RNA–Protein interactions for RNA: ENST00000550808.5

MTA1-218, Transcript of metastasis associated 1, human

TSL 5

Gene MTA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTA1-218	ENST00000550808	VPS72	Q15906	364 aa		33.4	■■■□□ 2.94
MTA1-218	ENST00000550808	NRAP	Q86VF7	1730 aa		33.37	■■■□□ 2.93
MTA1-218	ENST00000550808	COL14A1	Q05707	1796 aa	Known RBP	33.37	■■■□□ 2.93
MTA1-218	ENST00000550808	NEUROD1	Q13562	356 aa		33.36	■■■□□ 2.93
MTA1-218	ENST00000550808	QRICH2	Q9H0J4	1663 aa		33.36	■■■□□ 2.93
MTA1-218	ENST00000550808	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.34	■■■□□ 2.93
MTA1-218	ENST00000550808	CCDC61	Q9Y6R9	512 aa		33.34	■■■□□ 2.93
MTA1-218	ENST00000550808	ACE	P12821	1306 aa		33.33	■■■□□ 2.93
MTA1-218	ENST00000550808	BTG4	Q9NY30	223 aa		33.33	■■■□□ 2.93
MTA1-218	ENST00000550808	SEPT12	Q8IYM1	358 aa		33.32	■■■□□ 2.92
MTA1-218	ENST00000550808	SRPK2	P78362	688 aa	Known RBP	33.31	■■■□□ 2.92
MTA1-218	ENST00000550808	POLR3A	O14802	1390 aa	Predicted RBP	33.31	■■■□□ 2.92
MTA1-218	ENST00000550808	TRPM1	Q7Z4N2	1603 aa		33.31	■■■□□ 2.92
MTA1-218	ENST00000550808	NBPF8	Q3BBV2	869 aa		33.3	■■■□□ 2.92
MTA1-218	ENST00000550808	NUTM2G	Q5VZR2	741 aa		33.3	■■■□□ 2.92
MTA1-218	ENST00000550808	EP400	Q96L91	3159 aa		33.3	■■■□□ 2.92
MTA1-218	ENST00000550808	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.29	■■■□□ 2.92
MTA1-218	ENST00000550808	PLEKHG3	A1L390	1219 aa		33.28	■■■□□ 2.92
MTA1-218	ENST00000550808	CABP2	Q9NPB3	220 aa		33.27	■■■□□ 2.92
MTA1-218	ENST00000550808	PRDM11	Q9NQV5	511 aa		33.27	■■■□□ 2.92
MTA1-218	ENST00000550808		A0A0G2JS52	829 aa		33.25	■■■□□ 2.91
MTA1-218	ENST00000550808	MYT1	Q01538	1121 aa		33.25	■■■□□ 2.91
MTA1-218	ENST00000550808	PPIP5K1	Q6PFW1	1433 aa		33.25	■■■□□ 2.91
MTA1-218	ENST00000550808	ONECUT3	O60422	494 aa	Predicted RBP	33.24	■■■□□ 2.91
MTA1-218	ENST00000550808	CCDC125	Q86Z20	511 aa		33.24	■■■□□ 2.91
MTA1-218	ENST00000550808	KIAA0232	Q92628	1395 aa		33.22	■■■□□ 2.91
MTA1-218	ENST00000550808	FAM98C	Q17RN3	349 aa	Known RBP	33.22	■■■□□ 2.91
MTA1-218	ENST00000550808	ZC3H6	P61129	1189 aa	Known RBP	33.2	■■■□□ 2.91
MTA1-218	ENST00000550808	CHRNA2	Q15822	529 aa		33.2	■■■□□ 2.91
MTA1-218	ENST00000550808	KRT27	Q7Z3Y8	459 aa		33.19	■■■□□ 2.9
MTA1-218	ENST00000550808	ABTB2	Q8N961	1025 aa		33.19	■■■□□ 2.9
MTA1-218	ENST00000550808	ROCK2	O75116	1388 aa	Known RBP	33.19	■■■□□ 2.9
MTA1-218	ENST00000550808	BLM	P54132	1417 aa	Predicted RBP	33.17	■■■□□ 2.9
MTA1-218	ENST00000550808	SPATA31A5	Q5VU36	1347 aa		33.16	■■■□□ 2.9
MTA1-218	ENST00000550808	SPATA31A7	Q8IWB4	1347 aa		33.16	■■■□□ 2.9
MTA1-218	ENST00000550808	NRK	Q7Z2Y5	1582 aa		33.14	■■■□□ 2.9
MTA1-218	ENST00000550808	CABP1	Q9NZU7	370 aa		33.14	■■■□□ 2.9
MTA1-218	ENST00000550808	STRN4	Q9NRL3	753 aa		33.13	■■■□□ 2.89
MTA1-218	ENST00000550808	EVC2	Q86UK5	1308 aa		33.12	■■■□□ 2.89
MTA1-218	ENST00000550808	SF3B2	Q13435	895 aa	Known RBP	33.09	■■■□□ 2.89
MTA1-218	ENST00000550808	ZRANB1	Q9UGI0	708 aa		33.09	■■■□□ 2.89
MTA1-218	ENST00000550808	USP19	O94966	1318 aa		33.08	■■■□□ 2.89
MTA1-218	ENST00000550808	DEFB132	Q7Z7B7	95 aa		33.08	■■■□□ 2.89
MTA1-218	ENST00000550808	NLRP13	Q86W25	1043 aa		33.08	■■■□□ 2.89
MTA1-218	ENST00000550808	THSD7A	Q9UPZ6	1657 aa		33.07	■■■□□ 2.89
MTA1-218	ENST00000550808	USP6	P35125	1406 aa		33.06	■■■□□ 2.88
MTA1-218	ENST00000550808	SPATA31A1	Q5TZJ5	1347 aa		33.05	■■■□□ 2.88
MTA1-218	ENST00000550808	EVA1C	P58658	441 aa		33.04	■■■□□ 2.88
MTA1-218	ENST00000550808	FAM182B	Q5T319	152 aa		33.04	■■■□□ 2.88
MTA1-218	ENST00000550808	BRD4	O60885	1362 aa	Predicted RBP	33.04	■■■□□ 2.88
MTA1-218	ENST00000550808	GC	P02774	474 aa		33.03	■■■□□ 2.88
MTA1-218	ENST00000550808	CAMTA1	Q9Y6Y1	1673 aa		33.03	■■■□□ 2.88
MTA1-218	ENST00000550808	LMO7	Q8WWI1	1683 aa		33.02	■■■□□ 2.88
MTA1-218	ENST00000550808	CPD	O75976	1380 aa		33.02	■■■□□ 2.88
MTA1-218	ENST00000550808	USP35	Q9P2H5	1018 aa		33.02	■■■□□ 2.88
MTA1-218	ENST00000550808	SSH2	Q76I76	1423 aa		33.01	■■■□□ 2.87
MTA1-218	ENST00000550808	NLRP6	P59044	892 aa		33	■■■□□ 2.87
MTA1-218	ENST00000550808	AKAP12	Q02952	1782 aa		33	■■■□□ 2.87
MTA1-218	ENST00000550808	PIK3C2A	O00443	1686 aa		33	■■■□□ 2.87
MTA1-218	ENST00000550808	TONSL	Q96HA7	1378 aa		32.99	■■■□□ 2.87
MTA1-218	ENST00000550808	ZBTB7C	A1YPR0	619 aa		32.99	■■■□□ 2.87
MTA1-218	ENST00000550808	LARP1	Q6PKG0	1096 aa	Known RBP	32.97	■■■□□ 2.87
MTA1-218	ENST00000550808	CARD11	Q9BXL7	1154 aa		32.97	■■■□□ 2.87
MTA1-218	ENST00000550808	RGPD1	P0DJD0	1748 aa		32.96	■■■□□ 2.87
MTA1-218	ENST00000550808	SLIT3	O75094	1523 aa		32.93	■■■□□ 2.86
MTA1-218	ENST00000550808	BAG6	P46379	1132 aa		32.91	■■■□□ 2.86
MTA1-218	ENST00000550808	TRIM26	Q12899	539 aa	Predicted RBP	32.91	■■■□□ 2.86
MTA1-218	ENST00000550808	ZNF692	Q9BU19	519 aa	Predicted RBP	32.91	■■■□□ 2.86
MTA1-218	ENST00000550808	TTC21B	Q7Z4L5	1316 aa		32.9	■■■□□ 2.86
MTA1-218	ENST00000550808	COL5A2	P05997	1499 aa	Predicted RBP	32.9	■■■□□ 2.86
MTA1-218	ENST00000550808	BARGIN	Q6ZT62	677 aa		32.89	■■■□□ 2.86
MTA1-218	ENST00000550808	TCP11L2	Q8N4U5	519 aa		32.88	■■■□□ 2.85
MTA1-218	ENST00000550808	TNS1	Q9HBL0	1735 aa	Known RBP	32.88	■■■□□ 2.85
MTA1-218	ENST00000550808	SBNO2	Q9Y2G9	1366 aa		32.87	■■■□□ 2.85
MTA1-218	ENST00000550808	KTN1	Q86UP2	1357 aa	Known RBP	32.86	■■■□□ 2.85
MTA1-218	ENST00000550808	CPSF1	Q10570	1443 aa	Known RBP	32.85	■■■□□ 2.85
MTA1-218	ENST00000550808	MON2	Q7Z3U7	1717 aa		32.85	■■■□□ 2.85
MTA1-218	ENST00000550808	COL18A1	P39060	1754 aa		32.85	■■■□□ 2.85
MTA1-218	ENST00000550808	AATK	Q6ZMQ8	1374 aa		32.84	■■■□□ 2.85
MTA1-218	ENST00000550808	SOX12	O15370	315 aa		32.84	■■■□□ 2.85
MTA1-218	ENST00000550808	EN1	Q05925	392 aa	Predicted RBP	32.84	■■■□□ 2.85
MTA1-218	ENST00000550808	RGPD5	Q99666	1765 aa		32.83	■■■□□ 2.85
MTA1-218	ENST00000550808	PDE3B	Q13370	1112 aa		32.83	■■■□□ 2.85
MTA1-218	ENST00000550808	FAM196A	Q6ZSG2	479 aa		32.83	■■■□□ 2.85
MTA1-218	ENST00000550808	TTC21A	Q8NDW8	1320 aa		32.82	■■■□□ 2.84
MTA1-218	ENST00000550808	TRIM37	O94972	964 aa		32.81	■■■□□ 2.84
MTA1-218	ENST00000550808	CRB1	P82279	1406 aa		32.81	■■■□□ 2.84
MTA1-218	ENST00000550808	THRAP3	Q9Y2W1	955 aa	Known RBP	32.8	■■■□□ 2.84
MTA1-218	ENST00000550808	TMC1	Q8TDI8	760 aa		32.79	■■■□□ 2.84
MTA1-218	ENST00000550808	PARP4	Q9UKK3	1724 aa	Known RBP	32.79	■■■□□ 2.84
MTA1-218	ENST00000550808	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.78	■■■□□ 2.84
MTA1-218	ENST00000550808	KCNH5	Q8NCM2	988 aa		32.78	■■■□□ 2.84
MTA1-218	ENST00000550808	AXIN2	Q9Y2T1	843 aa		32.77	■■■□□ 2.84
MTA1-218	ENST00000550808	SRCAP	Q6ZRS2	3230 aa		32.76	■■■□□ 2.84
MTA1-218	ENST00000550808	TOM1L2	Q6ZVM7	507 aa		32.76	■■■□□ 2.83
MTA1-218	ENST00000550808	CD163L1	Q9NR16	1453 aa		32.75	■■■□□ 2.83
MTA1-218	ENST00000550808	PSD	A5PKW4	1024 aa	Predicted RBP	32.75	■■■□□ 2.83
MTA1-218	ENST00000550808	ARHGEF25	Q86VW2	580 aa		32.75	■■■□□ 2.83
MTA1-218	ENST00000550808	DISP2	A7MBM2	1401 aa		32.74	■■■□□ 2.83
MTA1-218	ENST00000550808	NFAT5	O94916	1531 aa		32.73	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms