RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 INSRP06213 1382 aa18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 PMFBP1Q8TBY8 1022 aa18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 CFAP53Q96M91 514 aa18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 PHF8Q9UPP1 1060 aa18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 ANKRD26Q9UPS8 1709 aa18.34■□□□□ 0.53
CALCOCO1-214ENST00000549613 USP6P35125 1406 aa18.33■□□□□ 0.53
CALCOCO1-214ENST00000549613 TMEM94Q12767 1356 aa18.33■□□□□ 0.53
CALCOCO1-214ENST00000549613 KIF20BQ96Q89 1820 aa18.33■□□□□ 0.53
CALCOCO1-214ENST00000549613 TTC21AQ8NDW8 1320 aa18.33■□□□□ 0.53
CALCOCO1-214ENST00000549613 ATF3P18847 181 aa18.32■□□□□ 0.52
CALCOCO1-214ENST00000549613 TNNT2P45379 298 aaPredicted RBP18.32■□□□□ 0.52
CALCOCO1-214ENST00000549613 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.52
CALCOCO1-214ENST00000549613 COG3Q96JB2 828 aa18.32■□□□□ 0.52
CALCOCO1-214ENST00000549613 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
CALCOCO1-214ENST00000549613 MTHFSP49914 203 aa18.3■□□□□ 0.52
CALCOCO1-214ENST00000549613 PIP4K2BP78356 416 aa18.3■□□□□ 0.52
CALCOCO1-214ENST00000549613 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
CALCOCO1-214ENST00000549613 NME9Q86XW9 330 aa18.3■□□□□ 0.52
CALCOCO1-214ENST00000549613 DCCP43146 1447 aa18.3■□□□□ 0.52
CALCOCO1-214ENST00000549613 STRCP1A6NGW2 1772 aa18.3■□□□□ 0.52
CALCOCO1-214ENST00000549613 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
CALCOCO1-214ENST00000549613 SSH2Q76I76 1423 aa18.29■□□□□ 0.52
CALCOCO1-214ENST00000549613 MSH6P52701 1360 aa18.28■□□□□ 0.52
CALCOCO1-214ENST00000549613 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
CALCOCO1-214ENST00000549613 PSME1Q06323 249 aa18.25■□□□□ 0.51
CALCOCO1-214ENST00000549613 ADAMTS8Q9UP79 889 aa18.25■□□□□ 0.51
CALCOCO1-214ENST00000549613 NRKQ7Z2Y5 1582 aa18.25■□□□□ 0.51
CALCOCO1-214ENST00000549613 ZBED9Q6R2W3 1325 aa18.24■□□□□ 0.51
CALCOCO1-214ENST00000549613 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
CALCOCO1-214ENST00000549613 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
CALCOCO1-214ENST00000549613 C1orf167Q5SNV9 1468 aa18.24■□□□□ 0.51
CALCOCO1-214ENST00000549613 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
CALCOCO1-214ENST00000549613 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
CALCOCO1-214ENST00000549613 TOM1O60784 492 aa18.22■□□□□ 0.51
CALCOCO1-214ENST00000549613 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
CALCOCO1-214ENST00000549613 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
CALCOCO1-214ENST00000549613 BLMP54132 1417 aaPredicted RBP18.21■□□□□ 0.51
CALCOCO1-214ENST00000549613 KIF1AQ12756 1690 aa18.2■□□□□ 0.5
CALCOCO1-214ENST00000549613 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
CALCOCO1-214ENST00000549613 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
CALCOCO1-214ENST00000549613 MST1RQ04912 1400 aa18.2■□□□□ 0.5
CALCOCO1-214ENST00000549613 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
CALCOCO1-214ENST00000549613 NLRP6P59044 892 aa18.19■□□□□ 0.5
CALCOCO1-214ENST00000549613 ABTB2Q8N961 1025 aa18.19■□□□□ 0.5
CALCOCO1-214ENST00000549613 PNPLA6Q8IY17 1366 aa18.18■□□□□ 0.5
CALCOCO1-214ENST00000549613 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
CALCOCO1-214ENST00000549613 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
CALCOCO1-214ENST00000549613 FOXO3O43524 673 aa18.17■□□□□ 0.5
CALCOCO1-214ENST00000549613 KRT28Q7Z3Y7 464 aa18.17■□□□□ 0.5
CALCOCO1-214ENST00000549613 NGEFQ8N5V2 710 aa18.17■□□□□ 0.5
CALCOCO1-214ENST00000549613 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
CALCOCO1-214ENST00000549613 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
CALCOCO1-214ENST00000549613 XIRP1Q702N8 1843 aaKnown RBP18.16■□□□□ 0.5
CALCOCO1-214ENST00000549613 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
CALCOCO1-214ENST00000549613 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO1-214ENST00000549613 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
CALCOCO1-214ENST00000549613 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
CALCOCO1-214ENST00000549613 RGS17Q9UGC6 210 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO1-214ENST00000549613 EMILIN1Q9Y6C2 1016 aa18.14■□□□□ 0.49
CALCOCO1-214ENST00000549613 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO1-214ENST00000549613 CDK12Q9NYV4 1490 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO1-214ENST00000549613 NPHP3Q7Z494 1330 aa18.13■□□□□ 0.49
CALCOCO1-214ENST00000549613 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 USP54Q70EL1 1684 aa18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 FBLN1P23142 703 aa18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 RRS1Q15050 365 aaKnown RBP18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 KCNH5Q8NCM2 988 aa18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 SLAIN2Q9P270 581 aa18.12■□□□□ 0.49
CALCOCO1-214ENST00000549613 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
CALCOCO1-214ENST00000549613 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
CALCOCO1-214ENST00000549613 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
CALCOCO1-214ENST00000549613 SBNO1A3KN83 1393 aa18.09■□□□□ 0.49
CALCOCO1-214ENST00000549613 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
CALCOCO1-214ENST00000549613 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
CALCOCO1-214ENST00000549613 FCHSD2O94868 740 aa18.08■□□□□ 0.48
CALCOCO1-214ENST00000549613 IL13P35225 146 aa18.08■□□□□ 0.48
CALCOCO1-214ENST00000549613 AMPHP49418 695 aa18.08■□□□□ 0.48
CALCOCO1-214ENST00000549613 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.48
CALCOCO1-214ENST00000549613 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
CALCOCO1-214ENST00000549613 APAF1O14727 1248 aa18.07■□□□□ 0.48
CALCOCO1-214ENST00000549613 SOX12O15370 315 aa18.07■□□□□ 0.48
CALCOCO1-214ENST00000549613 NEFMP07197 916 aa18.07■□□□□ 0.48
CALCOCO1-214ENST00000549613 LMOD2Q6P5Q4 547 aa18.07■□□□□ 0.48
CALCOCO1-214ENST00000549613 FLT4P35916 1363 aa18.06■□□□□ 0.48
CALCOCO1-214ENST00000549613 BRINP3Q76B58 766 aa18.06■□□□□ 0.48
CALCOCO1-214ENST00000549613 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
CALCOCO1-214ENST00000549613 TRPM3Q9HCF6 1732 aaPredicted RBP18.05■□□□□ 0.48
CALCOCO1-214ENST00000549613 MAPK8IP3Q9UPT6 1336 aa18.04■□□□□ 0.48
CALCOCO1-214ENST00000549613 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
CALCOCO1-214ENST00000549613 EIF4A2Q14240 407 aaKnown RBP18.03■□□□□ 0.48
CALCOCO1-214ENST00000549613 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
CALCOCO1-214ENST00000549613 MARF1Q9Y4F3 1742 aaKnown RBP18.03■□□□□ 0.48
CALCOCO1-214ENST00000549613 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
CALCOCO1-214ENST00000549613 USP19O94966 1318 aa18.02■□□□□ 0.48
CALCOCO1-214ENST00000549613 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms