RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
GCN1-202ENST00000547263 SLIT2O94813 1529 aa15.48■□□□□ 0.07
GCN1-202ENST00000547263 POTEAQ6S8J7 498 aa15.48■□□□□ 0.07
GCN1-202ENST00000547263 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
GCN1-202ENST00000547263 NWD2Q9ULI1 1742 aa15.48■□□□□ 0.07
GCN1-202ENST00000547263 NUTM2BA6NNL0 878 aaPredicted RBP15.47■□□□□ 0.07
GCN1-202ENST00000547263 NUTM2EB1AL46 878 aaPredicted RBP15.47■□□□□ 0.07
GCN1-202ENST00000547263 NUTM2AQ8IVF1 878 aaPredicted RBP15.47■□□□□ 0.07
GCN1-202ENST00000547263 CABP1Q9NZU7 370 aa15.47■□□□□ 0.07
GCN1-202ENST00000547263 PIK3C2AO00443 1686 aa15.47■□□□□ 0.07
GCN1-202ENST00000547263 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.06
GCN1-202ENST00000547263 USP19O94966 1318 aa15.45■□□□□ 0.06
GCN1-202ENST00000547263 PLCH1Q4KWH8 1693 aa15.45■□□□□ 0.06
GCN1-202ENST00000547263 ZNF772Q68DY9 489 aaPredicted RBP15.45■□□□□ 0.06
GCN1-202ENST00000547263 NINLQ9Y2I6 1382 aa15.45■□□□□ 0.06
GCN1-202ENST00000547263 AFF2P51816 1311 aa15.44■□□□□ 0.06
GCN1-202ENST00000547263 SLIT3O75094 1523 aa15.44■□□□□ 0.06
GCN1-202ENST00000547263 NRAPQ86VF7 1730 aa15.44■□□□□ 0.06
GCN1-202ENST00000547263 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
GCN1-202ENST00000547263 CDK12Q9NYV4 1490 aaPredicted RBP15.44■□□□□ 0.06
GCN1-202ENST00000547263 MEX3CQ5U5Q3 659 aaKnown RBP15.43■□□□□ 0.06
GCN1-202ENST00000547263 MYOM1P52179 1685 aa15.43■□□□□ 0.06
GCN1-202ENST00000547263 COL14A1Q05707 1796 aaKnown RBP15.43■□□□□ 0.06
GCN1-202ENST00000547263 ATRNO75882 1429 aa15.43■□□□□ 0.06
GCN1-202ENST00000547263 ADAMTS2O95450 1211 aa15.42■□□□□ 0.06
GCN1-202ENST00000547263 C8orf37Q96NL8 207 aa15.42■□□□□ 0.06
GCN1-202ENST00000547263 CABLES1Q8TDN4 633 aa15.41■□□□□ 0.06
GCN1-202ENST00000547263 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
GCN1-202ENST00000547263 TTC21AQ8NDW8 1320 aa15.4■□□□□ 0.06
GCN1-202ENST00000547263 CPDO75976 1380 aa15.39■□□□□ 0.05
GCN1-202ENST00000547263 TMF1P82094 1093 aa15.39■□□□□ 0.05
GCN1-202ENST00000547263 NGLY1Q96IV0 654 aa15.39■□□□□ 0.05
GCN1-202ENST00000547263 TTC21BQ7Z4L5 1316 aa15.39■□□□□ 0.05
GCN1-202ENST00000547263 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
GCN1-202ENST00000547263 USP31Q70CQ4 1352 aa15.38■□□□□ 0.05
GCN1-202ENST00000547263 EDC4Q6P2E9 1401 aaKnown RBP15.38■□□□□ 0.05
GCN1-202ENST00000547263 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
GCN1-202ENST00000547263 KTN1Q86UP2 1357 aaKnown RBP15.37■□□□□ 0.05
GCN1-202ENST00000547263 GLI3P10071 1580 aa15.37■□□□□ 0.05
GCN1-202ENST00000547263 COL18A1P39060 1754 aa15.37■□□□□ 0.05
GCN1-202ENST00000547263 PAK3O75914 559 aaPredicted RBP15.37■□□□□ 0.05
GCN1-202ENST00000547263 USP21Q9UK80 565 aa15.37■□□□□ 0.05
GCN1-202ENST00000547263 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
GCN1-202ENST00000547263 FAM83GA6ND36 823 aa15.36■□□□□ 0.05
GCN1-202ENST00000547263 SOCS7O14512 581 aa15.36■□□□□ 0.05
GCN1-202ENST00000547263 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
GCN1-202ENST00000547263 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
GCN1-202ENST00000547263 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
GCN1-202ENST00000547263 NFAT5O94916 1531 aa15.36■□□□□ 0.05
GCN1-202ENST00000547263 EIF4G2P78344 907 aaKnown RBP eCLIP15.35■□□□□ 0.05
GCN1-202ENST00000547263 UNC5CLQ8IV45 518 aa15.35■□□□□ 0.05
GCN1-202ENST00000547263 QTRT2Q9H974 415 aaKnown RBP15.35■□□□□ 0.05
GCN1-202ENST00000547263 TRPC5Q9UL62 973 aaPredicted RBP15.35■□□□□ 0.05
GCN1-202ENST00000547263 RBM6P78332 1123 aaKnown RBP15.34■□□□□ 0.05
GCN1-202ENST00000547263 CDCA8Q53HL2 280 aa15.34■□□□□ 0.05
GCN1-202ENST00000547263 KIAA0232Q92628 1395 aa15.34■□□□□ 0.05
GCN1-202ENST00000547263 OVOS2A0A0J9YW53 1432 aa15.34■□□□□ 0.05
GCN1-202ENST00000547263 RGS12O14924 1447 aa15.34■□□□□ 0.05
GCN1-202ENST00000547263 OVOS2Q6IE36 1432 aa15.34■□□□□ 0.05
GCN1-202ENST00000547263 ABCC6O95255 1503 aa15.33■□□□□ 0.05
GCN1-202ENST00000547263 GCP02774 474 aa15.33■□□□□ 0.04
GCN1-202ENST00000547263 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.04
GCN1-202ENST00000547263 RXRBP28702 533 aa15.33■□□□□ 0.04
GCN1-202ENST00000547263 TERF2IPQ9NYB0 399 aa15.33■□□□□ 0.04
GCN1-202ENST00000547263 CAMTA1Q9Y6Y1 1673 aa15.32■□□□□ 0.04
GCN1-202ENST00000547263 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
GCN1-202ENST00000547263 VPS72Q15906 364 aa15.31■□□□□ 0.04
GCN1-202ENST00000547263 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
GCN1-202ENST00000547263 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
GCN1-202ENST00000547263 HAP1P54257 671 aaPredicted RBP15.3■□□□□ 0.04
GCN1-202ENST00000547263 NLRP6P59044 892 aa15.3■□□□□ 0.04
GCN1-202ENST00000547263 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
GCN1-202ENST00000547263 GJD4Q96KN9 370 aaPredicted RBP15.3■□□□□ 0.04
GCN1-202ENST00000547263 AATKQ6ZMQ8 1374 aa15.29■□□□□ 0.04
GCN1-202ENST00000547263 PRDM11Q9NQV5 511 aa15.29■□□□□ 0.04
GCN1-202ENST00000547263 ARHGEF25Q86VW2 580 aa15.28■□□□□ 0.04
GCN1-202ENST00000547263 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
GCN1-202ENST00000547263 KIF20BQ96Q89 1820 aa15.28■□□□□ 0.04
GCN1-202ENST00000547263 THSD7AQ9UPZ6 1657 aa15.28■□□□□ 0.04
GCN1-202ENST00000547263 COL5A2P05997 1499 aaPredicted RBP15.27■□□□□ 0.04
GCN1-202ENST00000547263 ZC3H6P61129 1189 aaKnown RBP15.27■□□□□ 0.04
GCN1-202ENST00000547263 NME9Q86XW9 330 aa15.27■□□□□ 0.04
GCN1-202ENST00000547263 KCNH5Q8NCM2 988 aa15.27■□□□□ 0.04
GCN1-202ENST00000547263 LTN1O94822 1766 aa15.26■□□□□ 0.03
GCN1-202ENST00000547263 C11orf95C9JLR9 678 aaPredicted RBP15.26■□□□□ 0.03
GCN1-202ENST00000547263 BRWD3Q6RI45 1802 aa15.26■□□□□ 0.03
GCN1-202ENST00000547263 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
GCN1-202ENST00000547263 SPATA31A5Q5VU36 1347 aa15.25■□□□□ 0.03
GCN1-202ENST00000547263 SPATA31A7Q8IWB4 1347 aa15.25■□□□□ 0.03
GCN1-202ENST00000547263 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
GCN1-202ENST00000547263 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
GCN1-202ENST00000547263 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
GCN1-202ENST00000547263 CHRNA2Q15822 529 aa15.24■□□□□ 0.03
GCN1-202ENST00000547263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
GCN1-202ENST00000547263 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
GCN1-202ENST00000547263 FYB1O15117 783 aa15.23■□□□□ 0.03
GCN1-202ENST00000547263 SPATA31A1Q5TZJ5 1347 aa15.22■□□□□ 0.03
GCN1-202ENST00000547263 WNK3Q9BYP7 1800 aa15.22■□□□□ 0.03
GCN1-202ENST00000547263 NSD3Q9BZ95 1437 aa15.21■□□□□ 0.03
GCN1-202ENST00000547263 CRB1P82279 1406 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms