RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 NGDNQ8NEJ9 315 aaKnown RBP16.74■□□□□ 0.27
PFDN5-208ENST00000549995 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.73■□□□□ 0.27
PFDN5-208ENST00000549995 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
PFDN5-208ENST00000549995 CABP1Q9NZU7 370 aa16.73■□□□□ 0.27
PFDN5-208ENST00000549995 SLIT3O75094 1523 aa16.72■□□□□ 0.27
PFDN5-208ENST00000549995 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
PFDN5-208ENST00000549995 NWD2Q9ULI1 1742 aa16.71■□□□□ 0.27
PFDN5-208ENST00000549995 CDCA8Q53HL2 280 aa16.71■□□□□ 0.27
PFDN5-208ENST00000549995 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
PFDN5-208ENST00000549995 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
PFDN5-208ENST00000549995 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
PFDN5-208ENST00000549995 A0A1W2PP64 1363 aa16.69■□□□□ 0.26
PFDN5-208ENST00000549995 ANKRD36BQ8N2N9 1353 aa16.69■□□□□ 0.26
PFDN5-208ENST00000549995 USP19O94966 1318 aa16.69■□□□□ 0.26
PFDN5-208ENST00000549995 COL14A1Q05707 1796 aaKnown RBP16.68■□□□□ 0.26
PFDN5-208ENST00000549995 TTC21AQ8NDW8 1320 aa16.68■□□□□ 0.26
PFDN5-208ENST00000549995 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
PFDN5-208ENST00000549995 KTN1Q86UP2 1357 aaKnown RBP16.67■□□□□ 0.26
PFDN5-208ENST00000549995 USP31Q70CQ4 1352 aa16.66■□□□□ 0.26
PFDN5-208ENST00000549995 SLIT2O94813 1529 aa16.66■□□□□ 0.26
PFDN5-208ENST00000549995 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
PFDN5-208ENST00000549995 TTC21BQ7Z4L5 1316 aa16.66■□□□□ 0.26
PFDN5-208ENST00000549995 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
PFDN5-208ENST00000549995 SLC12A5Q9H2X9 1139 aa16.65■□□□□ 0.26
PFDN5-208ENST00000549995 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
PFDN5-208ENST00000549995 NFAT5O94916 1531 aa16.64■□□□□ 0.25
PFDN5-208ENST00000549995 ABCC6O95255 1503 aa16.64■□□□□ 0.25
PFDN5-208ENST00000549995 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
PFDN5-208ENST00000549995 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
PFDN5-208ENST00000549995 ANKRD26Q9UPS8 1709 aa16.63■□□□□ 0.25
PFDN5-208ENST00000549995 RGS17Q9UGC6 210 aaPredicted RBP16.63■□□□□ 0.25
PFDN5-208ENST00000549995 COL18A1P39060 1754 aa16.62■□□□□ 0.25
PFDN5-208ENST00000549995 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
PFDN5-208ENST00000549995 CPDO75976 1380 aa16.62■□□□□ 0.25
PFDN5-208ENST00000549995 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
PFDN5-208ENST00000549995 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
PFDN5-208ENST00000549995 C11orf95C9JLR9 678 aaPredicted RBP16.6■□□□□ 0.25
PFDN5-208ENST00000549995 TMC1Q8TDI8 760 aa16.6■□□□□ 0.25
PFDN5-208ENST00000549995 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
PFDN5-208ENST00000549995 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
PFDN5-208ENST00000549995 PAK3O75914 559 aaPredicted RBP16.59■□□□□ 0.25
PFDN5-208ENST00000549995 NUTM2AQ8IVF1 878 aaPredicted RBP16.59■□□□□ 0.25
PFDN5-208ENST00000549995 ABTB2Q8N961 1025 aa16.59■□□□□ 0.25
PFDN5-208ENST00000549995 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
PFDN5-208ENST00000549995 LTN1O94822 1766 aa16.58■□□□□ 0.24
PFDN5-208ENST00000549995 ATRNO75882 1429 aa16.57■□□□□ 0.24
PFDN5-208ENST00000549995 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
PFDN5-208ENST00000549995 CABLES1Q8TDN4 633 aa16.57■□□□□ 0.24
PFDN5-208ENST00000549995 AFF2P51816 1311 aa16.56■□□□□ 0.24
PFDN5-208ENST00000549995 ZEB1P37275 1124 aaPredicted RBP16.56■□□□□ 0.24
PFDN5-208ENST00000549995 MEX3CQ5U5Q3 659 aaKnown RBP16.56■□□□□ 0.24
PFDN5-208ENST00000549995 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
PFDN5-208ENST00000549995 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
PFDN5-208ENST00000549995 CCDC7Q96M83 1385 aa16.55■□□□□ 0.24
PFDN5-208ENST00000549995 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
PFDN5-208ENST00000549995 ZNF772Q68DY9 489 aaPredicted RBP16.55■□□□□ 0.24
PFDN5-208ENST00000549995 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
PFDN5-208ENST00000549995 GCP02774 474 aa16.54■□□□□ 0.24
PFDN5-208ENST00000549995 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
PFDN5-208ENST00000549995 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
PFDN5-208ENST00000549995 KIAA0232Q92628 1395 aa16.53■□□□□ 0.24
PFDN5-208ENST00000549995 GLI3P10071 1580 aa16.53■□□□□ 0.24
PFDN5-208ENST00000549995 NLRP6P59044 892 aa16.53■□□□□ 0.24
PFDN5-208ENST00000549995 CARD14Q9BXL6 1004 aa16.53■□□□□ 0.24
PFDN5-208ENST00000549995 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
PFDN5-208ENST00000549995 NME9Q86XW9 330 aa16.52■□□□□ 0.24
PFDN5-208ENST00000549995 KCNH5Q8NCM2 988 aa16.52■□□□□ 0.24
PFDN5-208ENST00000549995 RGPD5Q99666 1765 aa16.51■□□□□ 0.23
PFDN5-208ENST00000549995 WASHC2AQ641Q2 1341 aa16.51■□□□□ 0.23
PFDN5-208ENST00000549995 FAM83GA6ND36 823 aa16.51■□□□□ 0.23
PFDN5-208ENST00000549995 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
PFDN5-208ENST00000549995 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
PFDN5-208ENST00000549995 NGLY1Q96IV0 654 aa16.51■□□□□ 0.23
PFDN5-208ENST00000549995 AATKQ6ZMQ8 1374 aa16.51■□□□□ 0.23
PFDN5-208ENST00000549995 FAM208AQ9UK61 1670 aaKnown RBP16.5■□□□□ 0.23
PFDN5-208ENST00000549995 WNK3Q9BYP7 1800 aa16.5■□□□□ 0.23
PFDN5-208ENST00000549995 HAP1P54257 671 aaPredicted RBP16.5■□□□□ 0.23
PFDN5-208ENST00000549995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.5■□□□□ 0.23
PFDN5-208ENST00000549995 COL5A2P05997 1499 aaPredicted RBP16.49■□□□□ 0.23
PFDN5-208ENST00000549995 FYB1O15117 783 aa16.49■□□□□ 0.23
PFDN5-208ENST00000549995 ARHGEF25Q86VW2 580 aa16.49■□□□□ 0.23
PFDN5-208ENST00000549995 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
PFDN5-208ENST00000549995 USP21Q9UK80 565 aa16.49■□□□□ 0.23
PFDN5-208ENST00000549995 NSD2O96028 1365 aa16.49■□□□□ 0.23
PFDN5-208ENST00000549995 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
PFDN5-208ENST00000549995 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
PFDN5-208ENST00000549995 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
PFDN5-208ENST00000549995 TRPC5Q9UL62 973 aaPredicted RBP16.47■□□□□ 0.23
PFDN5-208ENST00000549995 PEAK1Q9H792 1746 aa16.46■□□□□ 0.23
PFDN5-208ENST00000549995 VPS72Q15906 364 aa16.46■□□□□ 0.23
PFDN5-208ENST00000549995 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
PFDN5-208ENST00000549995 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
PFDN5-208ENST00000549995 PANK3Q9H999 370 aa16.45■□□□□ 0.22
PFDN5-208ENST00000549995 RTL1A6NKG5 1358 aa16.45■□□□□ 0.22
PFDN5-208ENST00000549995 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
PFDN5-208ENST00000549995 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
PFDN5-208ENST00000549995 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
PFDN5-208ENST00000549995 PER1O15534 1290 aaPredicted RBP16.44■□□□□ 0.22
PFDN5-208ENST00000549995 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
PFDN5-208ENST00000549995 COG3Q96JB2 828 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms