RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SSH2Q76I76 1423 aa23.77■■□□□ 1.4
RABGGTA-203ENST00000543002 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
RABGGTA-203ENST00000543002 POLR3GLQ9BT43 218 aa23.77■■□□□ 1.4
RABGGTA-203ENST00000543002 A0A1W2PP64 1363 aa23.76■■□□□ 1.39
RABGGTA-203ENST00000543002 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
RABGGTA-203ENST00000543002 COL22A1Q8NFW1 1626 aaPredicted RBP23.76■■□□□ 1.39
RABGGTA-203ENST00000543002 ANKRD36BQ8N2N9 1353 aa23.75■■□□□ 1.39
RABGGTA-203ENST00000543002 KIF7Q2M1P5 1343 aa23.74■■□□□ 1.39
RABGGTA-203ENST00000543002 MON2Q7Z3U7 1717 aa23.74■■□□□ 1.39
RABGGTA-203ENST00000543002 MYOM1P52179 1685 aa23.74■■□□□ 1.39
RABGGTA-203ENST00000543002 TTC21BQ7Z4L5 1316 aa23.73■■□□□ 1.39
RABGGTA-203ENST00000543002 ABTB2Q8N961 1025 aa23.72■■□□□ 1.39
RABGGTA-203ENST00000543002 TTC21AQ8NDW8 1320 aa23.71■■□□□ 1.39
RABGGTA-203ENST00000543002 NRKQ7Z2Y5 1582 aa23.71■■□□□ 1.39
RABGGTA-203ENST00000543002 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
RABGGTA-203ENST00000543002 NUTM2BA6NNL0 878 aaPredicted RBP23.71■■□□□ 1.39
RABGGTA-203ENST00000543002 NUTM2EB1AL46 878 aaPredicted RBP23.71■■□□□ 1.39
RABGGTA-203ENST00000543002 NUTM2AQ8IVF1 878 aaPredicted RBP23.71■■□□□ 1.39
RABGGTA-203ENST00000543002 LRP6O75581 1613 aa23.69■■□□□ 1.38
RABGGTA-203ENST00000543002 CCDC7Q96M83 1385 aa23.68■■□□□ 1.38
RABGGTA-203ENST00000543002 MED1Q15648 1581 aaPredicted RBP23.68■■□□□ 1.38
RABGGTA-203ENST00000543002 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
RABGGTA-203ENST00000543002 CABLES1Q8TDN4 633 aa23.67■■□□□ 1.38
RABGGTA-203ENST00000543002 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
RABGGTA-203ENST00000543002 NLRP13Q86W25 1043 aa23.66■■□□□ 1.38
RABGGTA-203ENST00000543002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.66■■□□□ 1.38
RABGGTA-203ENST00000543002 PLEKHG5O94827 1062 aa23.65■■□□□ 1.38
RABGGTA-203ENST00000543002 PIK3C2AO00443 1686 aa23.64■■□□□ 1.38
RABGGTA-203ENST00000543002 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.38
RABGGTA-203ENST00000543002 NLRP6P59044 892 aa23.64■■□□□ 1.38
RABGGTA-203ENST00000543002 CARD14Q9BXL6 1004 aa23.64■■□□□ 1.38
RABGGTA-203ENST00000543002 USP19O94966 1318 aa23.64■■□□□ 1.37
RABGGTA-203ENST00000543002 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
RABGGTA-203ENST00000543002 MEX3CQ5U5Q3 659 aaKnown RBP23.62■■□□□ 1.37
RABGGTA-203ENST00000543002 NME9Q86XW9 330 aa23.62■■□□□ 1.37
RABGGTA-203ENST00000543002 PANK3Q9H999 370 aa23.62■■□□□ 1.37
RABGGTA-203ENST00000543002 ABCA3Q99758 1704 aa23.62■■□□□ 1.37
RABGGTA-203ENST00000543002 CRYBG1Q9Y4K1 1723 aa23.62■■□□□ 1.37
RABGGTA-203ENST00000543002 USP31Q70CQ4 1352 aa23.62■■□□□ 1.37
RABGGTA-203ENST00000543002 NSD3Q9BZ95 1437 aa23.6■■□□□ 1.37
RABGGTA-203ENST00000543002 PHRF1Q9P1Y6 1649 aaKnown RBP23.59■■□□□ 1.37
RABGGTA-203ENST00000543002 ZRANB1Q9UGI0 708 aa23.59■■□□□ 1.37
RABGGTA-203ENST00000543002 SLIT3O75094 1523 aa23.57■■□□□ 1.36
RABGGTA-203ENST00000543002 FYB1O15117 783 aa23.57■■□□□ 1.36
RABGGTA-203ENST00000543002 GCP02774 474 aa23.57■■□□□ 1.36
RABGGTA-203ENST00000543002 C8orf37Q96NL8 207 aa23.57■■□□□ 1.36
RABGGTA-203ENST00000543002 USP54Q70EL1 1684 aa23.56■■□□□ 1.36
RABGGTA-203ENST00000543002 MARF1Q9Y4F3 1742 aaKnown RBP23.56■■□□□ 1.36
RABGGTA-203ENST00000543002 OVOS2A0A0J9YW53 1432 aa23.55■■□□□ 1.36
RABGGTA-203ENST00000543002 OVOS2Q6IE36 1432 aa23.55■■□□□ 1.36
RABGGTA-203ENST00000543002 CGNL1Q0VF96 1302 aa23.54■■□□□ 1.36
RABGGTA-203ENST00000543002 KCNH5Q8NCM2 988 aa23.54■■□□□ 1.36
RABGGTA-203ENST00000543002 NGLY1Q96IV0 654 aa23.54■■□□□ 1.36
RABGGTA-203ENST00000543002 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
RABGGTA-203ENST00000543002 COG3Q96JB2 828 aa23.53■■□□□ 1.36
RABGGTA-203ENST00000543002 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
RABGGTA-203ENST00000543002 ZC3H6P61129 1189 aaKnown RBP23.52■■□□□ 1.36
RABGGTA-203ENST00000543002 CPDO75976 1380 aa23.51■■□□□ 1.35
RABGGTA-203ENST00000543002 KIAA0232Q92628 1395 aa23.51■■□□□ 1.35
RABGGTA-203ENST00000543002 FAM83GA6ND36 823 aa23.51■■□□□ 1.35
RABGGTA-203ENST00000543002 FNBP4Q8N3X1 1017 aaPredicted RBP23.51■■□□□ 1.35
RABGGTA-203ENST00000543002 KIF20BQ96Q89 1820 aa23.5■■□□□ 1.35
RABGGTA-203ENST00000543002 AFF2P51816 1311 aa23.5■■□□□ 1.35
RABGGTA-203ENST00000543002 PRDM11Q9NQV5 511 aa23.5■■□□□ 1.35
RABGGTA-203ENST00000543002 KNSTRNQ9Y448 316 aa23.5■■□□□ 1.35
RABGGTA-203ENST00000543002 PER1O15534 1290 aaPredicted RBP23.49■■□□□ 1.35
RABGGTA-203ENST00000543002 SOX12O15370 315 aa23.48■■□□□ 1.35
RABGGTA-203ENST00000543002 RGS17Q9UGC6 210 aaPredicted RBP23.48■■□□□ 1.35
RABGGTA-203ENST00000543002 SLIT2O94813 1529 aa23.48■■□□□ 1.35
RABGGTA-203ENST00000543002 NFAT5O94916 1531 aa23.48■■□□□ 1.35
RABGGTA-203ENST00000543002 COL14A1Q05707 1796 aaKnown RBP23.47■■□□□ 1.35
RABGGTA-203ENST00000543002 CHRNA2Q15822 529 aa23.46■■□□□ 1.35
RABGGTA-203ENST00000543002 ZNF772Q68DY9 489 aaPredicted RBP23.46■■□□□ 1.35
RABGGTA-203ENST00000543002 ARHGEF25Q86VW2 580 aa23.46■■□□□ 1.35
RABGGTA-203ENST00000543002 USP21Q9UK80 565 aa23.45■■□□□ 1.34
RABGGTA-203ENST00000543002 NSD2O96028 1365 aa23.45■■□□□ 1.34
RABGGTA-203ENST00000543002 AMER1Q5JTC6 1135 aaPredicted RBP23.44■■□□□ 1.34
RABGGTA-203ENST00000543002 BCL9LQ86UU0 1499 aa23.44■■□□□ 1.34
RABGGTA-203ENST00000543002 PLCH1Q4KWH8 1693 aa23.43■■□□□ 1.34
RABGGTA-203ENST00000543002 AATKQ6ZMQ8 1374 aa23.42■■□□□ 1.34
RABGGTA-203ENST00000543002 ZBTB7CA1YPR0 619 aa23.42■■□□□ 1.34
RABGGTA-203ENST00000543002 BTG4Q9NY30 223 aa23.42■■□□□ 1.34
RABGGTA-203ENST00000543002 NWD2Q9ULI1 1742 aa23.42■■□□□ 1.34
RABGGTA-203ENST00000543002 ZNF316A6NFI3 1004 aaPredicted RBP23.41■■□□□ 1.34
RABGGTA-203ENST00000543002 UNC5CLQ8IV45 518 aa23.41■■□□□ 1.34
RABGGTA-203ENST00000543002 ANKRD26Q9UPS8 1709 aa23.4■■□□□ 1.34
RABGGTA-203ENST00000543002 LMO7Q8WWI1 1683 aa23.4■■□□□ 1.34
RABGGTA-203ENST00000543002 NPC1L1Q9UHC9 1359 aa23.39■■□□□ 1.33
RABGGTA-203ENST00000543002 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.39■■□□□ 1.33
RABGGTA-203ENST00000543002 FBLN1P23142 703 aa23.38■■□□□ 1.33
RABGGTA-203ENST00000543002 POTEAQ6S8J7 498 aa23.38■■□□□ 1.33
RABGGTA-203ENST00000543002 TRPC5Q9UL62 973 aaPredicted RBP23.38■■□□□ 1.33
RABGGTA-203ENST00000543002 CAMTA1Q9Y6Y1 1673 aa23.38■■□□□ 1.33
RABGGTA-203ENST00000543002 COL18A1P39060 1754 aa23.38■■□□□ 1.33
RABGGTA-203ENST00000543002 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
RABGGTA-203ENST00000543002 QTRT2Q9H974 415 aaKnown RBP23.37■■□□□ 1.33
RABGGTA-203ENST00000543002 ATRNO75882 1429 aa23.37■■□□□ 1.33
RABGGTA-203ENST00000543002 NRAPQ86VF7 1730 aa23.36■■□□□ 1.33
RABGGTA-203ENST00000543002 MORC1Q86VD1 984 aa23.36■■□□□ 1.33
RABGGTA-203ENST00000543002 ABCC6O95255 1503 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms