RNA–Protein interactions for RNA: ENST00000546799.1

GDF11-202, Transcript of growth differentiation factor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene GDF11, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF11-202ENST00000546799 TRPC5Q9UL62 973 aaPredicted RBP28.49■■■□□ 2.15
GDF11-202ENST00000546799 PAK3O75914 559 aaPredicted RBP28.48■■■□□ 2.15
GDF11-202ENST00000546799 PPIP5K1Q6PFW1 1433 aa28.48■■■□□ 2.15
GDF11-202ENST00000546799 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.48■■■□□ 2.15
GDF11-202ENST00000546799 PLCH1Q4KWH8 1693 aa28.46■■■□□ 2.15
GDF11-202ENST00000546799 FAM83GA6ND36 823 aa28.45■■■□□ 2.14
GDF11-202ENST00000546799 HAP1P54257 671 aaPredicted RBP28.45■■■□□ 2.14
GDF11-202ENST00000546799 UNC5CLQ8IV45 518 aa28.44■■■□□ 2.14
GDF11-202ENST00000546799 CARD11Q9BXL7 1154 aa28.43■■■□□ 2.14
GDF11-202ENST00000546799 PCGF6Q9BYE7 350 aa28.42■■■□□ 2.14
GDF11-202ENST00000546799 CABP1Q9NZU7 370 aa28.42■■■□□ 2.14
GDF11-202ENST00000546799 EVC2Q86UK5 1308 aa28.42■■■□□ 2.14
GDF11-202ENST00000546799 GLI3P10071 1580 aa28.41■■■□□ 2.14
GDF11-202ENST00000546799 NUTM2GQ5VZR2 741 aa28.41■■■□□ 2.14
GDF11-202ENST00000546799 NWD2Q9ULI1 1742 aa28.4■■■□□ 2.14
GDF11-202ENST00000546799 GJD4Q96KN9 370 aaPredicted RBP28.39■■■□□ 2.14
GDF11-202ENST00000546799 PHRF1Q9P1Y6 1649 aaKnown RBP28.39■■■□□ 2.13
GDF11-202ENST00000546799 UPF1Q92900 1129 aaKnown RBP eCLIP28.38■■■□□ 2.13
GDF11-202ENST00000546799 NRAPQ86VF7 1730 aa28.37■■■□□ 2.13
GDF11-202ENST00000546799 SBNO2Q9Y2G9 1366 aa28.37■■■□□ 2.13
GDF11-202ENST00000546799 COL14A1Q05707 1796 aaKnown RBP28.34■■■□□ 2.13
GDF11-202ENST00000546799 EP400Q96L91 3159 aa28.34■■■□□ 2.13
GDF11-202ENST00000546799 USP6P35125 1406 aa28.34■■■□□ 2.13
GDF11-202ENST00000546799 SSH2Q76I76 1423 aa28.34■■■□□ 2.13
GDF11-202ENST00000546799 VPS72Q15906 364 aa28.32■■■□□ 2.12
GDF11-202ENST00000546799 ABTB2Q8N961 1025 aa28.32■■■□□ 2.12
GDF11-202ENST00000546799 BTG4Q9NY30 223 aa28.31■■■□□ 2.12
GDF11-202ENST00000546799 NRKQ7Z2Y5 1582 aa28.31■■■□□ 2.12
GDF11-202ENST00000546799 KIAA0232Q92628 1395 aa28.3■■■□□ 2.12
GDF11-202ENST00000546799 USP19O94966 1318 aa28.3■■■□□ 2.12
GDF11-202ENST00000546799 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
GDF11-202ENST00000546799 ZC3H6P61129 1189 aaKnown RBP28.27■■■□□ 2.12
GDF11-202ENST00000546799 CHRNA2Q15822 529 aa28.27■■■□□ 2.12
GDF11-202ENST00000546799 TESK2Q96S53 571 aa28.27■■■□□ 2.12
GDF11-202ENST00000546799 PRDM11Q9NQV5 511 aa28.27■■■□□ 2.12
GDF11-202ENST00000546799 CPSF1Q10570 1443 aaKnown RBP28.26■■■□□ 2.12
GDF11-202ENST00000546799 BRD4O60885 1362 aaPredicted RBP28.26■■■□□ 2.12
GDF11-202ENST00000546799 PIK3C2AO00443 1686 aa28.26■■■□□ 2.12
GDF11-202ENST00000546799 ATAD2Q6PL18 1390 aa28.25■■■□□ 2.11
GDF11-202ENST00000546799 BRWD3Q6RI45 1802 aa28.25■■■□□ 2.11
GDF11-202ENST00000546799 CD163L1Q9NR16 1453 aa28.24■■■□□ 2.11
GDF11-202ENST00000546799 ST20-MTHFSA0A0A6YYL1 179 aa28.24■■■□□ 2.11
GDF11-202ENST00000546799 CLSPNQ9HAW4 1339 aa28.22■■■□□ 2.11
GDF11-202ENST00000546799 ONECUT3O60422 494 aaPredicted RBP28.22■■■□□ 2.11
GDF11-202ENST00000546799 NLRP13Q86W25 1043 aa28.22■■■□□ 2.11
GDF11-202ENST00000546799 GCP02774 474 aa28.21■■■□□ 2.11
GDF11-202ENST00000546799 TTC21BQ7Z4L5 1316 aa28.2■■■□□ 2.11
GDF11-202ENST00000546799 SLIT3O75094 1523 aa28.2■■■□□ 2.1
GDF11-202ENST00000546799 CCDC9Q9Y3X0 531 aaKnown RBP28.2■■■□□ 2.1
GDF11-202ENST00000546799 CPDO75976 1380 aa28.2■■■□□ 2.1
GDF11-202ENST00000546799 LMO7Q8WWI1 1683 aa28.19■■■□□ 2.1
GDF11-202ENST00000546799 MON2Q7Z3U7 1717 aa28.19■■■□□ 2.1
GDF11-202ENST00000546799 SEPT12Q8IYM1 358 aa28.19■■■□□ 2.1
GDF11-202ENST00000546799 CAMTA1Q9Y6Y1 1673 aa28.19■■■□□ 2.1
GDF11-202ENST00000546799 NLRP6P59044 892 aa28.18■■■□□ 2.1
GDF11-202ENST00000546799 ZNF692Q9BU19 519 aaPredicted RBP28.18■■■□□ 2.1
GDF11-202ENST00000546799 SLC12A5Q9H2X9 1139 aa28.18■■■□□ 2.1
GDF11-202ENST00000546799 SPATA31A5Q5VU36 1347 aa28.18■■■□□ 2.1
GDF11-202ENST00000546799 SPATA31A7Q8IWB4 1347 aa28.18■■■□□ 2.1
GDF11-202ENST00000546799 KTN1Q86UP2 1357 aaKnown RBP28.16■■■□□ 2.1
GDF11-202ENST00000546799 TIMELESSQ9UNS1 1208 aa28.16■■■□□ 2.1
GDF11-202ENST00000546799 FAM98CQ17RN3 349 aaKnown RBP28.15■■■□□ 2.1
GDF11-202ENST00000546799 USP47Q96K76 1375 aa28.14■■■□□ 2.1
GDF11-202ENST00000546799 ZRANB1Q9UGI0 708 aa28.13■■■□□ 2.09
GDF11-202ENST00000546799 TMC1Q8TDI8 760 aa28.12■■■□□ 2.09
GDF11-202ENST00000546799 PUS7Q96PZ0 661 aaKnown RBP28.12■■■□□ 2.09
GDF11-202ENST00000546799 STRN4Q9NRL3 753 aa28.12■■■□□ 2.09
GDF11-202ENST00000546799 SPATA31A1Q5TZJ5 1347 aa28.11■■■□□ 2.09
GDF11-202ENST00000546799 TTC21AQ8NDW8 1320 aa28.11■■■□□ 2.09
GDF11-202ENST00000546799 COL18A1P39060 1754 aa28.1■■■□□ 2.09
GDF11-202ENST00000546799 THSD7AQ9UPZ6 1657 aa28.1■■■□□ 2.09
GDF11-202ENST00000546799 A0A1W2PP64 1363 aa28.09■■■□□ 2.09
GDF11-202ENST00000546799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.08■■■□□ 2.09
GDF11-202ENST00000546799 CCER1Q8TC90 406 aaPredicted RBP28.08■■■□□ 2.09
GDF11-202ENST00000546799 LARP1Q6PKG0 1096 aaKnown RBP28.07■■■□□ 2.08
GDF11-202ENST00000546799 KRT27Q7Z3Y8 459 aa28.06■■■□□ 2.08
GDF11-202ENST00000546799 NME9Q86XW9 330 aa28.06■■■□□ 2.08
GDF11-202ENST00000546799 COL5A2P05997 1499 aaPredicted RBP28.06■■■□□ 2.08
GDF11-202ENST00000546799 NFAT5O94916 1531 aa28.06■■■□□ 2.08
GDF11-202ENST00000546799 USP54Q70EL1 1684 aa28.04■■■□□ 2.08
GDF11-202ENST00000546799 AATKQ6ZMQ8 1374 aa28.04■■■□□ 2.08
GDF11-202ENST00000546799 USP31Q70CQ4 1352 aa28.04■■■□□ 2.08
GDF11-202ENST00000546799 ZBTB7CA1YPR0 619 aa28.04■■■□□ 2.08
GDF11-202ENST00000546799 AXIN2Q9Y2T1 843 aa28.04■■■□□ 2.08
GDF11-202ENST00000546799 SOX12O15370 315 aa28.03■■■□□ 2.08
GDF11-202ENST00000546799 EVA1CP58658 441 aa28.03■■■□□ 2.08
GDF11-202ENST00000546799 ARHGEF25Q86VW2 580 aa28.03■■■□□ 2.08
GDF11-202ENST00000546799 EDC4Q6P2E9 1401 aaKnown RBP28.02■■■□□ 2.08
GDF11-202ENST00000546799 A0A0G2JS52 829 aa28.02■■■□□ 2.08
GDF11-202ENST00000546799 MYT1Q01538 1121 aa28.02■■■□□ 2.08
GDF11-202ENST00000546799 HDGFL2Q7Z4V5 671 aaPredicted RBP28.02■■■□□ 2.08
GDF11-202ENST00000546799 USP35Q9P2H5 1018 aa28.02■■■□□ 2.08
GDF11-202ENST00000546799 RGPD5Q99666 1765 aa28.01■■■□□ 2.07
GDF11-202ENST00000546799 FAM182BQ5T319 152 aa28■■■□□ 2.07
GDF11-202ENST00000546799 TERF2IPQ9NYB0 399 aa28■■■□□ 2.07
GDF11-202ENST00000546799 KCNH5Q8NCM2 988 aa27.98■■■□□ 2.07
GDF11-202ENST00000546799 NINLQ9Y2I6 1382 aa27.98■■■□□ 2.07
GDF11-202ENST00000546799 SLC24A1O60721 1099 aa27.97■■■□□ 2.07
GDF11-202ENST00000546799 TMF1P82094 1093 aa27.97■■■□□ 2.07
GDF11-202ENST00000546799 BLMP54132 1417 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms