RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 AKAP12Q02952 1782 aa24.42■■□□□ 1.5
CDK4-207ENST00000550419 CD163L1Q9NR16 1453 aa24.41■■□□□ 1.5
CDK4-207ENST00000550419 LMOD2Q6P5Q4 547 aa24.41■■□□□ 1.5
CDK4-207ENST00000550419 SLC12A5Q9H2X9 1139 aa24.4■■□□□ 1.5
CDK4-207ENST00000550419 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
CDK4-207ENST00000550419 MEX3CQ5U5Q3 659 aaKnown RBP24.39■■□□□ 1.49
CDK4-207ENST00000550419 TMC1Q8TDI8 760 aa24.39■■□□□ 1.49
CDK4-207ENST00000550419 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
CDK4-207ENST00000550419 KTN1Q86UP2 1357 aaKnown RBP24.39■■□□□ 1.49
CDK4-207ENST00000550419 HDGFL2Q7Z4V5 671 aaPredicted RBP24.38■■□□□ 1.49
CDK4-207ENST00000550419 SOCS7O14512 581 aa24.37■■□□□ 1.49
CDK4-207ENST00000550419 MON2Q7Z3U7 1717 aa24.37■■□□□ 1.49
CDK4-207ENST00000550419 TTC21AQ8NDW8 1320 aa24.36■■□□□ 1.49
CDK4-207ENST00000550419 ABTB2Q8N961 1025 aa24.36■■□□□ 1.49
CDK4-207ENST00000550419 NRKQ7Z2Y5 1582 aa24.36■■□□□ 1.49
CDK4-207ENST00000550419 ABCA3Q99758 1704 aa24.35■■□□□ 1.49
CDK4-207ENST00000550419 ADAMTS2O95450 1211 aa24.35■■□□□ 1.49
CDK4-207ENST00000550419 CRYBG1Q9Y4K1 1723 aa24.35■■□□□ 1.49
CDK4-207ENST00000550419 TTC21BQ7Z4L5 1316 aa24.35■■□□□ 1.49
CDK4-207ENST00000550419 A0A1W2PP64 1363 aa24.34■■□□□ 1.49
CDK4-207ENST00000550419 CABLES1Q8TDN4 633 aa24.34■■□□□ 1.49
CDK4-207ENST00000550419 RGS17Q9UGC6 210 aaPredicted RBP24.34■■□□□ 1.49
CDK4-207ENST00000550419 MARF1Q9Y4F3 1742 aaKnown RBP24.33■■□□□ 1.49
CDK4-207ENST00000550419 ANKRD36BQ8N2N9 1353 aa24.33■■□□□ 1.49
CDK4-207ENST00000550419 NLRP13Q86W25 1043 aa24.33■■□□□ 1.49
CDK4-207ENST00000550419 EDC4Q6P2E9 1401 aaKnown RBP24.33■■□□□ 1.49
CDK4-207ENST00000550419 USP19O94966 1318 aa24.33■■□□□ 1.48
CDK4-207ENST00000550419 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
CDK4-207ENST00000550419 ZNF772Q68DY9 489 aaPredicted RBP24.31■■□□□ 1.48
CDK4-207ENST00000550419 FNBP4Q8N3X1 1017 aaPredicted RBP24.31■■□□□ 1.48
CDK4-207ENST00000550419 C8orf37Q96NL8 207 aa24.31■■□□□ 1.48
CDK4-207ENST00000550419 NGLY1Q96IV0 654 aa24.3■■□□□ 1.48
CDK4-207ENST00000550419 PIK3C2AO00443 1686 aa24.3■■□□□ 1.48
CDK4-207ENST00000550419 MYOM1P52179 1685 aa24.29■■□□□ 1.48
CDK4-207ENST00000550419 AFF2P51816 1311 aa24.29■■□□□ 1.48
CDK4-207ENST00000550419 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
CDK4-207ENST00000550419 NLRP6P59044 892 aa24.27■■□□□ 1.48
CDK4-207ENST00000550419 NUTM2GQ5VZR2 741 aa24.27■■□□□ 1.48
CDK4-207ENST00000550419 USP31Q70CQ4 1352 aa24.26■■□□□ 1.47
CDK4-207ENST00000550419 SLIT3O75094 1523 aa24.25■■□□□ 1.47
CDK4-207ENST00000550419 SLIT2O94813 1529 aa24.25■■□□□ 1.47
CDK4-207ENST00000550419 USP54Q70EL1 1684 aa24.24■■□□□ 1.47
CDK4-207ENST00000550419 C11orf95C9JLR9 678 aaPredicted RBP24.24■■□□□ 1.47
CDK4-207ENST00000550419 GCP02774 474 aa24.23■■□□□ 1.47
CDK4-207ENST00000550419 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
CDK4-207ENST00000550419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.23■■□□□ 1.47
CDK4-207ENST00000550419 CPDO75976 1380 aa24.23■■□□□ 1.47
CDK4-207ENST00000550419 PLEKHG5O94827 1062 aa24.22■■□□□ 1.47
CDK4-207ENST00000550419 BCL9LQ86UU0 1499 aa24.21■■□□□ 1.47
CDK4-207ENST00000550419 FAM83GA6ND36 823 aa24.21■■□□□ 1.47
CDK4-207ENST00000550419 POTEAQ6S8J7 498 aa24.21■■□□□ 1.47
CDK4-207ENST00000550419 USP21Q9UK80 565 aa24.21■■□□□ 1.47
CDK4-207ENST00000550419 KCNH5Q8NCM2 988 aa24.2■■□□□ 1.46
CDK4-207ENST00000550419 COL14A1Q05707 1796 aaKnown RBP24.2■■□□□ 1.46
CDK4-207ENST00000550419 NWD2Q9ULI1 1742 aa24.2■■□□□ 1.46
CDK4-207ENST00000550419 KIAA0232Q92628 1395 aa24.19■■□□□ 1.46
CDK4-207ENST00000550419 NME9Q86XW9 330 aa24.19■■□□□ 1.46
CDK4-207ENST00000550419 PRDM11Q9NQV5 511 aa24.19■■□□□ 1.46
CDK4-207ENST00000550419 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.18■■□□□ 1.46
CDK4-207ENST00000550419 KIF7Q2M1P5 1343 aa24.18■■□□□ 1.46
CDK4-207ENST00000550419 OVOS2A0A0J9YW53 1432 aa24.18■■□□□ 1.46
CDK4-207ENST00000550419 OVOS2Q6IE36 1432 aa24.18■■□□□ 1.46
CDK4-207ENST00000550419 UNC5CLQ8IV45 518 aa24.17■■□□□ 1.46
CDK4-207ENST00000550419 POLR3GLQ9BT43 218 aa24.17■■□□□ 1.46
CDK4-207ENST00000550419 CARD14Q9BXL6 1004 aa24.17■■□□□ 1.46
CDK4-207ENST00000550419 PLCH1Q4KWH8 1693 aa24.17■■□□□ 1.46
CDK4-207ENST00000550419 ZC3H6P61129 1189 aaKnown RBP24.16■■□□□ 1.46
CDK4-207ENST00000550419 QTRT2Q9H974 415 aaKnown RBP24.16■■□□□ 1.46
CDK4-207ENST00000550419 TRPC5Q9UL62 973 aaPredicted RBP24.16■■□□□ 1.46
CDK4-207ENST00000550419 ATRNO75882 1429 aa24.16■■□□□ 1.46
CDK4-207ENST00000550419 ZRANB1Q9UGI0 708 aa24.14■■□□□ 1.45
CDK4-207ENST00000550419 NFAT5O94916 1531 aa24.14■■□□□ 1.45
CDK4-207ENST00000550419 NSD3Q9BZ95 1437 aa24.13■■□□□ 1.45
CDK4-207ENST00000550419 FYB1O15117 783 aa24.13■■□□□ 1.45
CDK4-207ENST00000550419 BTG4Q9NY30 223 aa24.12■■□□□ 1.45
CDK4-207ENST00000550419 AATKQ6ZMQ8 1374 aa24.12■■□□□ 1.45
CDK4-207ENST00000550419 CCDC7Q96M83 1385 aa24.12■■□□□ 1.45
CDK4-207ENST00000550419 RXRBP28702 533 aa24.11■■□□□ 1.45
CDK4-207ENST00000550419 RBM6P78332 1123 aaKnown RBP24.11■■□□□ 1.45
CDK4-207ENST00000550419 ARHGEF25Q86VW2 580 aa24.11■■□□□ 1.45
CDK4-207ENST00000550419 COG3Q96JB2 828 aa24.11■■□□□ 1.45
CDK4-207ENST00000550419 CDK12Q9NYV4 1490 aaPredicted RBP24.11■■□□□ 1.45
CDK4-207ENST00000550419 LMO7Q8WWI1 1683 aa24.11■■□□□ 1.45
CDK4-207ENST00000550419 WASHC2AQ641Q2 1341 aa24.1■■□□□ 1.45
CDK4-207ENST00000550419 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
CDK4-207ENST00000550419 VPS72Q15906 364 aa24.1■■□□□ 1.45
CDK4-207ENST00000550419 PANK3Q9H999 370 aa24.1■■□□□ 1.45
CDK4-207ENST00000550419 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
CDK4-207ENST00000550419 CHRNA2Q15822 529 aa24.09■■□□□ 1.45
CDK4-207ENST00000550419 ABCC6O95255 1503 aa24.09■■□□□ 1.45
CDK4-207ENST00000550419 GJD4Q96KN9 370 aaPredicted RBP24.07■■□□□ 1.44
CDK4-207ENST00000550419 CAMTA1Q9Y6Y1 1673 aa24.07■■□□□ 1.44
CDK4-207ENST00000550419 KIF20BQ96Q89 1820 aa24.07■■□□□ 1.44
CDK4-207ENST00000550419 GGNBP2Q9H3C7 697 aa24.06■■□□□ 1.44
CDK4-207ENST00000550419 COL18A1P39060 1754 aa24.05■■□□□ 1.44
CDK4-207ENST00000550419 SOX12O15370 315 aa24.03■■□□□ 1.44
CDK4-207ENST00000550419 NSD2O96028 1365 aa24.03■■□□□ 1.44
CDK4-207ENST00000550419 COL5A2P05997 1499 aaPredicted RBP24.02■■□□□ 1.44
CDK4-207ENST00000550419 GLI3P10071 1580 aa24.01■■□□□ 1.43
CDK4-207ENST00000550419 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms