RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 CENPJQ9HC77 1338 aaPredicted RBP20.73■□□□□ 0.91
COL2A1-209ENST00000546974 CRYBG1Q9Y4K1 1723 aa20.73■□□□□ 0.91
COL2A1-209ENST00000546974 POLR3AO14802 1390 aaPredicted RBP20.72■□□□□ 0.91
COL2A1-209ENST00000546974 PLEKHG3A1L390 1219 aa20.72■□□□□ 0.91
COL2A1-209ENST00000546974 COL14A1Q05707 1796 aaKnown RBP20.72■□□□□ 0.91
COL2A1-209ENST00000546974 CCDC125Q86Z20 511 aa20.71■□□□□ 0.91
COL2A1-209ENST00000546974 BRWD3Q6RI45 1802 aa20.71■□□□□ 0.91
COL2A1-209ENST00000546974 NRAPQ86VF7 1730 aa20.7■□□□□ 0.9
COL2A1-209ENST00000546974 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
COL2A1-209ENST00000546974 NBPF8Q3BBV2 869 aa20.7■□□□□ 0.9
COL2A1-209ENST00000546974 CCDC9Q9Y3X0 531 aaKnown RBP20.7■□□□□ 0.9
COL2A1-209ENST00000546974 ACEP12821 1306 aa20.7■□□□□ 0.9
COL2A1-209ENST00000546974 BTG4Q9NY30 223 aa20.69■□□□□ 0.9
COL2A1-209ENST00000546974 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
COL2A1-209ENST00000546974 SEPT12Q8IYM1 358 aa20.68■□□□□ 0.9
COL2A1-209ENST00000546974 TRPM1Q7Z4N2 1603 aa20.67■□□□□ 0.9
COL2A1-209ENST00000546974 QRICH2Q9H0J4 1663 aa20.67■□□□□ 0.9
COL2A1-209ENST00000546974 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
COL2A1-209ENST00000546974 PHRF1Q9P1Y6 1649 aaKnown RBP20.65■□□□□ 0.9
COL2A1-209ENST00000546974 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
COL2A1-209ENST00000546974 PPIP5K1Q6PFW1 1433 aa20.64■□□□□ 0.89
COL2A1-209ENST00000546974 PRDM11Q9NQV5 511 aa20.64■□□□□ 0.89
COL2A1-209ENST00000546974 KIAA0232Q92628 1395 aa20.62■□□□□ 0.89
COL2A1-209ENST00000546974 KRT27Q7Z3Y8 459 aa20.62■□□□□ 0.89
COL2A1-209ENST00000546974 ABTB2Q8N961 1025 aa20.62■□□□□ 0.89
COL2A1-209ENST00000546974 ROCK2O75116 1388 aaKnown RBP20.61■□□□□ 0.89
COL2A1-209ENST00000546974 NUTM2GQ5VZR2 741 aa20.61■□□□□ 0.89
COL2A1-209ENST00000546974 BLMP54132 1417 aaPredicted RBP20.61■□□□□ 0.89
COL2A1-209ENST00000546974 BRD4O60885 1362 aaPredicted RBP20.6■□□□□ 0.89
COL2A1-209ENST00000546974 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
COL2A1-209ENST00000546974 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
COL2A1-209ENST00000546974 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
COL2A1-209ENST00000546974 EVC2Q86UK5 1308 aa20.59■□□□□ 0.89
COL2A1-209ENST00000546974 ZC3H6P61129 1189 aaKnown RBP20.59■□□□□ 0.89
COL2A1-209ENST00000546974 A0A0G2JS52 829 aa20.58■□□□□ 0.89
COL2A1-209ENST00000546974 MYT1Q01538 1121 aa20.58■□□□□ 0.89
COL2A1-209ENST00000546974 CHRNA2Q15822 529 aa20.58■□□□□ 0.89
COL2A1-209ENST00000546974 CABP1Q9NZU7 370 aa20.58■□□□□ 0.89
COL2A1-209ENST00000546974 SRCAPQ6ZRS2 3230 aa20.58■□□□□ 0.88
COL2A1-209ENST00000546974 USP19O94966 1318 aa20.57■□□□□ 0.88
COL2A1-209ENST00000546974 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
COL2A1-209ENST00000546974 NRKQ7Z2Y5 1582 aa20.56■□□□□ 0.88
COL2A1-209ENST00000546974 SF3B2Q13435 895 aaKnown RBP20.55■□□□□ 0.88
COL2A1-209ENST00000546974 ZRANB1Q9UGI0 708 aa20.55■□□□□ 0.88
COL2A1-209ENST00000546974 CPDO75976 1380 aa20.55■□□□□ 0.88
COL2A1-209ENST00000546974 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
COL2A1-209ENST00000546974 USP6P35125 1406 aa20.54■□□□□ 0.88
COL2A1-209ENST00000546974 STRN4Q9NRL3 753 aa20.53■□□□□ 0.88
COL2A1-209ENST00000546974 THSD7AQ9UPZ6 1657 aa20.53■□□□□ 0.88
COL2A1-209ENST00000546974 GCP02774 474 aa20.52■□□□□ 0.88
COL2A1-209ENST00000546974 EVA1CP58658 441 aa20.51■□□□□ 0.87
COL2A1-209ENST00000546974 DEFB132Q7Z7B7 95 aa20.51■□□□□ 0.87
COL2A1-209ENST00000546974 SSH2Q76I76 1423 aa20.51■□□□□ 0.87
COL2A1-209ENST00000546974 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
COL2A1-209ENST00000546974 ZNF692Q9BU19 519 aaPredicted RBP20.5■□□□□ 0.87
COL2A1-209ENST00000546974 CAMTA1Q9Y6Y1 1673 aa20.5■□□□□ 0.87
COL2A1-209ENST00000546974 NLRP6P59044 892 aa20.49■□□□□ 0.87
COL2A1-209ENST00000546974 AKAP12Q02952 1782 aa20.49■□□□□ 0.87
COL2A1-209ENST00000546974 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
COL2A1-209ENST00000546974 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
COL2A1-209ENST00000546974 CARD11Q9BXL7 1154 aa20.48■□□□□ 0.87
COL2A1-209ENST00000546974 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
COL2A1-209ENST00000546974 BARGINQ6ZT62 677 aa20.47■□□□□ 0.87
COL2A1-209ENST00000546974 SLIT3O75094 1523 aa20.47■□□□□ 0.87
COL2A1-209ENST00000546974 PIK3C2AO00443 1686 aa20.46■□□□□ 0.87
COL2A1-209ENST00000546974 LARP1Q6PKG0 1096 aaKnown RBP20.46■□□□□ 0.87
COL2A1-209ENST00000546974 RGPD1P0DJD0 1748 aa20.45■□□□□ 0.86
COL2A1-209ENST00000546974 BAG6P46379 1132 aa20.45■□□□□ 0.86
COL2A1-209ENST00000546974 USP35Q9P2H5 1018 aa20.45■□□□□ 0.86
COL2A1-209ENST00000546974 TTC21BQ7Z4L5 1316 aa20.45■□□□□ 0.86
COL2A1-209ENST00000546974 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
COL2A1-209ENST00000546974 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
COL2A1-209ENST00000546974 THRAP3Q9Y2W1 955 aaKnown RBP20.44■□□□□ 0.86
COL2A1-209ENST00000546974 COL5A2P05997 1499 aaPredicted RBP20.43■□□□□ 0.86
COL2A1-209ENST00000546974 TCP11L2Q8N4U5 519 aa20.43■□□□□ 0.86
COL2A1-209ENST00000546974 TTC21AQ8NDW8 1320 aa20.43■□□□□ 0.86
COL2A1-209ENST00000546974 AATKQ6ZMQ8 1374 aa20.43■□□□□ 0.86
COL2A1-209ENST00000546974 FAM196AQ6ZSG2 479 aa20.41■□□□□ 0.86
COL2A1-209ENST00000546974 ZBTB7CA1YPR0 619 aa20.4■□□□□ 0.86
COL2A1-209ENST00000546974 COL18A1P39060 1754 aa20.4■□□□□ 0.86
COL2A1-209ENST00000546974 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
COL2A1-209ENST00000546974 KCNH5Q8NCM2 988 aa20.4■□□□□ 0.86
COL2A1-209ENST00000546974 MON2Q7Z3U7 1717 aa20.39■□□□□ 0.86
COL2A1-209ENST00000546974 CRB1P82279 1406 aa20.39■□□□□ 0.85
COL2A1-209ENST00000546974 PDE3BQ13370 1112 aa20.39■□□□□ 0.85
COL2A1-209ENST00000546974 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.85
COL2A1-209ENST00000546974 DISP2A7MBM2 1401 aa20.37■□□□□ 0.85
COL2A1-209ENST00000546974 EN1Q05925 392 aaPredicted RBP20.37■□□□□ 0.85
COL2A1-209ENST00000546974 ARHGEF25Q86VW2 580 aa20.37■□□□□ 0.85
COL2A1-209ENST00000546974 PUS7Q96PZ0 661 aaKnown RBP20.37■□□□□ 0.85
COL2A1-209ENST00000546974 PARP4Q9UKK3 1724 aaKnown RBP20.36■□□□□ 0.85
COL2A1-209ENST00000546974 TRIM37O94972 964 aa20.35■□□□□ 0.85
COL2A1-209ENST00000546974 AXIN2Q9Y2T1 843 aa20.35■□□□□ 0.85
COL2A1-209ENST00000546974 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
COL2A1-209ENST00000546974 RGPD5Q99666 1765 aa20.34■□□□□ 0.85
COL2A1-209ENST00000546974 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
COL2A1-209ENST00000546974 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
COL2A1-209ENST00000546974 WDR17Q8IZU2 1322 aa20.33■□□□□ 0.85
COL2A1-209ENST00000546974 TOM1L2Q6ZVM7 507 aa20.33■□□□□ 0.85
COL2A1-209ENST00000546974 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms