RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
LETMD1-228ENST00000550929 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
LETMD1-228ENST00000550929 TNS3Q68CZ2 1445 aa13.18□□□□□ -0.3
LETMD1-228ENST00000550929 WASLO00401 505 aaPredicted RBP13.18□□□□□ -0.3
LETMD1-228ENST00000550929 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
LETMD1-228ENST00000550929 CCDC9Q9Y3X0 531 aaKnown RBP13.17□□□□□ -0.3
LETMD1-228ENST00000550929 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
LETMD1-228ENST00000550929 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
LETMD1-228ENST00000550929 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
LETMD1-228ENST00000550929 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
LETMD1-228ENST00000550929 ANKARQ7Z5J8 1434 aa13.15□□□□□ -0.3
LETMD1-228ENST00000550929 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
LETMD1-228ENST00000550929 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
LETMD1-228ENST00000550929 STAC3Q96MF2 364 aa13.15□□□□□ -0.3
LETMD1-228ENST00000550929 SLIT2O94813 1529 aa13.15□□□□□ -0.3
LETMD1-228ENST00000550929 USP32Q8NFA0 1604 aa13.15□□□□□ -0.3
LETMD1-228ENST00000550929 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
LETMD1-228ENST00000550929 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
LETMD1-228ENST00000550929 GPRASP1Q5JY77 1395 aa13.14□□□□□ -0.31
LETMD1-228ENST00000550929 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
LETMD1-228ENST00000550929 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
LETMD1-228ENST00000550929 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
LETMD1-228ENST00000550929 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
LETMD1-228ENST00000550929 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
LETMD1-228ENST00000550929 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
LETMD1-228ENST00000550929 CDK19Q9BWU1 502 aa13.12□□□□□ -0.31
LETMD1-228ENST00000550929 EIF3AQ14152 1382 aaKnown RBP13.11□□□□□ -0.31
LETMD1-228ENST00000550929 VPS72Q15906 364 aa13.11□□□□□ -0.31
LETMD1-228ENST00000550929 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
LETMD1-228ENST00000550929 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
LETMD1-228ENST00000550929 GLI3P10071 1580 aa13.11□□□□□ -0.31
LETMD1-228ENST00000550929 A0A0G2JS52 829 aa13.1□□□□□ -0.31
LETMD1-228ENST00000550929 MYT1Q01538 1121 aa13.1□□□□□ -0.31
LETMD1-228ENST00000550929 BTG4Q9NY30 223 aa13.1□□□□□ -0.31
LETMD1-228ENST00000550929 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
LETMD1-228ENST00000550929 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
LETMD1-228ENST00000550929 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
LETMD1-228ENST00000550929 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
LETMD1-228ENST00000550929 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
LETMD1-228ENST00000550929 ZC3H6P61129 1189 aaKnown RBP13.07□□□□□ -0.32
LETMD1-228ENST00000550929 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
LETMD1-228ENST00000550929 DEFB132Q7Z7B7 95 aa13.07□□□□□ -0.32
LETMD1-228ENST00000550929 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
LETMD1-228ENST00000550929 ATP7BP35670 1465 aa13.07□□□□□ -0.32
LETMD1-228ENST00000550929 ARHGEF28Q8N1W1 1705 aaKnown RBP13.06□□□□□ -0.32
LETMD1-228ENST00000550929 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
LETMD1-228ENST00000550929 ACEP12821 1306 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 ABCA3Q99758 1704 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
LETMD1-228ENST00000550929 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 KRT27Q7Z3Y8 459 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 CCDC125Q86Z20 511 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 PRDM11Q9NQV5 511 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
LETMD1-228ENST00000550929 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
LETMD1-228ENST00000550929 ONECUT3O60422 494 aaPredicted RBP13.05□□□□□ -0.32
LETMD1-228ENST00000550929 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
LETMD1-228ENST00000550929 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
LETMD1-228ENST00000550929 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
LETMD1-228ENST00000550929 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
LETMD1-228ENST00000550929 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-228ENST00000550929 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
LETMD1-228ENST00000550929 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
LETMD1-228ENST00000550929 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
LETMD1-228ENST00000550929 ABTB2Q8N961 1025 aa13.02□□□□□ -0.33
LETMD1-228ENST00000550929 BLMP54132 1417 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-228ENST00000550929 BRWD3Q6RI45 1802 aa13.01□□□□□ -0.33
LETMD1-228ENST00000550929 EP400Q96L91 3159 aa13.01□□□□□ -0.33
LETMD1-228ENST00000550929 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
LETMD1-228ENST00000550929 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
LETMD1-228ENST00000550929 NWD2Q9ULI1 1742 aa13.01□□□□□ -0.33
LETMD1-228ENST00000550929 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
LETMD1-228ENST00000550929 ZBTB7CA1YPR0 619 aa13□□□□□ -0.33
LETMD1-228ENST00000550929 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
LETMD1-228ENST00000550929 CABP1Q9NZU7 370 aa13□□□□□ -0.33
LETMD1-228ENST00000550929 USP35Q9P2H5 1018 aa13□□□□□ -0.33
LETMD1-228ENST00000550929 COL14A1Q05707 1796 aaKnown RBP13□□□□□ -0.33
LETMD1-228ENST00000550929 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
LETMD1-228ENST00000550929 PPIP5K1Q6PFW1 1433 aa12.99□□□□□ -0.33
LETMD1-228ENST00000550929 EVA1CP58658 441 aa12.99□□□□□ -0.33
LETMD1-228ENST00000550929 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
LETMD1-228ENST00000550929 ITSN1Q15811 1721 aa12.98□□□□□ -0.33
LETMD1-228ENST00000550929 SPATA31A1Q5TZJ5 1347 aa12.97□□□□□ -0.33
LETMD1-228ENST00000550929 CRYBG1Q9Y4K1 1723 aa12.97□□□□□ -0.33
LETMD1-228ENST00000550929 NLRP13Q86W25 1043 aa12.96□□□□□ -0.33
LETMD1-228ENST00000550929 GCP02774 474 aa12.95□□□□□ -0.34
LETMD1-228ENST00000550929 BAG6P46379 1132 aa12.95□□□□□ -0.34
LETMD1-228ENST00000550929 NLRP6P59044 892 aa12.95□□□□□ -0.34
LETMD1-228ENST00000550929 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
LETMD1-228ENST00000550929 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
LETMD1-228ENST00000550929 TOPAZ1Q8N9V7 1692 aa12.95□□□□□ -0.34
LETMD1-228ENST00000550929 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
LETMD1-228ENST00000550929 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
LETMD1-228ENST00000550929 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
LETMD1-228ENST00000550929 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
LETMD1-228ENST00000550929 PHRF1Q9P1Y6 1649 aaKnown RBP12.94□□□□□ -0.34
LETMD1-228ENST00000550929 USP19O94966 1318 aa12.94□□□□□ -0.34
LETMD1-228ENST00000550929 QRICH2Q9H0J4 1663 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms