RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 SPATA31A3Q5VYP0 1347 aa23.88■■□□□ 1.41
BRF1-217ENST00000550375 ZNF692Q9BU19 519 aaPredicted RBP23.88■■□□□ 1.41
BRF1-217ENST00000550375 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
BRF1-217ENST00000550375 TNS3Q68CZ2 1445 aa23.87■■□□□ 1.41
BRF1-217ENST00000550375 A0A1W2PP64 1363 aa23.87■■□□□ 1.41
BRF1-217ENST00000550375 PNPLA6Q8IY17 1366 aa23.85■■□□□ 1.41
BRF1-217ENST00000550375 ALS2Q96Q42 1657 aa23.85■■□□□ 1.41
BRF1-217ENST00000550375 PLEKHG5O94827 1062 aa23.85■■□□□ 1.41
BRF1-217ENST00000550375 CCDC7Q96M83 1385 aa23.84■■□□□ 1.41
BRF1-217ENST00000550375 WASHC2AQ641Q2 1341 aa23.84■■□□□ 1.41
BRF1-217ENST00000550375 ANKRD36BQ8N2N9 1353 aa23.83■■□□□ 1.41
BRF1-217ENST00000550375 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
BRF1-217ENST00000550375 NRKQ7Z2Y5 1582 aa23.83■■□□□ 1.4
BRF1-217ENST00000550375 NUTM2GQ5VZR2 741 aa23.81■■□□□ 1.4
BRF1-217ENST00000550375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
BRF1-217ENST00000550375 SSH2Q76I76 1423 aa23.81■■□□□ 1.4
BRF1-217ENST00000550375 ARHGEF10O15013 1369 aa23.81■■□□□ 1.4
BRF1-217ENST00000550375 TTC21BQ7Z4L5 1316 aa23.81■■□□□ 1.4
BRF1-217ENST00000550375 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
BRF1-217ENST00000550375 BRD4O60885 1362 aaPredicted RBP23.8■■□□□ 1.4
BRF1-217ENST00000550375 COL22A1Q8NFW1 1626 aaPredicted RBP23.8■■□□□ 1.4
BRF1-217ENST00000550375 NUTM2BA6NNL0 878 aaPredicted RBP23.79■■□□□ 1.4
BRF1-217ENST00000550375 NUTM2EB1AL46 878 aaPredicted RBP23.79■■□□□ 1.4
BRF1-217ENST00000550375 NUTM2AQ8IVF1 878 aaPredicted RBP23.79■■□□□ 1.4
BRF1-217ENST00000550375 EDC4Q6P2E9 1401 aaKnown RBP23.78■■□□□ 1.4
BRF1-217ENST00000550375 PIK3C2AO00443 1686 aa23.77■■□□□ 1.4
BRF1-217ENST00000550375 CABLES1Q8TDN4 633 aa23.77■■□□□ 1.4
BRF1-217ENST00000550375 PANK3Q9H999 370 aa23.77■■□□□ 1.4
BRF1-217ENST00000550375 SPATA31A6Q5VVP1 1343 aa23.76■■□□□ 1.39
BRF1-217ENST00000550375 TTC21AQ8NDW8 1320 aa23.76■■□□□ 1.39
BRF1-217ENST00000550375 CARD14Q9BXL6 1004 aa23.76■■□□□ 1.39
BRF1-217ENST00000550375 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
BRF1-217ENST00000550375 NLRP6P59044 892 aa23.74■■□□□ 1.39
BRF1-217ENST00000550375 NME9Q86XW9 330 aa23.74■■□□□ 1.39
BRF1-217ENST00000550375 NSD3Q9BZ95 1437 aa23.74■■□□□ 1.39
BRF1-217ENST00000550375 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
BRF1-217ENST00000550375 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
BRF1-217ENST00000550375 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
BRF1-217ENST00000550375 CRYBG1Q9Y4K1 1723 aa23.72■■□□□ 1.39
BRF1-217ENST00000550375 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
BRF1-217ENST00000550375 LRP6O75581 1613 aa23.72■■□□□ 1.39
BRF1-217ENST00000550375 KIF20BQ96Q89 1820 aa23.7■■□□□ 1.39
BRF1-217ENST00000550375 ADAMTS2O95450 1211 aa23.7■■□□□ 1.38
BRF1-217ENST00000550375 MARF1Q9Y4F3 1742 aaKnown RBP23.7■■□□□ 1.38
BRF1-217ENST00000550375 PHRF1Q9P1Y6 1649 aaKnown RBP23.7■■□□□ 1.38
BRF1-217ENST00000550375 MEX3CQ5U5Q3 659 aaKnown RBP23.68■■□□□ 1.38
BRF1-217ENST00000550375 USP19O94966 1318 aa23.66■■□□□ 1.38
BRF1-217ENST00000550375 FYB1O15117 783 aa23.65■■□□□ 1.38
BRF1-217ENST00000550375 GGNBP2Q9H3C7 697 aa23.65■■□□□ 1.38
BRF1-217ENST00000550375 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
BRF1-217ENST00000550375 SOX12O15370 315 aa23.65■■□□□ 1.38
BRF1-217ENST00000550375 USP31Q70CQ4 1352 aa23.65■■□□□ 1.38
BRF1-217ENST00000550375 USP54Q70EL1 1684 aa23.64■■□□□ 1.37
BRF1-217ENST00000550375 CGNL1Q0VF96 1302 aa23.64■■□□□ 1.37
BRF1-217ENST00000550375 KNSTRNQ9Y448 316 aa23.64■■□□□ 1.37
BRF1-217ENST00000550375 COG3Q96JB2 828 aa23.63■■□□□ 1.37
BRF1-217ENST00000550375 SLIT3O75094 1523 aa23.62■■□□□ 1.37
BRF1-217ENST00000550375 GCP02774 474 aa23.62■■□□□ 1.37
BRF1-217ENST00000550375 ZC3H6P61129 1189 aaKnown RBP23.62■■□□□ 1.37
BRF1-217ENST00000550375 C8orf37Q96NL8 207 aa23.62■■□□□ 1.37
BRF1-217ENST00000550375 OVOS2A0A0J9YW53 1432 aa23.61■■□□□ 1.37
BRF1-217ENST00000550375 OVOS2Q6IE36 1432 aa23.61■■□□□ 1.37
BRF1-217ENST00000550375 ZBTB7CA1YPR0 619 aa23.6■■□□□ 1.37
BRF1-217ENST00000550375 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
BRF1-217ENST00000550375 POTEAQ6S8J7 498 aa23.6■■□□□ 1.37
BRF1-217ENST00000550375 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
BRF1-217ENST00000550375 KCNH5Q8NCM2 988 aa23.58■■□□□ 1.37
BRF1-217ENST00000550375 NGLY1Q96IV0 654 aa23.58■■□□□ 1.37
BRF1-217ENST00000550375 ANKRD26Q9UPS8 1709 aa23.58■■□□□ 1.36
BRF1-217ENST00000550375 KIAA0232Q92628 1395 aa23.58■■□□□ 1.36
BRF1-217ENST00000550375 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
BRF1-217ENST00000550375 PRDM11Q9NQV5 511 aa23.56■■□□□ 1.36
BRF1-217ENST00000550375 FAM83GA6ND36 823 aa23.55■■□□□ 1.36
BRF1-217ENST00000550375 CHRNA2Q15822 529 aa23.55■■□□□ 1.36
BRF1-217ENST00000550375 NFAT5O94916 1531 aa23.55■■□□□ 1.36
BRF1-217ENST00000550375 FBLN1P23142 703 aa23.54■■□□□ 1.36
BRF1-217ENST00000550375 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
BRF1-217ENST00000550375 PLCH1Q4KWH8 1693 aa23.54■■□□□ 1.36
BRF1-217ENST00000550375 COL14A1Q05707 1796 aaKnown RBP23.54■■□□□ 1.36
BRF1-217ENST00000550375 CC2D1BQ5T0F9 858 aaKnown RBP23.53■■□□□ 1.36
BRF1-217ENST00000550375 LTN1O94822 1766 aa23.53■■□□□ 1.36
BRF1-217ENST00000550375 AFF2P51816 1311 aa23.53■■□□□ 1.36
BRF1-217ENST00000550375 NSD2O96028 1365 aa23.53■■□□□ 1.36
BRF1-217ENST00000550375 CPDO75976 1380 aa23.52■■□□□ 1.36
BRF1-217ENST00000550375 TNNT2P45379 298 aaPredicted RBP23.51■■□□□ 1.35
BRF1-217ENST00000550375 MORC1Q86VD1 984 aa23.5■■□□□ 1.35
BRF1-217ENST00000550375 ARHGEF25Q86VW2 580 aa23.5■■□□□ 1.35
BRF1-217ENST00000550375 RGPD5Q99666 1765 aa23.48■■□□□ 1.35
BRF1-217ENST00000550375 RRS1Q15050 365 aaKnown RBP23.48■■□□□ 1.35
BRF1-217ENST00000550375 FNBP4Q8N3X1 1017 aaPredicted RBP23.48■■□□□ 1.35
BRF1-217ENST00000550375 BTG4Q9NY30 223 aa23.48■■□□□ 1.35
BRF1-217ENST00000550375 USP21Q9UK80 565 aa23.48■■□□□ 1.35
BRF1-217ENST00000550375 MAP2P11137 1827 aaKnown RBP23.48■■□□□ 1.35
BRF1-217ENST00000550375 SLIT2O94813 1529 aa23.47■■□□□ 1.35
BRF1-217ENST00000550375 NWD2Q9ULI1 1742 aa23.47■■□□□ 1.35
BRF1-217ENST00000550375 COL18A1P39060 1754 aa23.47■■□□□ 1.35
BRF1-217ENST00000550375 LMO7Q8WWI1 1683 aa23.46■■□□□ 1.35
BRF1-217ENST00000550375 MAP3K19Q56UN5 1328 aa23.45■■□□□ 1.34
BRF1-217ENST00000550375 AATKQ6ZMQ8 1374 aa23.45■■□□□ 1.34
BRF1-217ENST00000550375 NPC1L1Q9UHC9 1359 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms