5Q9UL62 973 aaPredicted RBP23.83■■□□□ 1.41
LETMD1-230ENST00000551477 CRYBG1Q9Y4K1 1723 aa23.83■■□□□ 1.41
LETMD1-230ENST00000551477 TMF1P82094 1093 aa23.82■■□□□ 1.4
LETMD1-230ENST00000551477 NUTM2GQ5VZR2 741 aa23.81■■□□□ 1.4
LETMD1-230ENST00000551477 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
LETMD1-230ENST00000551477 RBM6P78332 1123 aaKnown RBP23.8■■□□□ 1.4
LETMD1-230ENST00000551477 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.8■■□□□ 1.4
LETMD1-230ENST00000551477 KTN1Q86UP2 1357 aaKnown RBP23.79■■□□□ 1.4
LETMD1-230ENST00000551477 NWD2Q9ULI1 1742 aa23.79■■□□□ 1.4
LETMD1-230ENST00000551477 CPSF1Q10570 1443 aaKnown RBP23.79■■□□□ 1.4
LETMD1-230ENST00000551477 CDCA8Q53HL2 280 aa23.79■■□□□ 1.4
LETMD1-230ENST00000551477 HDGFL2Q7Z4V5 671 aaPredicted RBP23.79■■□□□ 1.4
LETMD1-230ENST00000551477 PHRF1Q9P1Y6 1649 aaKnown RBP23.79■■□□□ 1.4
LETMD1-230ENST00000551477 BCL9LQ86UU0 1499 aa23.79■■□□□ 1.4
LETMD1-230ENST00000551477 PLCH1Q4KWH8 1693 aa23.79■■□□□ 1.4
LETMD1-230ENST00000551477 SLIT2O94813 1529 aa23.79■■□□□ 1.4
LETMD1-230ENST00000551477 NINLQ9Y2I6 1382 aa23.78■■□□□ 1.4
LETMD1-230ENST00000551477 UNC5CLQ8IV45 518 aa23.78■■□□□ 1.4
LETMD1-230ENST00000551477 TERF2IPQ9NYB0 399 aa23.78■■□□□ 1.4
LETMD1-230ENST00000551477 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
LETMD1-230ENST00000551477 SSH2Q76I76 1423 aa23.77■■□□□ 1.4
LETMD1-230ENST00000551477 MON2Q7Z3U7 1717 aa23.77■■□□□ 1.4
LETMD1-230ENST00000551477 FAM83GA6ND36 823 aa23.77■■□□□ 1.4
LETMD1-230ENST00000551477 TTC21AQ8NDW8 1320 aa23.77■■□□□ 1.4
LETMD1-230ENST00000551477 ATRNO75882 1429 aa23.76■■□□□ 1.39
LETMD1-230ENST00000551477 CDK12Q9NYV4 1490 aaPredicted RBP23.76■■□□□ 1.39
LETMD1-230ENST00000551477 SLC12A5Q9H2X9 1139 aa23.76■■□□□ 1.39
LETMD1-230ENST00000551477 NLRP6P59044 892 aa23.75■■□□□ 1.39
LETMD1-230ENST00000551477 PRDM11Q9NQV5 511 aa23.75■■□□□ 1.39
LETMD1-230ENST00000551477 TTC21BQ7Z4L5 1316 aa23.75■■□□□ 1.39
LETMD1-230ENST00000551477 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
LETMD1-230ENST00000551477 USP19O94966 1318 aa23.74■■□□□ 1.39
LETMD1-230ENST00000551477 NRKQ7Z2Y5 1582 aa23.74■■□□□ 1.39
LETMD1-230ENST00000551477 PIK3C2AO00443 1686 aa23.73■■□□□ 1.39
LETMD1-230ENST00000551477 CD163L1Q9NR16 1453 aa23.72■■□□□ 1.39
LETMD1-230ENST00000551477 KIAA0232Q92628 1395 aa23.71■■□□□ 1.39
LETMD1-230ENST00000551477 ZC3H6P61129 1189 aaKnown RBP23.71■■□□□ 1.39
LETMD1-230ENST00000551477 GJD4Q96KN9 370 aaPredicted RBP23.71■■□□□ 1.39
LETMD1-230ENST00000551477 BTG4Q9NY30 223 aa23.71■■□□□ 1.39
LETMD1-230ENST00000551477 GCP02774 474 aa23.7■■□□□ 1.38
LETMD1-230ENST00000551477 EDC4Q6P2E9 1401 aaKnown RBP23.68■■□□□ 1.38
LETMD1-230ENST00000551477 A0A1W2PP64 1363 aa23.68■■□□□ 1.38
LETMD1-230ENST00000551477 VPS72Q15906 364 aa23.68■■□□□ 1.38
LETMD1-230ENST00000551477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.68■■□□□ 1.38
LETMD1-230ENST00000551477 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
LETMD1-230ENST00000551477 NRAPQ86VF7 1730 aa23.67■■□□□ 1.38
LETMD1-230ENST00000551477 CPDO75976 1380 aa23.67■■□□□ 1.38
LETMD1-230ENST00000551477 SLIT3O75094 1523 aa23.67■■□□□ 1.38
LETMD1-230ENST00000551477 HSPA5P11021 654 aaKnown RBP23.66■■□□□ 1.38
LETMD1-230ENST00000551477 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
LETMD1-230ENST00000551477 CHRNA2Q15822 529 aa23.65■■□□□ 1.38
LETMD1-230ENST00000551477 RGS12O14924 1447 aa23.65■■□□□ 1.38
LETMD1-230ENST00000551477 ANKRD36BQ8N2N9 1353 aa23.65■■□□□ 1.38
LETMD1-230ENST00000551477 GLI3P10071 1580 aa23.62■■□□□ 1.37
LETMD1-230ENST00000551477 USP31Q70CQ4 1352 aa23.62■■□□□ 1.37
LETMD1-230ENST00000551477 USP54Q70EL1 1684 aa23.61■■□□□ 1.37
LETMD1-230ENST00000551477 EVA1CP58658 441 aa23.61■■□□□ 1.37
LETMD1-230ENST00000551477 NME9Q86XW9 330 aa23.61■■□□□ 1.37
LETMD1-230ENST00000551477 ZBTB7CA1YPR0 619 aa23.6■■□□□ 1.37
LETMD1-230ENST00000551477 STRN4Q9NRL3 753 aa23.59■■□□□ 1.37
LETMD1-230ENST00000551477 LMO7Q8WWI1 1683 aa23.58■■□□□ 1.37
LETMD1-230ENST00000551477 MYOM1P52179 1685 aa23.57■■□□□ 1.36
LETMD1-230ENST00000551477 AATKQ6ZMQ8 1374 aa23.57■■□□□ 1.36
LETMD1-230ENST00000551477 SOX12O15370 315 aa23.57■■□□□ 1.36
LETMD1-230ENST00000551477 POLR3GLQ9BT43 218 aa23.57■■□□□ 1.36
LETMD1-230ENST00000551477 ZRANB1Q9UGI0 708 aa23.57■■□□□ 1.36
LETMD1-230ENST00000551477 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
LETMD1-230ENST00000551477 SPATA31A5Q5VU36 1347 aa23.56■■□□□ 1.36
LETMD1-230ENST00000551477 SPATA31A7Q8IWB4 1347 aa23.56■■□□□ 1.36
LETMD1-230ENST00000551477 ARHGEF25Q86VW2 580 aa23.55■■□□□ 1.36
LETMD1-230ENST00000551477 NFAT5O94916 1531 aa23.54■■□□□ 1.36
LETMD1-230ENST00000551477 ONECUT3O60422 494 aaPredicted RBP23.54■■□□□ 1.36
LETMD1-230ENST00000551477 COG3Q96JB2 828 aa23.54■■□□□ 1.36
LETMD1-230ENST00000551477 A0A0G2JS52 829 aa23.52■■□□□ 1.36
LETMD1-230ENST00000551477 MYT1Q01538 1121 aa23.52■■□□□ 1.36
LETMD1-230ENST00000551477 SEPT12Q8IYM1 358 aa23.52■■□□□ 1.36
LETMD1-230ENST00000551477 SPATA31A1Q5TZJ5 1347 aa23.52■■□□□ 1.36
LETMD1-230ENST00000551477 COL18A1P39060 1754 aa23.52■■□□□ 1.36
LETMD1-230ENST00000551477 OVOS2A0A0J9YW53 1432 aa23.51■■□□□ 1.35
LETMD1-230ENST00000551477 OVOS2Q6IE36 1432 aa23.51■■□□□ 1.35
LETMD1-230ENST00000551477 COL5A2P05997 1499 aaPredicted RBP23.51■■□□□ 1.35
LETMD1-230ENST00000551477 FAM98CQ17RN3 349 aaKnown RBP23.51■■□□□ 1.35
LETMD1-230ENST00000551477 LTN1O94822 1766 aa23.5■■□□□ 1.35
LETMD1-230ENST00000551477 BRWD3Q6RI45 1802 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms