RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 MYT1Q01538 1121 aa10.22□□□□□ -0.77
NUP43-206ENST00000543637 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
NUP43-206ENST00000543637 ACEP12821 1306 aa10.22□□□□□ -0.77
NUP43-206ENST00000543637 SLIT2O94813 1529 aa10.22□□□□□ -0.77
NUP43-206ENST00000543637 PLCH1Q4KWH8 1693 aa10.22□□□□□ -0.77
NUP43-206ENST00000543637 ALS2Q96Q42 1657 aa10.22□□□□□ -0.77
NUP43-206ENST00000543637 ABCA3Q99758 1704 aa10.21□□□□□ -0.77
NUP43-206ENST00000543637 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
NUP43-206ENST00000543637 TRIM26Q12899 539 aaPredicted RBP10.21□□□□□ -0.77
NUP43-206ENST00000543637 SF3B2Q13435 895 aaKnown RBP10.21□□□□□ -0.77
NUP43-206ENST00000543637 VPS72Q15906 364 aa10.21□□□□□ -0.77
NUP43-206ENST00000543637 ABTB2Q8N961 1025 aa10.21□□□□□ -0.77
NUP43-206ENST00000543637 BTG4Q9NY30 223 aa10.21□□□□□ -0.77
NUP43-206ENST00000543637 QRICH2Q9H0J4 1663 aa10.21□□□□□ -0.78
NUP43-206ENST00000543637 COL14A1Q05707 1796 aaKnown RBP10.2□□□□□ -0.78
NUP43-206ENST00000543637 EVC2Q86UK5 1308 aa10.2□□□□□ -0.78
NUP43-206ENST00000543637 NLRP13Q86W25 1043 aa10.2□□□□□ -0.78
NUP43-206ENST00000543637 CABP2Q9NPB3 220 aa10.2□□□□□ -0.78
NUP43-206ENST00000543637 BRWD3Q6RI45 1802 aa10.19□□□□□ -0.78
NUP43-206ENST00000543637 TRPM1Q7Z4N2 1603 aa10.19□□□□□ -0.78
NUP43-206ENST00000543637 ROCK2O75116 1388 aaKnown RBP10.19□□□□□ -0.78
NUP43-206ENST00000543637 EVA1CP58658 441 aa10.19□□□□□ -0.78
NUP43-206ENST00000543637 NUTM2GQ5VZR2 741 aa10.19□□□□□ -0.78
NUP43-206ENST00000543637 SEPT12Q8IYM1 358 aa10.19□□□□□ -0.78
NUP43-206ENST00000543637 PRDM11Q9NQV5 511 aa10.19□□□□□ -0.78
NUP43-206ENST00000543637 ATP7BP35670 1465 aa10.18□□□□□ -0.78
NUP43-206ENST00000543637 RALGAPBQ86X10 1494 aa10.18□□□□□ -0.78
NUP43-206ENST00000543637 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
NUP43-206ENST00000543637 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
NUP43-206ENST00000543637 POLR3AO14802 1390 aaPredicted RBP10.17□□□□□ -0.78
NUP43-206ENST00000543637 TONSLQ96HA7 1378 aa10.17□□□□□ -0.78
NUP43-206ENST00000543637 KRT27Q7Z3Y8 459 aa10.17□□□□□ -0.78
NUP43-206ENST00000543637 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
NUP43-206ENST00000543637 CABP1Q9NZU7 370 aa10.17□□□□□ -0.78
NUP43-206ENST00000543637 TOPAZ1Q8N9V7 1692 aa10.17□□□□□ -0.78
NUP43-206ENST00000543637 GLI3P10071 1580 aa10.17□□□□□ -0.78
NUP43-206ENST00000543637 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
NUP43-206ENST00000543637 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
NUP43-206ENST00000543637 CARD11Q9BXL7 1154 aa10.16□□□□□ -0.78
NUP43-206ENST00000543637 STRN4Q9NRL3 753 aa10.16□□□□□ -0.78
NUP43-206ENST00000543637 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
NUP43-206ENST00000543637 NLRP6P59044 892 aa10.15□□□□□ -0.78
NUP43-206ENST00000543637 FAM98CQ17RN3 349 aaKnown RBP10.15□□□□□ -0.78
NUP43-206ENST00000543637 CRYBG1Q9Y4K1 1723 aa10.15□□□□□ -0.78
NUP43-206ENST00000543637 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.79
NUP43-206ENST00000543637 NRAPQ86VF7 1730 aa10.14□□□□□ -0.79
NUP43-206ENST00000543637 ZBTB7CA1YPR0 619 aa10.14□□□□□ -0.79
NUP43-206ENST00000543637 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
NUP43-206ENST00000543637 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
NUP43-206ENST00000543637 KIAA0232Q92628 1395 aa10.14□□□□□ -0.79
NUP43-206ENST00000543637 GCP02774 474 aa10.13□□□□□ -0.79
NUP43-206ENST00000543637 SPATA31A5Q5VU36 1347 aa10.12□□□□□ -0.79
NUP43-206ENST00000543637 SPATA31A7Q8IWB4 1347 aa10.12□□□□□ -0.79
NUP43-206ENST00000543637 USP35Q9P2H5 1018 aa10.12□□□□□ -0.79
NUP43-206ENST00000543637 BLMP54132 1417 aaPredicted RBP10.12□□□□□ -0.79
NUP43-206ENST00000543637 BAG6P46379 1132 aa10.11□□□□□ -0.79
NUP43-206ENST00000543637 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
NUP43-206ENST00000543637 AKAP12Q02952 1782 aa10.11□□□□□ -0.79
NUP43-206ENST00000543637 USP6P35125 1406 aa10.1□□□□□ -0.79
NUP43-206ENST00000543637 PDE3BQ13370 1112 aa10.1□□□□□ -0.79
NUP43-206ENST00000543637 HDGFL2Q7Z4V5 671 aaPredicted RBP10.1□□□□□ -0.79
NUP43-206ENST00000543637 TMC1Q8TDI8 760 aa10.1□□□□□ -0.79
NUP43-206ENST00000543637 SPATA31A1Q5TZJ5 1347 aa10.09□□□□□ -0.79
NUP43-206ENST00000543637 TTC21AQ8NDW8 1320 aa10.09□□□□□ -0.79
NUP43-206ENST00000543637 THRAP3Q9Y2W1 955 aaKnown RBP10.09□□□□□ -0.79
NUP43-206ENST00000543637 KTN1Q86UP2 1357 aaKnown RBP10.09□□□□□ -0.79
NUP43-206ENST00000543637 USP19O94966 1318 aa10.08□□□□□ -0.8
NUP43-206ENST00000543637 TTC21BQ7Z4L5 1316 aa10.08□□□□□ -0.8
NUP43-206ENST00000543637 FAM196AQ6ZSG2 479 aa10.08□□□□□ -0.8
NUP43-206ENST00000543637 BARGINQ6ZT62 677 aa10.08□□□□□ -0.8
NUP43-206ENST00000543637 TCP11L2Q8N4U5 519 aa10.08□□□□□ -0.8
NUP43-206ENST00000543637 TERF2IPQ9NYB0 399 aa10.08□□□□□ -0.8
NUP43-206ENST00000543637 CPDO75976 1380 aa10.08□□□□□ -0.8
NUP43-206ENST00000543637 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
NUP43-206ENST00000543637 NRKQ7Z2Y5 1582 aa10.07□□□□□ -0.8
NUP43-206ENST00000543637 C11orf95C9JLR9 678 aaPredicted RBP10.07□□□□□ -0.8
NUP43-206ENST00000543637 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
NUP43-206ENST00000543637 TOM1L2Q6ZVM7 507 aa10.07□□□□□ -0.8
NUP43-206ENST00000543637 DEFB132Q7Z7B7 95 aa10.07□□□□□ -0.8
NUP43-206ENST00000543637 RGPD5Q99666 1765 aa10.06□□□□□ -0.8
NUP43-206ENST00000543637 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
NUP43-206ENST00000543637 SOX12O15370 315 aa10.06□□□□□ -0.8
NUP43-206ENST00000543637 CSB-PGBD3P0DP91 1061 aa10.06□□□□□ -0.8
NUP43-206ENST00000543637 FAM182BQ5T319 152 aa10.06□□□□□ -0.8
NUP43-206ENST00000543637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.06□□□□□ -0.8
NUP43-206ENST00000543637 PUS7Q96PZ0 661 aaKnown RBP10.06□□□□□ -0.8
NUP43-206ENST00000543637 SSH2Q76I76 1423 aa10.06□□□□□ -0.8
NUP43-206ENST00000543637 AATKQ6ZMQ8 1374 aa10.05□□□□□ -0.8
NUP43-206ENST00000543637 SBNO2Q9Y2G9 1366 aa10.05□□□□□ -0.8
NUP43-206ENST00000543637 PCGF6Q9BYE7 350 aa10.05□□□□□ -0.8
NUP43-206ENST00000543637 PIK3C2AO00443 1686 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 LMO7Q8WWI1 1683 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 THSD7AQ9UPZ6 1657 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 ST20-MTHFSA0A0A6YYL1 179 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 TRIM37O94972 964 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 SLC12A5Q9H2X9 1139 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 TIMELESSQ9UNS1 1208 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 CRB1P82279 1406 aa10.04□□□□□ -0.8
NUP43-206ENST00000543637 CPSF1Q10570 1443 aaKnown RBP10.04□□□□□ -0.8
NUP43-206ENST00000543637 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms