RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 NINLQ9Y2I6 1382 aa18.33■□□□□ 0.53
ITM2C-209ENST00000543957 SPATA31A1Q5TZJ5 1347 aa18.32■□□□□ 0.52
ITM2C-209ENST00000543957 KCNQ2O43526 872 aa18.32■□□□□ 0.52
ITM2C-209ENST00000543957 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
ITM2C-209ENST00000543957 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
ITM2C-209ENST00000543957 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
ITM2C-209ENST00000543957 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
ITM2C-209ENST00000543957 PRAM1Q96QH2 718 aa18.28■□□□□ 0.52
ITM2C-209ENST00000543957 SPATA31E1Q6ZUB1 1445 aa18.28■□□□□ 0.52
ITM2C-209ENST00000543957 ANKARQ7Z5J8 1434 aa18.28■□□□□ 0.52
ITM2C-209ENST00000543957 RREB1Q92766 1687 aa18.28■□□□□ 0.52
ITM2C-209ENST00000543957 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.52
ITM2C-209ENST00000543957 PDE3BQ13370 1112 aa18.27■□□□□ 0.52
ITM2C-209ENST00000543957 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
ITM2C-209ENST00000543957 STRN4Q9NRL3 753 aa18.27■□□□□ 0.52
ITM2C-209ENST00000543957 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
ITM2C-209ENST00000543957 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
ITM2C-209ENST00000543957 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
ITM2C-209ENST00000543957 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
ITM2C-209ENST00000543957 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
ITM2C-209ENST00000543957 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
ITM2C-209ENST00000543957 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
ITM2C-209ENST00000543957 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
ITM2C-209ENST00000543957 CHRNA2Q15822 529 aa18.24■□□□□ 0.51
ITM2C-209ENST00000543957 POGKQ9P215 609 aa18.24■□□□□ 0.51
ITM2C-209ENST00000543957 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
ITM2C-209ENST00000543957 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
ITM2C-209ENST00000543957 IFFO2Q5TF58 517 aa18.23■□□□□ 0.51
ITM2C-209ENST00000543957 BARGINQ6ZT62 677 aa18.23■□□□□ 0.51
ITM2C-209ENST00000543957 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
ITM2C-209ENST00000543957 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
ITM2C-209ENST00000543957 EVA1CP58658 441 aa18.2■□□□□ 0.5
ITM2C-209ENST00000543957 NGDNQ8NEJ9 315 aaKnown RBP18.2■□□□□ 0.5
ITM2C-209ENST00000543957 HIRIP3Q9BW71 556 aaPredicted RBP18.19■□□□□ 0.5
ITM2C-209ENST00000543957 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
ITM2C-209ENST00000543957 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
ITM2C-209ENST00000543957 C1QTNF8P60827 252 aa18.18■□□□□ 0.5
ITM2C-209ENST00000543957 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
ITM2C-209ENST00000543957 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
ITM2C-209ENST00000543957 SSH2Q76I76 1423 aa18.16■□□□□ 0.5
ITM2C-209ENST00000543957 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
ITM2C-209ENST00000543957 UTRNP46939 3433 aa18.15■□□□□ 0.5
ITM2C-209ENST00000543957 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
ITM2C-209ENST00000543957 LARP1Q6PKG0 1096 aaKnown RBP18.15■□□□□ 0.5
ITM2C-209ENST00000543957 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
ITM2C-209ENST00000543957 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
ITM2C-209ENST00000543957 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
ITM2C-209ENST00000543957 WASLO00401 505 aaPredicted RBP18.13■□□□□ 0.49
ITM2C-209ENST00000543957 PLSCR1O15162 318 aa18.13■□□□□ 0.49
ITM2C-209ENST00000543957 ZBTB7AO95365 584 aa18.13■□□□□ 0.49
ITM2C-209ENST00000543957 PDGFDQ9GZP0 370 aaPredicted RBP18.13■□□□□ 0.49
ITM2C-209ENST00000543957 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
ITM2C-209ENST00000543957 TULP4Q9NRJ4 1543 aa18.13■□□□□ 0.49
ITM2C-209ENST00000543957 PTGER2P43116 358 aa18.12■□□□□ 0.49
ITM2C-209ENST00000543957 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
ITM2C-209ENST00000543957 TRAK1Q9UPV9 953 aa18.12■□□□□ 0.49
ITM2C-209ENST00000543957 THRAP3Q9Y2W1 955 aaKnown RBP18.12■□□□□ 0.49
ITM2C-209ENST00000543957 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
ITM2C-209ENST00000543957 SYT17Q9BSW7 474 aa18.1■□□□□ 0.49
ITM2C-209ENST00000543957 ATF5Q9Y2D1 282 aaPredicted RBP18.1■□□□□ 0.49
ITM2C-209ENST00000543957 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
ITM2C-209ENST00000543957 FHDC1Q9C0D6 1143 aaPredicted RBP18.09■□□□□ 0.49
ITM2C-209ENST00000543957 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
ITM2C-209ENST00000543957 PHRF1Q9P1Y6 1649 aaKnown RBP18.09■□□□□ 0.49
ITM2C-209ENST00000543957 ATP7BP35670 1465 aa18.07■□□□□ 0.48
ITM2C-209ENST00000543957 OVOS2A0A0G2JMS6 1433 aa18.07■□□□□ 0.48
ITM2C-209ENST00000543957 OVOS2A0A0J9YW53 1432 aa18.07■□□□□ 0.48
ITM2C-209ENST00000543957 OVOS2Q6IE36 1432 aa18.07■□□□□ 0.48
ITM2C-209ENST00000543957 MYOM1P52179 1685 aa18.07■□□□□ 0.48
ITM2C-209ENST00000543957 PROM2Q8N271 834 aa18.06■□□□□ 0.48
ITM2C-209ENST00000543957 RGPD3A6NKT7 1758 aaPredicted RBP18.05■□□□□ 0.48
ITM2C-209ENST00000543957 RGPD4Q7Z3J3 1758 aa18.05■□□□□ 0.48
ITM2C-209ENST00000543957 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
ITM2C-209ENST00000543957 CPDO75976 1380 aa18.04■□□□□ 0.48
ITM2C-209ENST00000543957 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
ITM2C-209ENST00000543957 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
ITM2C-209ENST00000543957 CHD4Q14839 1912 aa18.04■□□□□ 0.48
ITM2C-209ENST00000543957 PARP4Q9UKK3 1724 aaKnown RBP18.03■□□□□ 0.48
ITM2C-209ENST00000543957 PEAK1Q9H792 1746 aa18.03■□□□□ 0.48
ITM2C-209ENST00000543957 LMO7Q8WWI1 1683 aa18.03■□□□□ 0.48
ITM2C-209ENST00000543957 DDB1Q16531 1140 aa18.02■□□□□ 0.48
ITM2C-209ENST00000543957 ABTB2Q8N961 1025 aa18.02■□□□□ 0.48
ITM2C-209ENST00000543957 STK32BQ9NY57 414 aa18.02■□□□□ 0.48
ITM2C-209ENST00000543957 MTFR1LQ9H019 292 aa18.01■□□□□ 0.47
ITM2C-209ENST00000543957 COL5A2P05997 1499 aaPredicted RBP18.01■□□□□ 0.47
ITM2C-209ENST00000543957 CRB1P82279 1406 aa18■□□□□ 0.47
ITM2C-209ENST00000543957 GIGYF1O75420 1035 aaPredicted RBP18■□□□□ 0.47
ITM2C-209ENST00000543957 SLC15A2Q16348 729 aa18■□□□□ 0.47
ITM2C-209ENST00000543957 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
ITM2C-209ENST00000543957 USP19O94966 1318 aa17.99■□□□□ 0.47
ITM2C-209ENST00000543957 ACEP12821 1306 aa17.99■□□□□ 0.47
ITM2C-209ENST00000543957 ITSN1Q15811 1721 aa17.99■□□□□ 0.47
ITM2C-209ENST00000543957 GCP02774 474 aa17.99■□□□□ 0.47
ITM2C-209ENST00000543957 TXNRD1Q16881 649 aa17.99■□□□□ 0.47
ITM2C-209ENST00000543957 SBF2Q86WG5 1849 aa17.99■□□□□ 0.47
ITM2C-209ENST00000543957 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
ITM2C-209ENST00000543957 NLRP13Q86W25 1043 aa17.97■□□□□ 0.47
ITM2C-209ENST00000543957 ARXQ96QS3 562 aa17.97■□□□□ 0.47
ITM2C-209ENST00000543957 CDK19Q9BWU1 502 aa17.96■□□□□ 0.47
ITM2C-209ENST00000543957 CCDC61Q9Y6R9 512 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms