RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 ARMC2Q8NEN0 867 aa11.33□□□□□ -0.6
COPA-206ENST00000545266 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
COPA-206ENST00000545266 GPKOWQ92917 476 aaPredicted RBP eCLIP11.32□□□□□ -0.6
COPA-206ENST00000545266 CTHP32929 405 aa11.31□□□□□ -0.6
COPA-206ENST00000545266 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
COPA-206ENST00000545266 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
COPA-206ENST00000545266 ABL2P42684 1182 aa11.29□□□□□ -0.6
COPA-206ENST00000545266 GPSM3Q9Y4H4 160 aa11.29□□□□□ -0.6
COPA-206ENST00000545266 WASHC4Q2M389 1173 aa11.28□□□□□ -0.6
COPA-206ENST00000545266 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
COPA-206ENST00000545266 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
COPA-206ENST00000545266 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
COPA-206ENST00000545266 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
COPA-206ENST00000545266 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
COPA-206ENST00000545266 RPIAP49247 311 aa11.25□□□□□ -0.61
COPA-206ENST00000545266 NBPF14Q5TI25 921 aa11.25□□□□□ -0.61
COPA-206ENST00000545266 ZNF330Q9Y3S2 320 aaPredicted RBP11.25□□□□□ -0.61
COPA-206ENST00000545266 A0A0G2JS52 829 aa11.24□□□□□ -0.61
COPA-206ENST00000545266 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
COPA-206ENST00000545266 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
COPA-206ENST00000545266 OCSTAMPQ9BR26 566 aa11.24□□□□□ -0.61
COPA-206ENST00000545266 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
COPA-206ENST00000545266 NR1H3Q13133 447 aa11.23□□□□□ -0.61
COPA-206ENST00000545266 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
COPA-206ENST00000545266 BAP1Q92560 729 aa11.22□□□□□ -0.61
COPA-206ENST00000545266 FBXO45P0C2W1 286 aa11.21□□□□□ -0.61
COPA-206ENST00000545266 PTK2Q05397 1052 aa11.21□□□□□ -0.61
COPA-206ENST00000545266 ZNF511Q8NB15 262 aa11.21□□□□□ -0.61
COPA-206ENST00000545266 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
COPA-206ENST00000545266 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
COPA-206ENST00000545266 TRIM32Q13049 653 aa11.2□□□□□ -0.62
COPA-206ENST00000545266 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
COPA-206ENST00000545266 POM121CA8CG34 1229 aa11.19□□□□□ -0.62
COPA-206ENST00000545266 ALG2Q9H553 416 aa11.19□□□□□ -0.62
COPA-206ENST00000545266 PLSCR2Q9NRY7 297 aa11.19□□□□□ -0.62
COPA-206ENST00000545266 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
COPA-206ENST00000545266 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
COPA-206ENST00000545266 SOX11P35716 441 aa11.18□□□□□ -0.62
COPA-206ENST00000545266 WNT7BP56706 349 aa11.18□□□□□ -0.62
COPA-206ENST00000545266 SH3BP2P78314 561 aa11.18□□□□□ -0.62
COPA-206ENST00000545266 VAC14Q08AM6 782 aa11.18□□□□□ -0.62
COPA-206ENST00000545266 ADAMTS19Q8TE59 1207 aa11.17□□□□□ -0.62
COPA-206ENST00000545266 SKOR1P84550 965 aa11.16□□□□□ -0.62
COPA-206ENST00000545266 BPHLQ86WA6 291 aaPredicted RBP11.16□□□□□ -0.62
COPA-206ENST00000545266 C1QTNF2Q9BXJ5 285 aa11.16□□□□□ -0.62
COPA-206ENST00000545266 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
COPA-206ENST00000545266 MCCD1P59942 119 aaPredicted RBP11.15□□□□□ -0.62
COPA-206ENST00000545266 C4orf48Q5BLP8 95 aa11.15□□□□□ -0.62
COPA-206ENST00000545266 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
COPA-206ENST00000545266 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
COPA-206ENST00000545266 ARID3CA6NKF2 412 aa11.14□□□□□ -0.63
COPA-206ENST00000545266 SLC19A1P41440 591 aa11.14□□□□□ -0.63
COPA-206ENST00000545266 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
COPA-206ENST00000545266 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
COPA-206ENST00000545266 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
COPA-206ENST00000545266 ADAM32Q8TC27 787 aa11.13□□□□□ -0.63
COPA-206ENST00000545266 HDGFL1Q5TGJ6 251 aa11.12□□□□□ -0.63
COPA-206ENST00000545266 ZNF592Q92610 1267 aa11.12□□□□□ -0.63
COPA-206ENST00000545266 GLMNQ92990 594 aa11.12□□□□□ -0.63
COPA-206ENST00000545266 V9GY48 417 aaPredicted RBP11.12□□□□□ -0.63
COPA-206ENST00000545266 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
COPA-206ENST00000545266 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
COPA-206ENST00000545266 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
COPA-206ENST00000545266 ZBTB33Q86T24 672 aa11.09□□□□□ -0.63
COPA-206ENST00000545266 MPNDQ8N594 471 aa11.09□□□□□ -0.63
COPA-206ENST00000545266 SEMA3FQ13275 785 aa11.08□□□□□ -0.64
COPA-206ENST00000545266 CALR3Q96L12 384 aaKnown RBP11.08□□□□□ -0.64
COPA-206ENST00000545266 WNT7AO00755 349 aa11.07□□□□□ -0.64
COPA-206ENST00000545266 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
COPA-206ENST00000545266 ZNF598Q86UK7 904 aaKnown RBP11.07□□□□□ -0.64
COPA-206ENST00000545266 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
COPA-206ENST00000545266 SIAH2O43255 324 aa11.06□□□□□ -0.64
COPA-206ENST00000545266 RGS20O76081 388 aa11.06□□□□□ -0.64
COPA-206ENST00000545266 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
COPA-206ENST00000545266 MAGEB6P1A0A0J9YX57 407 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 AGERQ15109 404 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 PHTF2Q8N3S3 785 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 CCDC82Q8N4S0 544 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 CDK15Q96Q40 435 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 CHIC2Q9UKJ5 165 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 MAP4K5Q9Y4K4 846 aa11.05□□□□□ -0.64
COPA-206ENST00000545266 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
COPA-206ENST00000545266 FAM174AQ8TBP5 190 aa11.04□□□□□ -0.64
COPA-206ENST00000545266 CARD14Q9BXL6 1004 aa11.04□□□□□ -0.64
COPA-206ENST00000545266 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
COPA-206ENST00000545266 PCDHB9Q9Y5E1 797 aa11.04□□□□□ -0.64
COPA-206ENST00000545266 ESPNB1AK53 854 aa11.03□□□□□ -0.64
COPA-206ENST00000545266 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
COPA-206ENST00000545266 EHBP1Q8NDI1 1231 aa11.02□□□□□ -0.65
COPA-206ENST00000545266 PKD2L1Q9P0L9 805 aa11.02□□□□□ -0.65
COPA-206ENST00000545266 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
COPA-206ENST00000545266 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
COPA-206ENST00000545266 CCDC125Q86Z20 511 aa11□□□□□ -0.65
COPA-206ENST00000545266 CCDC97Q96F63 343 aaPredicted RBP11□□□□□ -0.65
COPA-206ENST00000545266 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
COPA-206ENST00000545266 PPP1R12CQ9BZL4 782 aa11□□□□□ -0.65
COPA-206ENST00000545266 NBPF20Q3BBV1 942 aa10.99□□□□□ -0.65
COPA-206ENST00000545266 SEPT12Q8IYM1 358 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms