RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 SSH2Q76I76 1423 aa28.71■■■□□ 2.19
OTUB1-211ENST00000543004 PAK3O75914 559 aaPredicted RBP28.7■■■□□ 2.19
OTUB1-211ENST00000543004 HSPA1LP34931 641 aa28.7■■■□□ 2.19
OTUB1-211ENST00000543004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.69■■■□□ 2.18
OTUB1-211ENST00000543004 NSD3Q9BZ95 1437 aa28.68■■■□□ 2.18
OTUB1-211ENST00000543004 ALS2Q96Q42 1657 aa28.67■■■□□ 2.18
OTUB1-211ENST00000543004 EDC4Q6P2E9 1401 aaKnown RBP28.67■■■□□ 2.18
OTUB1-211ENST00000543004 TTC21BQ7Z4L5 1316 aa28.67■■■□□ 2.18
OTUB1-211ENST00000543004 PIK3C2AO00443 1686 aa28.66■■■□□ 2.18
OTUB1-211ENST00000543004 LMOD2Q6P5Q4 547 aa28.65■■■□□ 2.18
OTUB1-211ENST00000543004 SPATA31A3Q5VYP0 1347 aa28.65■■■□□ 2.18
OTUB1-211ENST00000543004 SBNO1A3KN83 1393 aa28.64■■■□□ 2.17
OTUB1-211ENST00000543004 NUTM2GQ5VZR2 741 aa28.63■■■□□ 2.17
OTUB1-211ENST00000543004 ZRANB1Q9UGI0 708 aa28.63■■■□□ 2.17
OTUB1-211ENST00000543004 TNS3Q68CZ2 1445 aa28.63■■■□□ 2.17
OTUB1-211ENST00000543004 PER1O15534 1290 aaPredicted RBP28.62■■■□□ 2.17
OTUB1-211ENST00000543004 NME9Q86XW9 330 aa28.62■■■□□ 2.17
OTUB1-211ENST00000543004 PLEKHG5O94827 1062 aa28.61■■■□□ 2.17
OTUB1-211ENST00000543004 KIF20BQ96Q89 1820 aa28.61■■■□□ 2.17
OTUB1-211ENST00000543004 LRRC59Q96AG4 307 aaKnown RBP28.61■■■□□ 2.17
OTUB1-211ENST00000543004 ABTB2Q8N961 1025 aa28.6■■■□□ 2.17
OTUB1-211ENST00000543004 MARF1Q9Y4F3 1742 aaKnown RBP28.6■■■□□ 2.17
OTUB1-211ENST00000543004 BRD4O60885 1362 aaPredicted RBP28.59■■■□□ 2.17
OTUB1-211ENST00000543004 TTC21AQ8NDW8 1320 aa28.58■■■□□ 2.17
OTUB1-211ENST00000543004 FYB1O15117 783 aa28.57■■■□□ 2.16
OTUB1-211ENST00000543004 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
OTUB1-211ENST00000543004 CNGB1Q14028 1251 aaPredicted RBP28.56■■■□□ 2.16
OTUB1-211ENST00000543004 GGNBP2Q9H3C7 697 aa28.56■■■□□ 2.16
OTUB1-211ENST00000543004 PNPLA6Q8IY17 1366 aa28.55■■■□□ 2.16
OTUB1-211ENST00000543004 NLRP6P59044 892 aa28.54■■■□□ 2.16
OTUB1-211ENST00000543004 CABLES1Q8TDN4 633 aa28.54■■■□□ 2.16
OTUB1-211ENST00000543004 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
OTUB1-211ENST00000543004 CGNL1Q0VF96 1302 aa28.53■■■□□ 2.16
OTUB1-211ENST00000543004 AMER1Q5JTC6 1135 aaPredicted RBP28.53■■■□□ 2.16
OTUB1-211ENST00000543004 ARHGEF10O15013 1369 aa28.53■■■□□ 2.16
OTUB1-211ENST00000543004 CRYBG1Q9Y4K1 1723 aa28.53■■■□□ 2.16
OTUB1-211ENST00000543004 MED1Q15648 1581 aaPredicted RBP28.53■■■□□ 2.16
OTUB1-211ENST00000543004 COL22A1Q8NFW1 1626 aaPredicted RBP28.52■■■□□ 2.16
OTUB1-211ENST00000543004 ABCA3Q99758 1704 aa28.5■■■□□ 2.15
OTUB1-211ENST00000543004 USP54Q70EL1 1684 aa28.5■■■□□ 2.15
OTUB1-211ENST00000543004 ANKRD26Q9UPS8 1709 aa28.5■■■□□ 2.15
OTUB1-211ENST00000543004 OVOS2A0A0J9YW53 1432 aa28.5■■■□□ 2.15
OTUB1-211ENST00000543004 OVOS2Q6IE36 1432 aa28.5■■■□□ 2.15
OTUB1-211ENST00000543004 PHRF1Q9P1Y6 1649 aaKnown RBP28.49■■■□□ 2.15
OTUB1-211ENST00000543004 JCADQ9P266 1359 aa28.49■■■□□ 2.15
OTUB1-211ENST00000543004 CC2D1BQ5T0F9 858 aaKnown RBP28.49■■■□□ 2.15
OTUB1-211ENST00000543004 USP31Q70CQ4 1352 aa28.48■■■□□ 2.15
OTUB1-211ENST00000543004 ILDR1Q86SU0 546 aaPredicted RBP28.47■■■□□ 2.15
OTUB1-211ENST00000543004 NLRP13Q86W25 1043 aa28.47■■■□□ 2.15
OTUB1-211ENST00000543004 SOX12O15370 315 aa28.46■■■□□ 2.15
OTUB1-211ENST00000543004 FBLN1P23142 703 aa28.45■■■□□ 2.14
OTUB1-211ENST00000543004 COG3Q96JB2 828 aa28.45■■■□□ 2.14
OTUB1-211ENST00000543004 USP19O94966 1318 aa28.44■■■□□ 2.14
OTUB1-211ENST00000543004 SLIT3O75094 1523 aa28.43■■■□□ 2.14
OTUB1-211ENST00000543004 NUTM2BA6NNL0 878 aaPredicted RBP28.41■■■□□ 2.14
OTUB1-211ENST00000543004 NUTM2EB1AL46 878 aaPredicted RBP28.41■■■□□ 2.14
OTUB1-211ENST00000543004 NSD2O96028 1365 aa28.41■■■□□ 2.14
OTUB1-211ENST00000543004 NUTM2AQ8IVF1 878 aaPredicted RBP28.41■■■□□ 2.14
OTUB1-211ENST00000543004 TNNT2P45379 298 aaPredicted RBP28.4■■■□□ 2.14
OTUB1-211ENST00000543004 GCP02774 474 aa28.4■■■□□ 2.14
OTUB1-211ENST00000543004 NPC1L1Q9UHC9 1359 aa28.39■■■□□ 2.14
OTUB1-211ENST00000543004 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
OTUB1-211ENST00000543004 NFAT5O94916 1531 aa28.38■■■□□ 2.13
OTUB1-211ENST00000543004 LRP6O75581 1613 aa28.37■■■□□ 2.13
OTUB1-211ENST00000543004 HAP1P54257 671 aaPredicted RBP28.37■■■□□ 2.13
OTUB1-211ENST00000543004 ZC3H6P61129 1189 aaKnown RBP28.36■■■□□ 2.13
OTUB1-211ENST00000543004 MAP2P11137 1827 aaKnown RBP28.35■■■□□ 2.13
OTUB1-211ENST00000543004 LTN1O94822 1766 aa28.35■■■□□ 2.13
OTUB1-211ENST00000543004 SPATA31A6Q5VVP1 1343 aa28.34■■■□□ 2.13
OTUB1-211ENST00000543004 ADAMTS2O95450 1211 aa28.34■■■□□ 2.13
OTUB1-211ENST00000543004 ZBTB7CA1YPR0 619 aa28.32■■■□□ 2.12
OTUB1-211ENST00000543004 RRS1Q15050 365 aaKnown RBP28.32■■■□□ 2.12
OTUB1-211ENST00000543004 KCNH5Q8NCM2 988 aa28.32■■■□□ 2.12
OTUB1-211ENST00000543004 KIAA0232Q92628 1395 aa28.31■■■□□ 2.12
OTUB1-211ENST00000543004 PARD3Q8TEW0 1356 aa28.29■■■□□ 2.12
OTUB1-211ENST00000543004 CHRNA2Q15822 529 aa28.29■■■□□ 2.12
OTUB1-211ENST00000543004 PEAK1Q9H792 1746 aa28.27■■■□□ 2.12
OTUB1-211ENST00000543004 EMILIN1Q9Y6C2 1016 aa28.27■■■□□ 2.12
OTUB1-211ENST00000543004 MAP3K19Q56UN5 1328 aa28.27■■■□□ 2.12
OTUB1-211ENST00000543004 RGPD5Q99666 1765 aa28.26■■■□□ 2.12
OTUB1-211ENST00000543004 ARHGEF25Q86VW2 580 aa28.26■■■□□ 2.11
OTUB1-211ENST00000543004 FAM83GA6ND36 823 aa28.25■■■□□ 2.11
OTUB1-211ENST00000543004 DIEXFQ68CQ4 756 aaKnown RBP28.25■■■□□ 2.11
OTUB1-211ENST00000543004 PRKRIP1Q9H875 184 aaPredicted RBP28.25■■■□□ 2.11
OTUB1-211ENST00000543004 COL18A1P39060 1754 aa28.25■■■□□ 2.11
OTUB1-211ENST00000543004 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
OTUB1-211ENST00000543004 CPDO75976 1380 aa28.24■■■□□ 2.11
OTUB1-211ENST00000543004 AATKQ6ZMQ8 1374 aa28.24■■■□□ 2.11
OTUB1-211ENST00000543004 PRDM11Q9NQV5 511 aa28.24■■■□□ 2.11
OTUB1-211ENST00000543004 PPM1GO15355 546 aaPredicted RBP28.21■■■□□ 2.11
OTUB1-211ENST00000543004 C8orf37Q96NL8 207 aa28.21■■■□□ 2.11
OTUB1-211ENST00000543004 PLCH1Q4KWH8 1693 aa28.21■■■□□ 2.11
OTUB1-211ENST00000543004 COL14A1Q05707 1796 aaKnown RBP28.21■■■□□ 2.11
OTUB1-211ENST00000543004 LMO7Q8WWI1 1683 aa28.21■■■□□ 2.11
OTUB1-211ENST00000543004 PPP2R1AP30153 589 aa28.21■■■□□ 2.11
OTUB1-211ENST00000543004 AXIN2Q9Y2T1 843 aa28.21■■■□□ 2.11
OTUB1-211ENST00000543004 RALBP1Q15311 655 aa28.2■■■□□ 2.1
OTUB1-211ENST00000543004 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
OTUB1-211ENST00000543004 ANP32CO43423 234 aa28.18■■■□□ 2.1
OTUB1-211ENST00000543004 CAMTA1Q9Y6Y1 1673 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms