RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
AC055716.1-201ENST00000550077 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
AC055716.1-201ENST00000550077 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
AC055716.1-201ENST00000550077 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
AC055716.1-201ENST00000550077 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
AC055716.1-201ENST00000550077 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
AC055716.1-201ENST00000550077 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
AC055716.1-201ENST00000550077 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
AC055716.1-201ENST00000550077 APBA3O96018 575 aa13.06□□□□□ -0.32
AC055716.1-201ENST00000550077 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
AC055716.1-201ENST00000550077 PHRF1Q9P1Y6 1649 aaKnown RBP13.04□□□□□ -0.32
AC055716.1-201ENST00000550077 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
AC055716.1-201ENST00000550077 PRDM11Q9NQV5 511 aa13.03□□□□□ -0.32
AC055716.1-201ENST00000550077 STRN4Q9NRL3 753 aa13.03□□□□□ -0.32
AC055716.1-201ENST00000550077 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
AC055716.1-201ENST00000550077 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
AC055716.1-201ENST00000550077 ANKARQ7Z5J8 1434 aa13.03□□□□□ -0.32
AC055716.1-201ENST00000550077 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.33
AC055716.1-201ENST00000550077 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
AC055716.1-201ENST00000550077 MPHOSPH9Q99550 1183 aa13.02□□□□□ -0.33
AC055716.1-201ENST00000550077 PDGFDQ9GZP0 370 aaPredicted RBP13.02□□□□□ -0.33
AC055716.1-201ENST00000550077 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
AC055716.1-201ENST00000550077 DHX57Q6P158 1386 aaKnown RBP13.02□□□□□ -0.33
AC055716.1-201ENST00000550077 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
AC055716.1-201ENST00000550077 ZC3H6P61129 1189 aaKnown RBP13.01□□□□□ -0.33
AC055716.1-201ENST00000550077 ADGRB1O14514 1584 aa13□□□□□ -0.33
AC055716.1-201ENST00000550077 DLC1Q96QB1 1528 aa13□□□□□ -0.33
AC055716.1-201ENST00000550077 POGKQ9P215 609 aa13□□□□□ -0.33
AC055716.1-201ENST00000550077 TRAK1Q9UPV9 953 aa13□□□□□ -0.33
AC055716.1-201ENST00000550077 SBF2Q86WG5 1849 aa12.99□□□□□ -0.33
AC055716.1-201ENST00000550077 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
AC055716.1-201ENST00000550077 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
AC055716.1-201ENST00000550077 KCNQ2O43526 872 aa12.99□□□□□ -0.33
AC055716.1-201ENST00000550077 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
AC055716.1-201ENST00000550077 TULP4Q9NRJ4 1543 aa12.98□□□□□ -0.33
AC055716.1-201ENST00000550077 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
AC055716.1-201ENST00000550077 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 MYOM1P52179 1685 aa12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 LMO7Q8WWI1 1683 aa12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 SPON1Q9HCB6 807 aa12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 NRKQ7Z2Y5 1582 aa12.97□□□□□ -0.33
AC055716.1-201ENST00000550077 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
AC055716.1-201ENST00000550077 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.33
AC055716.1-201ENST00000550077 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
AC055716.1-201ENST00000550077 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
AC055716.1-201ENST00000550077 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
AC055716.1-201ENST00000550077 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
AC055716.1-201ENST00000550077 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
AC055716.1-201ENST00000550077 PARP4Q9UKK3 1724 aaKnown RBP12.94□□□□□ -0.34
AC055716.1-201ENST00000550077 ATP7BP35670 1465 aa12.94□□□□□ -0.34
AC055716.1-201ENST00000550077 ZNF784Q8NCA9 323 aaPredicted RBP12.94□□□□□ -0.34
AC055716.1-201ENST00000550077 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
AC055716.1-201ENST00000550077 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
AC055716.1-201ENST00000550077 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
AC055716.1-201ENST00000550077 EVA1CP58658 441 aa12.93□□□□□ -0.34
AC055716.1-201ENST00000550077 PROM2Q8N271 834 aa12.93□□□□□ -0.34
AC055716.1-201ENST00000550077 ZBTB7AO95365 584 aa12.92□□□□□ -0.34
AC055716.1-201ENST00000550077 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
AC055716.1-201ENST00000550077 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
AC055716.1-201ENST00000550077 PTGER2P43116 358 aa12.91□□□□□ -0.34
AC055716.1-201ENST00000550077 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
AC055716.1-201ENST00000550077 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
AC055716.1-201ENST00000550077 RGPD3A6NKT7 1758 aaPredicted RBP12.9□□□□□ -0.34
AC055716.1-201ENST00000550077 RGPD4Q7Z3J3 1758 aa12.9□□□□□ -0.34
AC055716.1-201ENST00000550077 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
AC055716.1-201ENST00000550077 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
AC055716.1-201ENST00000550077 ACEP12821 1306 aa12.88□□□□□ -0.35
AC055716.1-201ENST00000550077 CHD4Q14839 1912 aa12.88□□□□□ -0.35
AC055716.1-201ENST00000550077 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
AC055716.1-201ENST00000550077 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
AC055716.1-201ENST00000550077 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
AC055716.1-201ENST00000550077 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
AC055716.1-201ENST00000550077 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
AC055716.1-201ENST00000550077 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
AC055716.1-201ENST00000550077 COL18A1P39060 1754 aa12.86□□□□□ -0.35
AC055716.1-201ENST00000550077 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
AC055716.1-201ENST00000550077 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
AC055716.1-201ENST00000550077 PLSCR1O15162 318 aa12.86□□□□□ -0.35
AC055716.1-201ENST00000550077 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
AC055716.1-201ENST00000550077 FHDC1Q9C0D6 1143 aaPredicted RBP12.86□□□□□ -0.35
AC055716.1-201ENST00000550077 USP19O94966 1318 aa12.86□□□□□ -0.35
AC055716.1-201ENST00000550077 CPDO75976 1380 aa12.85□□□□□ -0.35
AC055716.1-201ENST00000550077 UTRNP46939 3433 aa12.85□□□□□ -0.35
AC055716.1-201ENST00000550077 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
AC055716.1-201ENST00000550077 SYT17Q9BSW7 474 aa12.85□□□□□ -0.35
AC055716.1-201ENST00000550077 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 GCP02774 474 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 C1QTNF8P60827 252 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 DCAF11Q8TEB1 546 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
AC055716.1-201ENST00000550077 CRB1P82279 1406 aa12.83□□□□□ -0.36
AC055716.1-201ENST00000550077 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
AC055716.1-201ENST00000550077 THRAP3Q9Y2W1 955 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms