RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 ANKRD36BQ8N2N9 1353 aa15.39■□□□□ 0.05
TROAP-204ENST00000546776 PANK3Q9H999 370 aa15.39■□□□□ 0.05
TROAP-204ENST00000546776 CABP1Q9NZU7 370 aa15.39■□□□□ 0.05
TROAP-204ENST00000546776 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
TROAP-204ENST00000546776 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
TROAP-204ENST00000546776 LRP6O75581 1613 aa15.38■□□□□ 0.05
TROAP-204ENST00000546776 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
TROAP-204ENST00000546776 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
TROAP-204ENST00000546776 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
TROAP-204ENST00000546776 ADAMTS2O95450 1211 aa15.37■□□□□ 0.05
TROAP-204ENST00000546776 ILDR2Q71H61 639 aa15.37■□□□□ 0.05
TROAP-204ENST00000546776 TNS3Q68CZ2 1445 aa15.36■□□□□ 0.05
TROAP-204ENST00000546776 NGLY1Q96IV0 654 aa15.36■□□□□ 0.05
TROAP-204ENST00000546776 C8orf37Q96NL8 207 aa15.36■□□□□ 0.05
TROAP-204ENST00000546776 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
TROAP-204ENST00000546776 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
TROAP-204ENST00000546776 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
TROAP-204ENST00000546776 RGS17Q9UGC6 210 aaPredicted RBP15.35■□□□□ 0.05
TROAP-204ENST00000546776 COL22A1Q8NFW1 1626 aaPredicted RBP15.35■□□□□ 0.05
TROAP-204ENST00000546776 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
TROAP-204ENST00000546776 MON2Q7Z3U7 1717 aa15.34■□□□□ 0.05
TROAP-204ENST00000546776 KTN1Q86UP2 1357 aaKnown RBP15.34■□□□□ 0.05
TROAP-204ENST00000546776 CD163L1Q9NR16 1453 aa15.33■□□□□ 0.05
TROAP-204ENST00000546776 ACEP12821 1306 aa15.33■□□□□ 0.04
TROAP-204ENST00000546776 AFF2P51816 1311 aa15.33■□□□□ 0.04
TROAP-204ENST00000546776 POLR3AO14802 1390 aaPredicted RBP15.33■□□□□ 0.04
TROAP-204ENST00000546776 CPSF1Q10570 1443 aaKnown RBP15.33■□□□□ 0.04
TROAP-204ENST00000546776 NSD3Q9BZ95 1437 aa15.33■□□□□ 0.04
TROAP-204ENST00000546776 ANP32CO43423 234 aa15.32■□□□□ 0.04
TROAP-204ENST00000546776 PER1O15534 1290 aaPredicted RBP15.31■□□□□ 0.04
TROAP-204ENST00000546776 POTEAQ6S8J7 498 aa15.31■□□□□ 0.04
TROAP-204ENST00000546776 CGNL1Q0VF96 1302 aa15.31■□□□□ 0.04
TROAP-204ENST00000546776 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
TROAP-204ENST00000546776 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
TROAP-204ENST00000546776 KIF20BQ96Q89 1820 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 USP6P35125 1406 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 NSD2O96028 1365 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 SOCS7O14512 581 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 CARD14Q9BXL6 1004 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 USP21Q9UK80 565 aa15.29■□□□□ 0.04
TROAP-204ENST00000546776 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
TROAP-204ENST00000546776 RXRBP28702 533 aa15.28■□□□□ 0.04
TROAP-204ENST00000546776 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
TROAP-204ENST00000546776 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.04
TROAP-204ENST00000546776 CABLES1Q8TDN4 633 aa15.27■□□□□ 0.04
TROAP-204ENST00000546776 QTRT2Q9H974 415 aaKnown RBP15.27■□□□□ 0.04
TROAP-204ENST00000546776 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
TROAP-204ENST00000546776 ANKRD26Q9UPS8 1709 aa15.26■□□□□ 0.03
TROAP-204ENST00000546776 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
TROAP-204ENST00000546776 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
TROAP-204ENST00000546776 RALBP1Q15311 655 aa15.25■□□□□ 0.03
TROAP-204ENST00000546776 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
TROAP-204ENST00000546776 RBM6P78332 1123 aaKnown RBP15.24■□□□□ 0.03
TROAP-204ENST00000546776 CC2D1BQ5T0F9 858 aaKnown RBP15.24■□□□□ 0.03
TROAP-204ENST00000546776 NLRP13Q86W25 1043 aa15.24■□□□□ 0.03
TROAP-204ENST00000546776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
TROAP-204ENST00000546776 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
TROAP-204ENST00000546776 ALS2Q96Q42 1657 aa15.23■□□□□ 0.03
TROAP-204ENST00000546776 SSH2Q76I76 1423 aa15.23■□□□□ 0.03
TROAP-204ENST00000546776 CNGB1Q14028 1251 aaPredicted RBP15.22■□□□□ 0.03
TROAP-204ENST00000546776 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
TROAP-204ENST00000546776 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
TROAP-204ENST00000546776 MARF1Q9Y4F3 1742 aaKnown RBP15.21■□□□□ 0.03
TROAP-204ENST00000546776 FYB1O15117 783 aa15.21■□□□□ 0.03
TROAP-204ENST00000546776 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.03
TROAP-204ENST00000546776 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
TROAP-204ENST00000546776 PARD3Q8TEW0 1356 aa15.21■□□□□ 0.02
TROAP-204ENST00000546776 NLRP6P59044 892 aa15.2■□□□□ 0.02
TROAP-204ENST00000546776 COG3Q96JB2 828 aa15.2■□□□□ 0.02
TROAP-204ENST00000546776 PRDM11Q9NQV5 511 aa15.2■□□□□ 0.02
TROAP-204ENST00000546776 FAM83GA6ND36 823 aa15.19■□□□□ 0.02
TROAP-204ENST00000546776 GGNBP2Q9H3C7 697 aa15.19■□□□□ 0.02
TROAP-204ENST00000546776 CDK12Q9NYV4 1490 aaPredicted RBP15.19■□□□□ 0.02
TROAP-204ENST00000546776 PIK3C2AO00443 1686 aa15.19■□□□□ 0.02
TROAP-204ENST00000546776 USP54Q70EL1 1684 aa15.19■□□□□ 0.02
TROAP-204ENST00000546776 NME9Q86XW9 330 aa15.18■□□□□ 0.02
TROAP-204ENST00000546776 USP31Q70CQ4 1352 aa15.18■□□□□ 0.02
TROAP-204ENST00000546776 BCL9LQ86UU0 1499 aa15.18■□□□□ 0.02
TROAP-204ENST00000546776 MYBBP1AQ9BQG0 1328 aaKnown RBP15.17■□□□□ 0.02
TROAP-204ENST00000546776 ATRNO75882 1429 aa15.17■□□□□ 0.02
TROAP-204ENST00000546776 SLIT2O94813 1529 aa15.17■□□□□ 0.02
TROAP-204ENST00000546776 MIER1Q8N108 512 aa15.17■□□□□ 0.02
TROAP-204ENST00000546776 GJD4Q96KN9 370 aaPredicted RBP15.17■□□□□ 0.02
TROAP-204ENST00000546776 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
TROAP-204ENST00000546776 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
TROAP-204ENST00000546776 VPS72Q15906 364 aa15.16■□□□□ 0.02
TROAP-204ENST00000546776 BTG4Q9NY30 223 aa15.16■□□□□ 0.02
TROAP-204ENST00000546776 USP19O94966 1318 aa15.16■□□□□ 0.02
TROAP-204ENST00000546776 KIAA0232Q92628 1395 aa15.15■□□□□ 0.02
TROAP-204ENST00000546776 GCP02774 474 aa15.15■□□□□ 0.02
TROAP-204ENST00000546776 ZC3H6P61129 1189 aaKnown RBP15.15■□□□□ 0.02
TROAP-204ENST00000546776 KCNH5Q8NCM2 988 aa15.15■□□□□ 0.02
TROAP-204ENST00000546776 OVOS2A0A0J9YW53 1432 aa15.15■□□□□ 0.02
TROAP-204ENST00000546776 OVOS2Q6IE36 1432 aa15.15■□□□□ 0.02
TROAP-204ENST00000546776 COL14A1Q05707 1796 aaKnown RBP15.14■□□□□ 0.01
TROAP-204ENST00000546776 CCER2I3L3R5 266 aa15.14■□□□□ 0.01
TROAP-204ENST00000546776 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
TROAP-204ENST00000546776 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms