RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 KIF16BQ96L93 1317 aa15.61■□□□□ 0.09
SMG8-202ENST00000543872 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
SMG8-202ENST00000543872 ZNF830Q96NB3 372 aaPredicted RBP15.61■□□□□ 0.09
SMG8-202ENST00000543872 CROCC2H7BZ55 1655 aa15.61■□□□□ 0.09
SMG8-202ENST00000543872 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
SMG8-202ENST00000543872 IGSF3O75054 1194 aa15.6■□□□□ 0.09
SMG8-202ENST00000543872 NUCB2P80303 420 aa15.6■□□□□ 0.09
SMG8-202ENST00000543872 ADCY10Q96PN6 1610 aa15.6■□□□□ 0.09
SMG8-202ENST00000543872 GPT2Q8TD30 523 aa15.6■□□□□ 0.09
SMG8-202ENST00000543872 IBTKQ9P2D0 1353 aaPredicted RBP15.6■□□□□ 0.09
SMG8-202ENST00000543872 NPC1L1Q9UHC9 1359 aa15.6■□□□□ 0.09
SMG8-202ENST00000543872 BMP2KLQ5H9B9 411 aa15.59■□□□□ 0.09
SMG8-202ENST00000543872 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
SMG8-202ENST00000543872 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
SMG8-202ENST00000543872 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
SMG8-202ENST00000543872 KIAA2012Q0VF49 1180 aa15.58■□□□□ 0.09
SMG8-202ENST00000543872 TMEM63CQ9P1W3 806 aa15.58■□□□□ 0.09
SMG8-202ENST00000543872 NSFL1CQ9UNZ2 370 aaKnown RBP15.58■□□□□ 0.09
SMG8-202ENST00000543872 U2SURPO15042 1029 aaKnown RBP15.58■□□□□ 0.08
SMG8-202ENST00000543872 FOXD4L6Q3SYB3 417 aaPredicted RBP15.58■□□□□ 0.08
SMG8-202ENST00000543872 FOXD4L3Q6VB84 417 aaPredicted RBP15.58■□□□□ 0.08
SMG8-202ENST00000543872 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
SMG8-202ENST00000543872 ABCC10Q5T3U5 1492 aa15.58■□□□□ 0.08
SMG8-202ENST00000543872 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
SMG8-202ENST00000543872 ZGPATQ8N5A5 531 aaKnown RBP15.58■□□□□ 0.08
SMG8-202ENST00000543872 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
SMG8-202ENST00000543872 POLR3AO14802 1390 aaPredicted RBP15.57■□□□□ 0.08
SMG8-202ENST00000543872 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
SMG8-202ENST00000543872 MCM5P33992 734 aa15.57■□□□□ 0.08
SMG8-202ENST00000543872 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
SMG8-202ENST00000543872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMG8-202ENST00000543872 NUP160Q12769 1436 aa15.57■□□□□ 0.08
SMG8-202ENST00000543872 LRSAM1Q6UWE0 723 aa15.56■□□□□ 0.08
SMG8-202ENST00000543872 SHANK2Q9UPX8 1470 aa15.56■□□□□ 0.08
SMG8-202ENST00000543872 CLEC17AQ6ZS10 378 aa15.56■□□□□ 0.08
SMG8-202ENST00000543872 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
SMG8-202ENST00000543872 MYRIPQ8NFW9 859 aa15.55■□□□□ 0.08
SMG8-202ENST00000543872 PLXNC1O60486 1568 aa15.55■□□□□ 0.08
SMG8-202ENST00000543872 ATP2B3Q16720 1220 aa15.55■□□□□ 0.08
SMG8-202ENST00000543872 SCAF11Q99590 1463 aaKnown RBP15.54■□□□□ 0.08
SMG8-202ENST00000543872 EIF2AK4Q9P2K8 1649 aaKnown RBP15.54■□□□□ 0.08
SMG8-202ENST00000543872 ZBTB22O15209 634 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 IPO8O15397 1037 aaKnown RBP15.53■□□□□ 0.08
SMG8-202ENST00000543872 ZNF710Q8N1W2 664 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 SYNMO15061 1565 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 PLCB2Q00722 1185 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 SCAPERQ9BY12 1400 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 CDC42BPAQ5VT25 1732 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 CDC45O75419 566 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
SMG8-202ENST00000543872 RABEP1Q15276 862 aa15.53■□□□□ 0.08
SMG8-202ENST00000543872 LAMC1P11047 1609 aa15.52■□□□□ 0.08
SMG8-202ENST00000543872 TTC12Q9H892 705 aaPredicted RBP15.52■□□□□ 0.07
SMG8-202ENST00000543872 CCDC27Q2M243 656 aa15.51■□□□□ 0.07
SMG8-202ENST00000543872 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
SMG8-202ENST00000543872 NSD3Q9BZ95 1437 aa15.5■□□□□ 0.07
SMG8-202ENST00000543872 APBB1O00213 710 aa15.5■□□□□ 0.07
SMG8-202ENST00000543872 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
SMG8-202ENST00000543872 NOLC1Q14978 699 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMG8-202ENST00000543872 NOL8Q76FK4 1167 aaKnown RBP15.5■□□□□ 0.07
SMG8-202ENST00000543872 TSPY26PQ9H489 355 aa15.5■□□□□ 0.07
SMG8-202ENST00000543872 KIF3AQ9Y496 699 aa15.5■□□□□ 0.07
SMG8-202ENST00000543872 MAGI1Q96QZ7 1491 aaPredicted RBP15.5■□□□□ 0.07
SMG8-202ENST00000543872 ZDHHC9Q9Y397 364 aa15.49■□□□□ 0.07
SMG8-202ENST00000543872 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
SMG8-202ENST00000543872 GTPBP4Q9BZE4 634 aaKnown RBP15.49■□□□□ 0.07
SMG8-202ENST00000543872 ELL2O00472 640 aaPredicted RBP15.49■□□□□ 0.07
SMG8-202ENST00000543872 CYP2E1P05181 493 aaPredicted RBP15.49■□□□□ 0.07
SMG8-202ENST00000543872 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
SMG8-202ENST00000543872 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
SMG8-202ENST00000543872 MYO5CQ9NQX4 1742 aa15.48■□□□□ 0.07
SMG8-202ENST00000543872 KIF20AO95235 890 aa15.48■□□□□ 0.07
SMG8-202ENST00000543872 RSPH4AQ5TD94 716 aa15.48■□□□□ 0.07
SMG8-202ENST00000543872 USP25Q9UHP3 1055 aa15.48■□□□□ 0.07
SMG8-202ENST00000543872 HMGN5P82970 282 aaKnown RBP15.48■□□□□ 0.07
SMG8-202ENST00000543872 GRIN2AQ12879 1464 aa15.47■□□□□ 0.07
SMG8-202ENST00000543872 ST18O60284 1047 aa15.47■□□□□ 0.07
SMG8-202ENST00000543872 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
SMG8-202ENST00000543872 PDCL2Q8N4E4 241 aa15.47■□□□□ 0.07
SMG8-202ENST00000543872 GDPD2Q9HCC8 539 aa15.47■□□□□ 0.07
SMG8-202ENST00000543872 TRAK1Q9UPV9 953 aa15.47■□□□□ 0.07
SMG8-202ENST00000543872 CT47B1P0C2W7 299 aaPredicted RBP15.47■□□□□ 0.07
SMG8-202ENST00000543872 GCC1Q96CN9 775 aa15.47■□□□□ 0.07
SMG8-202ENST00000543872 CWC22Q9HCG8 908 aaKnown RBP15.47■□□□□ 0.07
SMG8-202ENST00000543872 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
SMG8-202ENST00000543872 C16orf71Q8IYS4 520 aaPredicted RBP15.47■□□□□ 0.07
SMG8-202ENST00000543872 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
SMG8-202ENST00000543872 U2AF2P26368 475 aaKnown RBP eCLIP15.46■□□□□ 0.07
SMG8-202ENST00000543872 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
SMG8-202ENST00000543872 PBRM1Q86U86 1689 aa15.46■□□□□ 0.07
SMG8-202ENST00000543872 GSPT1P15170 499 aaKnown RBP15.46■□□□□ 0.07
SMG8-202ENST00000543872 ZNF771Q7L3S4 317 aaPredicted RBP15.46■□□□□ 0.07
SMG8-202ENST00000543872 CGNQ9P2M7 1197 aaKnown RBP15.45■□□□□ 0.06
SMG8-202ENST00000543872 LETM1O95202 739 aaPredicted RBP15.45■□□□□ 0.06
SMG8-202ENST00000543872 CDK11BP21127 795 aaKnown RBP15.45■□□□□ 0.06
SMG8-202ENST00000543872 USP26Q9BXU7 913 aa15.45■□□□□ 0.06
SMG8-202ENST00000543872 TRIM35Q9UPQ4 493 aa15.45■□□□□ 0.06
SMG8-202ENST00000543872 MBD3O95983 291 aa15.44■□□□□ 0.06
SMG8-202ENST00000543872 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
SMG8-202ENST00000543872 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms