RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 A0A1W2PP64 1363 aa18.89■□□□□ 0.61
SP140-213ENST00000543928 KTN1Q86UP2 1357 aaKnown RBP18.89■□□□□ 0.61
SP140-213ENST00000543928 CCDC7Q96M83 1385 aa18.89■□□□□ 0.61
SP140-213ENST00000543928 JCADQ9P266 1359 aa18.89■□□□□ 0.61
SP140-213ENST00000543928 TNS3Q68CZ2 1445 aa18.89■□□□□ 0.61
SP140-213ENST00000543928 WASHC2AQ641Q2 1341 aa18.88■□□□□ 0.61
SP140-213ENST00000543928 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
SP140-213ENST00000543928 MON2Q7Z3U7 1717 aa18.87■□□□□ 0.61
SP140-213ENST00000543928 ANKRD36BQ8N2N9 1353 aa18.87■□□□□ 0.61
SP140-213ENST00000543928 SSH2Q76I76 1423 aa18.86■□□□□ 0.61
SP140-213ENST00000543928 BRD4O60885 1362 aaPredicted RBP18.86■□□□□ 0.61
SP140-213ENST00000543928 PNPLA6Q8IY17 1366 aa18.86■□□□□ 0.61
SP140-213ENST00000543928 ARHGEF10O15013 1369 aa18.84■□□□□ 0.61
SP140-213ENST00000543928 TTC21BQ7Z4L5 1316 aa18.84■□□□□ 0.61
SP140-213ENST00000543928 SHPRHQ149N8 1683 aa18.84■□□□□ 0.61
SP140-213ENST00000543928 ALS2Q96Q42 1657 aa18.84■□□□□ 0.61
SP140-213ENST00000543928 NRKQ7Z2Y5 1582 aa18.84■□□□□ 0.61
SP140-213ENST00000543928 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.6
SP140-213ENST00000543928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.82■□□□□ 0.6
SP140-213ENST00000543928 ABTB2Q8N961 1025 aa18.82■□□□□ 0.6
SP140-213ENST00000543928 TTC21AQ8NDW8 1320 aa18.81■□□□□ 0.6
SP140-213ENST00000543928 PLEKHG5O94827 1062 aa18.81■□□□□ 0.6
SP140-213ENST00000543928 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
SP140-213ENST00000543928 PANK3Q9H999 370 aa18.81■□□□□ 0.6
SP140-213ENST00000543928 CARD14Q9BXL6 1004 aa18.8■□□□□ 0.6
SP140-213ENST00000543928 COL22A1Q8NFW1 1626 aaPredicted RBP18.8■□□□□ 0.6
SP140-213ENST00000543928 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
SP140-213ENST00000543928 NSD3Q9BZ95 1437 aa18.79■□□□□ 0.6
SP140-213ENST00000543928 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
SP140-213ENST00000543928 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
SP140-213ENST00000543928 NME9Q86XW9 330 aa18.78■□□□□ 0.6
SP140-213ENST00000543928 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
SP140-213ENST00000543928 CABLES1Q8TDN4 633 aa18.78■□□□□ 0.6
SP140-213ENST00000543928 PIK3C2AO00443 1686 aa18.78■□□□□ 0.6
SP140-213ENST00000543928 NLRP6P59044 892 aa18.77■□□□□ 0.6
SP140-213ENST00000543928 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
SP140-213ENST00000543928 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
SP140-213ENST00000543928 ZRANB1Q9UGI0 708 aa18.75■□□□□ 0.59
SP140-213ENST00000543928 LRP6O75581 1613 aa18.74■□□□□ 0.59
SP140-213ENST00000543928 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
SP140-213ENST00000543928 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
SP140-213ENST00000543928 USP19O94966 1318 aa18.74■□□□□ 0.59
SP140-213ENST00000543928 USP31Q70CQ4 1352 aa18.73■□□□□ 0.59
SP140-213ENST00000543928 ABCA3Q99758 1704 aa18.73■□□□□ 0.59
SP140-213ENST00000543928 CRYBG1Q9Y4K1 1723 aa18.73■□□□□ 0.59
SP140-213ENST00000543928 FYB1O15117 783 aa18.72■□□□□ 0.59
SP140-213ENST00000543928 ADAMTS2O95450 1211 aa18.72■□□□□ 0.59
SP140-213ENST00000543928 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
SP140-213ENST00000543928 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
SP140-213ENST00000543928 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.59
SP140-213ENST00000543928 KIF20BQ96Q89 1820 aa18.71■□□□□ 0.59
SP140-213ENST00000543928 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
SP140-213ENST00000543928 PHRF1Q9P1Y6 1649 aaKnown RBP18.71■□□□□ 0.58
SP140-213ENST00000543928 OVOS2A0A0J9YW53 1432 aa18.7■□□□□ 0.58
SP140-213ENST00000543928 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
SP140-213ENST00000543928 OVOS2Q6IE36 1432 aa18.7■□□□□ 0.58
SP140-213ENST00000543928 COG3Q96JB2 828 aa18.7■□□□□ 0.58
SP140-213ENST00000543928 USP54Q70EL1 1684 aa18.69■□□□□ 0.58
SP140-213ENST00000543928 SLIT3O75094 1523 aa18.69■□□□□ 0.58
SP140-213ENST00000543928 PER1O15534 1290 aaPredicted RBP18.69■□□□□ 0.58
SP140-213ENST00000543928 GCP02774 474 aa18.68■□□□□ 0.58
SP140-213ENST00000543928 SOX12O15370 315 aa18.67■□□□□ 0.58
SP140-213ENST00000543928 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
SP140-213ENST00000543928 ZC3H6P61129 1189 aaKnown RBP18.66■□□□□ 0.58
SP140-213ENST00000543928 KCNH5Q8NCM2 988 aa18.66■□□□□ 0.58
SP140-213ENST00000543928 AMER1Q5JTC6 1135 aaPredicted RBP18.65■□□□□ 0.58
SP140-213ENST00000543928 C8orf37Q96NL8 207 aa18.65■□□□□ 0.58
SP140-213ENST00000543928 PRDM11Q9NQV5 511 aa18.64■□□□□ 0.57
SP140-213ENST00000543928 NSD2O96028 1365 aa18.64■□□□□ 0.57
SP140-213ENST00000543928 KIAA0232Q92628 1395 aa18.64■□□□□ 0.57
SP140-213ENST00000543928 NFAT5O94916 1531 aa18.64■□□□□ 0.57
SP140-213ENST00000543928 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
SP140-213ENST00000543928 CPDO75976 1380 aa18.63■□□□□ 0.57
SP140-213ENST00000543928 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
SP140-213ENST00000543928 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
SP140-213ENST00000543928 ANKRD26Q9UPS8 1709 aa18.62■□□□□ 0.57
SP140-213ENST00000543928 CHRNA2Q15822 529 aa18.61■□□□□ 0.57
SP140-213ENST00000543928 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
SP140-213ENST00000543928 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
SP140-213ENST00000543928 FBLN1P23142 703 aa18.6■□□□□ 0.57
SP140-213ENST00000543928 CNGB1Q14028 1251 aaPredicted RBP18.6■□□□□ 0.57
SP140-213ENST00000543928 ARHGEF25Q86VW2 580 aa18.6■□□□□ 0.57
SP140-213ENST00000543928 AFF2P51816 1311 aa18.59■□□□□ 0.57
SP140-213ENST00000543928 MORC1Q86VD1 984 aa18.59■□□□□ 0.57
SP140-213ENST00000543928 COL14A1Q05707 1796 aaKnown RBP18.59■□□□□ 0.57
SP140-213ENST00000543928 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
SP140-213ENST00000543928 FNBP4Q8N3X1 1017 aaPredicted RBP18.58■□□□□ 0.56
SP140-213ENST00000543928 PLCH1Q4KWH8 1693 aa18.57■□□□□ 0.56
SP140-213ENST00000543928 SLIT2O94813 1529 aa18.57■□□□□ 0.56
SP140-213ENST00000543928 LTN1O94822 1766 aa18.57■□□□□ 0.56
SP140-213ENST00000543928 AATKQ6ZMQ8 1374 aa18.56■□□□□ 0.56
SP140-213ENST00000543928 RRS1Q15050 365 aaKnown RBP18.56■□□□□ 0.56
SP140-213ENST00000543928 BTG4Q9NY30 223 aa18.56■□□□□ 0.56
SP140-213ENST00000543928 USP21Q9UK80 565 aa18.56■□□□□ 0.56
SP140-213ENST00000543928 MAP3K19Q56UN5 1328 aa18.55■□□□□ 0.56
SP140-213ENST00000543928 LMO7Q8WWI1 1683 aa18.54■□□□□ 0.56
SP140-213ENST00000543928 BCL9LQ86UU0 1499 aa18.54■□□□□ 0.56
SP140-213ENST00000543928 COL18A1P39060 1754 aa18.54■□□□□ 0.56
SP140-213ENST00000543928 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
SP140-213ENST00000543928 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms