RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
UBC-211ENST00000542416 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
UBC-211ENST00000542416 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
UBC-211ENST00000542416 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
UBC-211ENST00000542416 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
UBC-211ENST00000542416 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
UBC-211ENST00000542416 DCAF11Q8TEB1 546 aa13.12□□□□□ -0.31
UBC-211ENST00000542416 TULP4Q9NRJ4 1543 aa13.12□□□□□ -0.31
UBC-211ENST00000542416 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
UBC-211ENST00000542416 C11orf95C9JLR9 678 aaPredicted RBP13.11□□□□□ -0.31
UBC-211ENST00000542416 EVA1CP58658 441 aa13.11□□□□□ -0.31
UBC-211ENST00000542416 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
UBC-211ENST00000542416 FAM182BQ5T319 152 aa13.11□□□□□ -0.31
UBC-211ENST00000542416 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
UBC-211ENST00000542416 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
UBC-211ENST00000542416 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
UBC-211ENST00000542416 KDM2AQ9Y2K7 1162 aa13.11□□□□□ -0.31
UBC-211ENST00000542416 COL14A1Q05707 1796 aaKnown RBP13.1□□□□□ -0.31
UBC-211ENST00000542416 TRIM37O94972 964 aa13.1□□□□□ -0.31
UBC-211ENST00000542416 APBA3O96018 575 aa13.1□□□□□ -0.31
UBC-211ENST00000542416 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
UBC-211ENST00000542416 NBPF8Q3BBV2 869 aa13.1□□□□□ -0.31
UBC-211ENST00000542416 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
UBC-211ENST00000542416 STRN4Q9NRL3 753 aa13.1□□□□□ -0.31
UBC-211ENST00000542416 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
UBC-211ENST00000542416 KIAA0232Q92628 1395 aa13.09□□□□□ -0.31
UBC-211ENST00000542416 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
UBC-211ENST00000542416 CCDC61Q9Y6R9 512 aa13.08□□□□□ -0.32
UBC-211ENST00000542416 ZC3H6P61129 1189 aaKnown RBP13.07□□□□□ -0.32
UBC-211ENST00000542416 TCP11L2Q8N4U5 519 aa13.07□□□□□ -0.32
UBC-211ENST00000542416 THRAP3Q9Y2W1 955 aaKnown RBP13.07□□□□□ -0.32
UBC-211ENST00000542416 ATP7BP35670 1465 aa13.07□□□□□ -0.32
UBC-211ENST00000542416 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
UBC-211ENST00000542416 NRAPQ86VF7 1730 aa13.06□□□□□ -0.32
UBC-211ENST00000542416 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
UBC-211ENST00000542416 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
UBC-211ENST00000542416 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
UBC-211ENST00000542416 CDK19Q9BWU1 502 aa13.06□□□□□ -0.32
UBC-211ENST00000542416 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
UBC-211ENST00000542416 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
UBC-211ENST00000542416 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
UBC-211ENST00000542416 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
UBC-211ENST00000542416 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
UBC-211ENST00000542416 ABTB2Q8N961 1025 aa13.05□□□□□ -0.32
UBC-211ENST00000542416 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
UBC-211ENST00000542416 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
UBC-211ENST00000542416 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
UBC-211ENST00000542416 ACEP12821 1306 aa13.04□□□□□ -0.32
UBC-211ENST00000542416 CPDO75976 1380 aa13.04□□□□□ -0.32
UBC-211ENST00000542416 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
UBC-211ENST00000542416 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
UBC-211ENST00000542416 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
UBC-211ENST00000542416 SPON1Q9HCB6 807 aa13.02□□□□□ -0.33
UBC-211ENST00000542416 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.33
UBC-211ENST00000542416 BRD4O60885 1362 aaPredicted RBP13.02□□□□□ -0.33
UBC-211ENST00000542416 GCP02774 474 aa13.01□□□□□ -0.33
UBC-211ENST00000542416 YY1P25490 414 aa13.01□□□□□ -0.33
UBC-211ENST00000542416 USP19O94966 1318 aa13□□□□□ -0.33
UBC-211ENST00000542416 KCNQ2O43526 872 aa12.99□□□□□ -0.33
UBC-211ENST00000542416 PLSCR1O15162 318 aa12.98□□□□□ -0.33
UBC-211ENST00000542416 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
UBC-211ENST00000542416 NINLQ9Y2I6 1382 aa12.97□□□□□ -0.33
UBC-211ENST00000542416 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
UBC-211ENST00000542416 DDB1Q16531 1140 aa12.96□□□□□ -0.33
UBC-211ENST00000542416 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.34
UBC-211ENST00000542416 CRYBG1Q9Y4K1 1723 aa12.96□□□□□ -0.34
UBC-211ENST00000542416 OVOS2A0A0G2JMS6 1433 aa12.96□□□□□ -0.34
UBC-211ENST00000542416 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.34
UBC-211ENST00000542416 CRB1P82279 1406 aa12.96□□□□□ -0.34
UBC-211ENST00000542416 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.34
UBC-211ENST00000542416 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.34
UBC-211ENST00000542416 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
UBC-211ENST00000542416 NLRP6P59044 892 aa12.95□□□□□ -0.34
UBC-211ENST00000542416 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
UBC-211ENST00000542416 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
UBC-211ENST00000542416 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
UBC-211ENST00000542416 TOM1L2Q6ZVM7 507 aa12.94□□□□□ -0.34
UBC-211ENST00000542416 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
UBC-211ENST00000542416 COL5A2P05997 1499 aaPredicted RBP12.93□□□□□ -0.34
UBC-211ENST00000542416 PHRF1Q9P1Y6 1649 aaKnown RBP12.92□□□□□ -0.34
UBC-211ENST00000542416 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
UBC-211ENST00000542416 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
UBC-211ENST00000542416 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
UBC-211ENST00000542416 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
UBC-211ENST00000542416 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
UBC-211ENST00000542416 KCNH5Q8NCM2 988 aa12.91□□□□□ -0.34
UBC-211ENST00000542416 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
UBC-211ENST00000542416 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
UBC-211ENST00000542416 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
UBC-211ENST00000542416 BCL9O00512 1426 aa12.9□□□□□ -0.34
UBC-211ENST00000542416 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
UBC-211ENST00000542416 USP6P35125 1406 aa12.89□□□□□ -0.35
UBC-211ENST00000542416 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
UBC-211ENST00000542416 EXOC5O00471 708 aa12.88□□□□□ -0.35
UBC-211ENST00000542416 CSB-PGBD3P0DP91 1061 aa12.88□□□□□ -0.35
UBC-211ENST00000542416 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
UBC-211ENST00000542416 STK32BQ9NY57 414 aa12.88□□□□□ -0.35
UBC-211ENST00000542416 RREB1Q92766 1687 aa12.88□□□□□ -0.35
UBC-211ENST00000542416 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
UBC-211ENST00000542416 ARHGEF25Q86VW2 580 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms