RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 TRPM3Q9HCF6 1732 aaPredicted RBP28.46■■■□□ 2.15
LTBP4-206ENST00000546155 ITSN1Q15811 1721 aa28.46■■■□□ 2.15
LTBP4-206ENST00000546155 BCL9LQ86UU0 1499 aa28.45■■■□□ 2.14
LTBP4-206ENST00000546155 FAM83GA6ND36 823 aa28.44■■■□□ 2.14
LTBP4-206ENST00000546155 TOPAZ1Q8N9V7 1692 aa28.43■■■□□ 2.14
LTBP4-206ENST00000546155 UNC5CLQ8IV45 518 aa28.43■■■□□ 2.14
LTBP4-206ENST00000546155 ABTB2Q8N961 1025 aa28.43■■■□□ 2.14
LTBP4-206ENST00000546155 ATRNO75882 1429 aa28.42■■■□□ 2.14
LTBP4-206ENST00000546155 ST20-MTHFSA0A0A6YYL1 179 aa28.4■■■□□ 2.14
LTBP4-206ENST00000546155 ALS2Q96Q42 1657 aa28.39■■■□□ 2.14
LTBP4-206ENST00000546155 SLIT2O94813 1529 aa28.38■■■□□ 2.13
LTBP4-206ENST00000546155 RGS12O14924 1447 aa28.38■■■□□ 2.13
LTBP4-206ENST00000546155 ZC3H6P61129 1189 aaKnown RBP28.38■■■□□ 2.13
LTBP4-206ENST00000546155 CCDC9Q9Y3X0 531 aaKnown RBP28.38■■■□□ 2.13
LTBP4-206ENST00000546155 TMC1Q8TDI8 760 aa28.37■■■□□ 2.13
LTBP4-206ENST00000546155 GJD4Q96KN9 370 aaPredicted RBP28.37■■■□□ 2.13
LTBP4-206ENST00000546155 PRDM11Q9NQV5 511 aa28.36■■■□□ 2.13
LTBP4-206ENST00000546155 BTG4Q9NY30 223 aa28.36■■■□□ 2.13
LTBP4-206ENST00000546155 ATAD2Q6PL18 1390 aa28.36■■■□□ 2.13
LTBP4-206ENST00000546155 CHRNA2Q15822 529 aa28.35■■■□□ 2.13
LTBP4-206ENST00000546155 SBNO2Q9Y2G9 1366 aa28.35■■■□□ 2.13
LTBP4-206ENST00000546155 MARF1Q9Y4F3 1742 aaKnown RBP28.35■■■□□ 2.13
LTBP4-206ENST00000546155 CDK12Q9NYV4 1490 aaPredicted RBP28.34■■■□□ 2.13
LTBP4-206ENST00000546155 USP6P35125 1406 aa28.34■■■□□ 2.13
LTBP4-206ENST00000546155 NLRP13Q86W25 1043 aa28.33■■■□□ 2.13
LTBP4-206ENST00000546155 ABCA3Q99758 1704 aa28.32■■■□□ 2.12
LTBP4-206ENST00000546155 TESK2Q96S53 571 aa28.32■■■□□ 2.12
LTBP4-206ENST00000546155 NLRP6P59044 892 aa28.31■■■□□ 2.12
LTBP4-206ENST00000546155 KIAA0232Q92628 1395 aa28.31■■■□□ 2.12
LTBP4-206ENST00000546155 VPS72Q15906 364 aa28.3■■■□□ 2.12
LTBP4-206ENST00000546155 ZNF692Q9BU19 519 aaPredicted RBP28.3■■■□□ 2.12
LTBP4-206ENST00000546155 SLC12A5Q9H2X9 1139 aa28.3■■■□□ 2.12
LTBP4-206ENST00000546155 USP47Q96K76 1375 aa28.29■■■□□ 2.12
LTBP4-206ENST00000546155 ZBTB7CA1YPR0 619 aa28.29■■■□□ 2.12
LTBP4-206ENST00000546155 TTC21BQ7Z4L5 1316 aa28.28■■■□□ 2.12
LTBP4-206ENST00000546155 BRD4O60885 1362 aaPredicted RBP28.26■■■□□ 2.12
LTBP4-206ENST00000546155 KTN1Q86UP2 1357 aaKnown RBP28.26■■■□□ 2.12
LTBP4-206ENST00000546155 USP19O94966 1318 aa28.26■■■□□ 2.11
LTBP4-206ENST00000546155 GCP02774 474 aa28.26■■■□□ 2.11
LTBP4-206ENST00000546155 UPF1Q92900 1129 aaKnown RBP eCLIP28.26■■■□□ 2.11
LTBP4-206ENST00000546155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.25■■■□□ 2.11
LTBP4-206ENST00000546155 STRN4Q9NRL3 753 aa28.25■■■□□ 2.11
LTBP4-206ENST00000546155 SSH2Q76I76 1423 aa28.25■■■□□ 2.11
LTBP4-206ENST00000546155 SOX12O15370 315 aa28.23■■■□□ 2.11
LTBP4-206ENST00000546155 HDGFL2Q7Z4V5 671 aaPredicted RBP28.23■■■□□ 2.11
LTBP4-206ENST00000546155 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
LTBP4-206ENST00000546155 PLCH1Q4KWH8 1693 aa28.23■■■□□ 2.11
LTBP4-206ENST00000546155 A0A0G2JS52 829 aa28.22■■■□□ 2.11
LTBP4-206ENST00000546155 MYT1Q01538 1121 aa28.22■■■□□ 2.11
LTBP4-206ENST00000546155 CRYBG1Q9Y4K1 1723 aa28.21■■■□□ 2.11
LTBP4-206ENST00000546155 SEPT12Q8IYM1 358 aa28.21■■■□□ 2.11
LTBP4-206ENST00000546155 ZRANB1Q9UGI0 708 aa28.21■■■□□ 2.11
LTBP4-206ENST00000546155 GLI3P10071 1580 aa28.2■■■□□ 2.11
LTBP4-206ENST00000546155 COL14A1Q05707 1796 aaKnown RBP28.19■■■□□ 2.1
LTBP4-206ENST00000546155 PHRF1Q9P1Y6 1649 aaKnown RBP28.19■■■□□ 2.1
LTBP4-206ENST00000546155 EVA1CP58658 441 aa28.19■■■□□ 2.1
LTBP4-206ENST00000546155 TMF1P82094 1093 aa28.19■■■□□ 2.1
LTBP4-206ENST00000546155 FAM98CQ17RN3 349 aaKnown RBP28.19■■■□□ 2.1
LTBP4-206ENST00000546155 PUS7Q96PZ0 661 aaKnown RBP28.19■■■□□ 2.1
LTBP4-206ENST00000546155 TTC21AQ8NDW8 1320 aa28.18■■■□□ 2.1
LTBP4-206ENST00000546155 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.18■■■□□ 2.1
LTBP4-206ENST00000546155 TERF2IPQ9NYB0 399 aa28.18■■■□□ 2.1
LTBP4-206ENST00000546155 SLC24A1O60721 1099 aa28.17■■■□□ 2.1
LTBP4-206ENST00000546155 CD163L1Q9NR16 1453 aa28.16■■■□□ 2.1
LTBP4-206ENST00000546155 NME9Q86XW9 330 aa28.16■■■□□ 2.1
LTBP4-206ENST00000546155 NRKQ7Z2Y5 1582 aa28.16■■■□□ 2.1
LTBP4-206ENST00000546155 NWD2Q9ULI1 1742 aa28.15■■■□□ 2.1
LTBP4-206ENST00000546155 SPATA31A5Q5VU36 1347 aa28.15■■■□□ 2.1
LTBP4-206ENST00000546155 SPATA31A7Q8IWB4 1347 aa28.15■■■□□ 2.1
LTBP4-206ENST00000546155 CPDO75976 1380 aa28.14■■■□□ 2.1
LTBP4-206ENST00000546155 USP35Q9P2H5 1018 aa28.14■■■□□ 2.1
LTBP4-206ENST00000546155 A0A1W2PP64 1363 aa28.13■■■□□ 2.09
LTBP4-206ENST00000546155 PIK3C2AO00443 1686 aa28.11■■■□□ 2.09
LTBP4-206ENST00000546155 ONECUT3O60422 494 aaPredicted RBP28.11■■■□□ 2.09
LTBP4-206ENST00000546155 LARP1Q6PKG0 1096 aaKnown RBP28.11■■■□□ 2.09
LTBP4-206ENST00000546155 NRAPQ86VF7 1730 aa28.11■■■□□ 2.09
LTBP4-206ENST00000546155 AKAP12Q02952 1782 aa28.1■■■□□ 2.09
LTBP4-206ENST00000546155 KCNH5Q8NCM2 988 aa28.09■■■□□ 2.09
LTBP4-206ENST00000546155 CAMTA1Q9Y6Y1 1673 aa28.08■■■□□ 2.09
LTBP4-206ENST00000546155 POLR3GLQ9BT43 218 aa28.08■■■□□ 2.09
LTBP4-206ENST00000546155 SPATA31A1Q5TZJ5 1347 aa28.08■■■□□ 2.09
LTBP4-206ENST00000546155 SLIT3O75094 1523 aa28.08■■■□□ 2.08
LTBP4-206ENST00000546155 CDCA8Q53HL2 280 aa28.06■■■□□ 2.08
LTBP4-206ENST00000546155 KRT27Q7Z3Y8 459 aa28.06■■■□□ 2.08
LTBP4-206ENST00000546155 EDC4Q6P2E9 1401 aaKnown RBP28.06■■■□□ 2.08
LTBP4-206ENST00000546155 HSPA5P11021 654 aaKnown RBP28.05■■■□□ 2.08
LTBP4-206ENST00000546155 ARHGEF25Q86VW2 580 aa28.05■■■□□ 2.08
LTBP4-206ENST00000546155 NINLQ9Y2I6 1382 aa28.05■■■□□ 2.08
LTBP4-206ENST00000546155 AXIN2Q9Y2T1 843 aa28.05■■■□□ 2.08
LTBP4-206ENST00000546155 AATKQ6ZMQ8 1374 aa28.03■■■□□ 2.08
LTBP4-206ENST00000546155 EIF4G2P78344 907 aaKnown RBP eCLIP28.03■■■□□ 2.08
LTBP4-206ENST00000546155 MON2Q7Z3U7 1717 aa28.03■■■□□ 2.08
LTBP4-206ENST00000546155 USP31Q70CQ4 1352 aa28.02■■■□□ 2.08
LTBP4-206ENST00000546155 FAM182BQ5T319 152 aa28.02■■■□□ 2.08
LTBP4-206ENST00000546155 ANKRD36BQ8N2N9 1353 aa27.99■■■□□ 2.07
LTBP4-206ENST00000546155 TCP11L2Q8N4U5 519 aa27.99■■■□□ 2.07
LTBP4-206ENST00000546155 COL5A2P05997 1499 aaPredicted RBP27.99■■■□□ 2.07
LTBP4-206ENST00000546155 LMO7Q8WWI1 1683 aa27.98■■■□□ 2.07
LTBP4-206ENST00000546155 CSB-PGBD3P0DP91 1061 aa27.98■■■□□ 2.07
LTBP4-206ENST00000546155 TOM1L2Q6ZVM7 507 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms