RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
CHERP-202ENST00000544299 NCOA3Q9Y6Q9 1424 aa24.27■■□□□ 1.48
CHERP-202ENST00000544299 C14orf37Q86TY3 774 aa24.27■■□□□ 1.48
CHERP-202ENST00000544299 MTHFSP49914 203 aa24.26■■□□□ 1.47
CHERP-202ENST00000544299 XIRP1Q702N8 1843 aaKnown RBP24.26■■□□□ 1.47
CHERP-202ENST00000544299 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
CHERP-202ENST00000544299 NGDNQ8NEJ9 315 aaKnown RBP24.25■■□□□ 1.47
CHERP-202ENST00000544299 ADAMTS8Q9UP79 889 aa24.24■■□□□ 1.47
CHERP-202ENST00000544299 OVOS2A0A0J9YW53 1432 aa24.24■■□□□ 1.47
CHERP-202ENST00000544299 OVOS2Q6IE36 1432 aa24.24■■□□□ 1.47
CHERP-202ENST00000544299 COL3A1P02461 1466 aaPredicted RBP24.24■■□□□ 1.47
CHERP-202ENST00000544299 C19orf44Q9H6X5 657 aa24.23■■□□□ 1.47
CHERP-202ENST00000544299 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
CHERP-202ENST00000544299 PIK3C2AO00443 1686 aa24.22■■□□□ 1.47
CHERP-202ENST00000544299 DCCP43146 1447 aa24.22■■□□□ 1.47
CHERP-202ENST00000544299 WDR43Q15061 677 aaKnown RBP eCLIP24.21■■□□□ 1.47
CHERP-202ENST00000544299 TTC21AQ8NDW8 1320 aa24.21■■□□□ 1.47
CHERP-202ENST00000544299 C1orf167Q5SNV9 1468 aa24.2■■□□□ 1.46
CHERP-202ENST00000544299 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.46
CHERP-202ENST00000544299 COG3Q96JB2 828 aa24.19■■□□□ 1.46
CHERP-202ENST00000544299 ZNF335Q9H4Z2 1342 aaPredicted RBP24.19■■□□□ 1.46
CHERP-202ENST00000544299 AATKQ6ZMQ8 1374 aa24.19■■□□□ 1.46
CHERP-202ENST00000544299 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
CHERP-202ENST00000544299 USP54Q70EL1 1684 aa24.19■■□□□ 1.46
CHERP-202ENST00000544299 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
CHERP-202ENST00000544299 MST1RQ04912 1400 aa24.18■■□□□ 1.46
CHERP-202ENST00000544299 FBLN1P23142 703 aa24.18■■□□□ 1.46
CHERP-202ENST00000544299 MARF1Q9Y4F3 1742 aaKnown RBP24.18■■□□□ 1.46
CHERP-202ENST00000544299 USP31Q70CQ4 1352 aa24.17■■□□□ 1.46
CHERP-202ENST00000544299 PNPLA6Q8IY17 1366 aa24.17■■□□□ 1.46
CHERP-202ENST00000544299 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
CHERP-202ENST00000544299 CFAP53Q96M91 514 aa24.17■■□□□ 1.46
CHERP-202ENST00000544299 SENP3-EIF4A1A0A087X0R7 540 aa24.16■■□□□ 1.46
CHERP-202ENST00000544299 ESCO1Q5FWF5 840 aa24.16■■□□□ 1.46
CHERP-202ENST00000544299 POLKQ9UBT6 870 aa24.16■■□□□ 1.46
CHERP-202ENST00000544299 KIF1AQ12756 1690 aa24.16■■□□□ 1.46
CHERP-202ENST00000544299 ORAI2Q96SN7 254 aa24.16■■□□□ 1.46
CHERP-202ENST00000544299 CDK12Q9NYV4 1490 aaPredicted RBP24.12■■□□□ 1.45
CHERP-202ENST00000544299 EMILIN1Q9Y6C2 1016 aa24.11■■□□□ 1.45
CHERP-202ENST00000544299 ATF3P18847 181 aa24.11■■□□□ 1.45
CHERP-202ENST00000544299 MSH6P52701 1360 aa24.11■■□□□ 1.45
CHERP-202ENST00000544299 TRPM3Q9HCF6 1732 aaPredicted RBP24.1■■□□□ 1.45
CHERP-202ENST00000544299 DMRT2Q9Y5R5 561 aa24.1■■□□□ 1.45
CHERP-202ENST00000544299 PEAK1Q9H792 1746 aa24.08■■□□□ 1.45
CHERP-202ENST00000544299 CADPS2Q86UW7 1296 aa24.08■■□□□ 1.44
CHERP-202ENST00000544299 CCDC146Q8IYE0 955 aa24.08■■□□□ 1.44
CHERP-202ENST00000544299 RRS1Q15050 365 aaKnown RBP24.07■■□□□ 1.44
CHERP-202ENST00000544299 FOXO3O43524 673 aa24.05■■□□□ 1.44
CHERP-202ENST00000544299 PSME1Q06323 249 aa24.05■■□□□ 1.44
CHERP-202ENST00000544299 IQSEC2Q5JU85 1478 aa24.04■■□□□ 1.44
CHERP-202ENST00000544299 PPM1GO15355 546 aaPredicted RBP24.03■■□□□ 1.44
CHERP-202ENST00000544299 DIAPH1O60610 1272 aaKnown RBP24.03■■□□□ 1.44
CHERP-202ENST00000544299 NLRP6P59044 892 aa24.03■■□□□ 1.44
CHERP-202ENST00000544299 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
CHERP-202ENST00000544299 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
CHERP-202ENST00000544299 SUPT16HQ9Y5B9 1047 aaKnown RBP24.03■■□□□ 1.44
CHERP-202ENST00000544299 NUTM2GQ5VZR2 741 aa24.02■■□□□ 1.44
CHERP-202ENST00000544299 ABTB2Q8N961 1025 aa24.02■■□□□ 1.44
CHERP-202ENST00000544299 U2AF1L5P0DN76 240 aaPredicted RBP24.01■■□□□ 1.43
CHERP-202ENST00000544299 U2AF1Q01081 240 aaKnown RBP eCLIP24.01■■□□□ 1.43
CHERP-202ENST00000544299 XPCQ01831 940 aaPredicted RBP24.01■■□□□ 1.43
CHERP-202ENST00000544299 NUDCQ9Y266 331 aa24.01■■□□□ 1.43
CHERP-202ENST00000544299 APAF1O14727 1248 aa24■■□□□ 1.43
CHERP-202ENST00000544299 ALS2Q96Q42 1657 aa24■■□□□ 1.43
CHERP-202ENST00000544299 MAP3K19Q56UN5 1328 aa23.99■■□□□ 1.43
CHERP-202ENST00000544299 NEFLP07196 543 aa23.99■■□□□ 1.43
CHERP-202ENST00000544299 IL13P35225 146 aa23.99■■□□□ 1.43
CHERP-202ENST00000544299 RUNDC1Q96C34 613 aa23.99■■□□□ 1.43
CHERP-202ENST00000544299 NFAT5O94916 1531 aa23.99■■□□□ 1.43
CHERP-202ENST00000544299 ZNF521Q96K83 1311 aa23.98■■□□□ 1.43
CHERP-202ENST00000544299 U2SURPO15042 1029 aaKnown RBP23.98■■□□□ 1.43
CHERP-202ENST00000544299 KRT28Q7Z3Y7 464 aa23.98■■□□□ 1.43
CHERP-202ENST00000544299 SOX12O15370 315 aa23.97■■□□□ 1.43
CHERP-202ENST00000544299 LTBP4Q8N2S1 1624 aa23.96■■□□□ 1.43
CHERP-202ENST00000544299 SLIT3O75094 1523 aa23.96■■□□□ 1.43
CHERP-202ENST00000544299 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
CHERP-202ENST00000544299 PXDNQ92626 1479 aa23.95■■□□□ 1.43
CHERP-202ENST00000544299 SBNO1A3KN83 1393 aa23.95■■□□□ 1.42
CHERP-202ENST00000544299 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
CHERP-202ENST00000544299 DDX17Q92841 729 aaKnown RBP23.95■■□□□ 1.42
CHERP-202ENST00000544299 RGPD1P0DJD0 1748 aa23.94■■□□□ 1.42
CHERP-202ENST00000544299 AEBP2Q6ZN18 517 aaPredicted RBP23.93■■□□□ 1.42
CHERP-202ENST00000544299 BRINP3Q76B58 766 aa23.93■■□□□ 1.42
CHERP-202ENST00000544299 FLT4P35916 1363 aa23.93■■□□□ 1.42
CHERP-202ENST00000544299 USP19O94966 1318 aa23.92■■□□□ 1.42
CHERP-202ENST00000544299 LTN1O94822 1766 aa23.92■■□□□ 1.42
CHERP-202ENST00000544299 EIF4A2Q14240 407 aaKnown RBP23.92■■□□□ 1.42
CHERP-202ENST00000544299 TCP11L2Q8N4U5 519 aa23.92■■□□□ 1.42
CHERP-202ENST00000544299 CDCA7LQ96GN5 454 aa23.92■■□□□ 1.42
CHERP-202ENST00000544299 NPHP3Q7Z494 1330 aa23.92■■□□□ 1.42
CHERP-202ENST00000544299 HSP90AB2PQ58FF8 381 aa23.91■■□□□ 1.42
CHERP-202ENST00000544299 NGEFQ8N5V2 710 aa23.91■■□□□ 1.42
CHERP-202ENST00000544299 SLAIN2Q9P270 581 aa23.91■■□□□ 1.42
CHERP-202ENST00000544299 RSPH6AQ9H0K4 717 aa23.91■■□□□ 1.42
CHERP-202ENST00000544299 KIF24Q5T7B8 1368 aa23.91■■□□□ 1.42
CHERP-202ENST00000544299 PHRF1Q9P1Y6 1649 aaKnown RBP23.9■■□□□ 1.42
CHERP-202ENST00000544299 MED1Q15648 1581 aaPredicted RBP23.89■■□□□ 1.42
CHERP-202ENST00000544299 PHF23Q9BUL5 403 aaPredicted RBP23.89■■□□□ 1.42
CHERP-202ENST00000544299 FCHSD2O94868 740 aa23.88■■□□□ 1.41
CHERP-202ENST00000544299 RRP7AQ9Y3A4 280 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms