RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 HRCP23327 699 aa9.69□□□□□ -0.86
MDM2-228ENST00000542502 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
MDM2-228ENST00000542502 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
MDM2-228ENST00000542502 TERTO14746 1132 aaKnown RBP9.68□□□□□ -0.86
MDM2-228ENST00000542502 CTHP32929 405 aa9.68□□□□□ -0.86
MDM2-228ENST00000542502 MPNDQ8N594 471 aa9.68□□□□□ -0.86
MDM2-228ENST00000542502 TLL2Q9Y6L7 1015 aa9.68□□□□□ -0.86
MDM2-228ENST00000542502 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
MDM2-228ENST00000542502 WIPF1O43516 503 aa9.66□□□□□ -0.86
MDM2-228ENST00000542502 BMP1P13497 986 aa9.66□□□□□ -0.86
MDM2-228ENST00000542502 TRIM46Q7Z4K8 759 aa9.66□□□□□ -0.86
MDM2-228ENST00000542502 F12P00748 615 aaPredicted RBP9.65□□□□□ -0.86
MDM2-228ENST00000542502 PDE4DQ08499 809 aa9.65□□□□□ -0.86
MDM2-228ENST00000542502 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
MDM2-228ENST00000542502 MAP10Q9P2G4 905 aa9.64□□□□□ -0.87
MDM2-228ENST00000542502 NNTQ13423 1086 aa9.63□□□□□ -0.87
MDM2-228ENST00000542502 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
MDM2-228ENST00000542502 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
MDM2-228ENST00000542502 MYSM1Q5VVJ2 828 aa9.63□□□□□ -0.87
MDM2-228ENST00000542502 FAM174AQ8TBP5 190 aa9.63□□□□□ -0.87
MDM2-228ENST00000542502 TUSC1Q2TAM9 212 aa9.62□□□□□ -0.87
MDM2-228ENST00000542502 LIMD1Q9UGP4 676 aa9.62□□□□□ -0.87
MDM2-228ENST00000542502 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
MDM2-228ENST00000542502 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
MDM2-228ENST00000542502 ADH1CP00326 375 aa9.6□□□□□ -0.87
MDM2-228ENST00000542502 INSM1Q01101 510 aaPredicted RBP9.6□□□□□ -0.87
MDM2-228ENST00000542502 QPCTQ16769 361 aa9.6□□□□□ -0.87
MDM2-228ENST00000542502 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
MDM2-228ENST00000542502 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
MDM2-228ENST00000542502 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
MDM2-228ENST00000542502 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
MDM2-228ENST00000542502 LILRB3O75022 631 aa9.59□□□□□ -0.87
MDM2-228ENST00000542502 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
MDM2-228ENST00000542502 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
MDM2-228ENST00000542502 ZFP42Q96MM3 310 aa9.59□□□□□ -0.87
MDM2-228ENST00000542502 SLC24A3Q9HC58 644 aa9.59□□□□□ -0.87
MDM2-228ENST00000542502 TIMP2P16035 220 aa9.58□□□□□ -0.88
MDM2-228ENST00000542502 WDR4P57081 412 aaKnown RBP9.58□□□□□ -0.88
MDM2-228ENST00000542502 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
MDM2-228ENST00000542502 TSC1Q92574 1164 aa9.58□□□□□ -0.88
MDM2-228ENST00000542502 KLF16Q9BXK1 252 aaPredicted RBP9.58□□□□□ -0.88
MDM2-228ENST00000542502 STK17AQ9UEE5 414 aa9.58□□□□□ -0.88
MDM2-228ENST00000542502 BPHLQ86WA6 291 aaPredicted RBP9.57□□□□□ -0.88
MDM2-228ENST00000542502 NPAS3Q8IXF0 933 aa9.57□□□□□ -0.88
MDM2-228ENST00000542502 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
MDM2-228ENST00000542502 AGERQ15109 404 aa9.56□□□□□ -0.88
MDM2-228ENST00000542502 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
MDM2-228ENST00000542502 MRPL14Q6P1L8 145 aaKnown RBP9.56□□□□□ -0.88
MDM2-228ENST00000542502 SCARF1Q14162 830 aa9.55□□□□□ -0.88
MDM2-228ENST00000542502 ARMC2Q8NEN0 867 aa9.55□□□□□ -0.88
MDM2-228ENST00000542502 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
MDM2-228ENST00000542502 CLK2P49760 499 aaKnown RBP9.54□□□□□ -0.88
MDM2-228ENST00000542502 NR5A1Q13285 461 aa9.54□□□□□ -0.88
MDM2-228ENST00000542502 RTL5Q5HYW3 569 aaPredicted RBP9.54□□□□□ -0.88
MDM2-228ENST00000542502 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
MDM2-228ENST00000542502 GRM5P41594 1212 aa9.53□□□□□ -0.88
MDM2-228ENST00000542502 PURBQ96QR8 312 aaKnown RBP9.53□□□□□ -0.88
MDM2-228ENST00000542502 NR3C2P08235 984 aa9.52□□□□□ -0.89
MDM2-228ENST00000542502 NBPF14Q5TI25 921 aa9.52□□□□□ -0.89
MDM2-228ENST00000542502 SH3RF1Q7Z6J0 888 aa9.52□□□□□ -0.89
MDM2-228ENST00000542502 IRF7Q92985 503 aa9.52□□□□□ -0.89
MDM2-228ENST00000542502 H3BM21 787 aa9.51□□□□□ -0.89
MDM2-228ENST00000542502 ZIC2O95409 532 aaPredicted RBP9.51□□□□□ -0.89
MDM2-228ENST00000542502 ITPKCQ96DU7 683 aa9.51□□□□□ -0.89
MDM2-228ENST00000542502 C1QTNF2Q9BXJ5 285 aa9.51□□□□□ -0.89
MDM2-228ENST00000542502 ZFAND3Q9H8U3 227 aa9.51□□□□□ -0.89
MDM2-228ENST00000542502 VEGFBP49765 207 aa9.5□□□□□ -0.89
MDM2-228ENST00000542502 POLR3EQ9NVU0 708 aa9.5□□□□□ -0.89
MDM2-228ENST00000542502 GMPRP36959 345 aa9.49□□□□□ -0.89
MDM2-228ENST00000542502 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
MDM2-228ENST00000542502 TRMT44Q8IYL2 757 aaKnown RBP9.48□□□□□ -0.89
MDM2-228ENST00000542502 MAP4K5Q9Y4K4 846 aa9.48□□□□□ -0.89
MDM2-228ENST00000542502 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
MDM2-228ENST00000542502 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.89
MDM2-228ENST00000542502 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
MDM2-228ENST00000542502 SOBPA7XYQ1 873 aa9.45□□□□□ -0.9
MDM2-228ENST00000542502 FSHRP23945 695 aa9.45□□□□□ -0.9
MDM2-228ENST00000542502 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
MDM2-228ENST00000542502 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
MDM2-228ENST00000542502 VASH1Q7L8A9 365 aaPredicted RBP9.45□□□□□ -0.9
MDM2-228ENST00000542502 MEIOBQ8N635 442 aa9.45□□□□□ -0.9
MDM2-228ENST00000542502 ERBB4Q15303 1308 aa9.45□□□□□ -0.9
MDM2-228ENST00000542502 UPP2O95045 317 aa9.44□□□□□ -0.9
MDM2-228ENST00000542502 MAN1A2O60476 641 aa9.43□□□□□ -0.9
MDM2-228ENST00000542502 SKIV2LQ15477 1246 aaKnown RBP9.43□□□□□ -0.9
MDM2-228ENST00000542502 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
MDM2-228ENST00000542502 FAM181BA6NEQ2 426 aa9.42□□□□□ -0.9
MDM2-228ENST00000542502 BMP2P12643 396 aa9.42□□□□□ -0.9
MDM2-228ENST00000542502 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
MDM2-228ENST00000542502 CCDC116Q8IYX3 515 aa9.42□□□□□ -0.9
MDM2-228ENST00000542502 ZSCAN1Q8NBB4 408 aa9.42□□□□□ -0.9
MDM2-228ENST00000542502 CARD14Q9BXL6 1004 aa9.42□□□□□ -0.9
MDM2-228ENST00000542502 EMILIN1Q9Y6C2 1016 aa9.42□□□□□ -0.9
MDM2-228ENST00000542502 VSIG8P0DPA2 414 aa9.41□□□□□ -0.9
MDM2-228ENST00000542502 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
MDM2-228ENST00000542502 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
MDM2-228ENST00000542502 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
MDM2-228ENST00000542502 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
MDM2-228ENST00000542502 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
MDM2-228ENST00000542502 FKBPLQ9UIM3 349 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms