RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 SPATA31A5Q5VU36 1347 aa28■■■□□ 2.07
RAP1B-227ENST00000542018 SPATA31A7Q8IWB4 1347 aa28■■■□□ 2.07
RAP1B-227ENST00000542018 TRAK1Q9UPV9 953 aa28■■■□□ 2.07
RAP1B-227ENST00000542018 TULP4Q9NRJ4 1543 aa28■■■□□ 2.07
RAP1B-227ENST00000542018 RGPD1P0DJD0 1748 aa28■■■□□ 2.07
RAP1B-227ENST00000542018 MINK1Q8N4C8 1332 aaPredicted RBP27.98■■■□□ 2.07
RAP1B-227ENST00000542018 EN1Q05925 392 aaPredicted RBP27.98■■■□□ 2.07
RAP1B-227ENST00000542018 TNS1Q9HBL0 1735 aaKnown RBP27.98■■■□□ 2.07
RAP1B-227ENST00000542018 GPRASP1Q5JY77 1395 aa27.97■■■□□ 2.07
RAP1B-227ENST00000542018 WASLO00401 505 aaPredicted RBP27.94■■■□□ 2.06
RAP1B-227ENST00000542018 DISP2A7MBM2 1401 aa27.93■■■□□ 2.06
RAP1B-227ENST00000542018 EIF3AQ14152 1382 aaKnown RBP27.91■■■□□ 2.06
RAP1B-227ENST00000542018 R3HDM1Q15032 1099 aaKnown RBP27.88■■■□□ 2.05
RAP1B-227ENST00000542018 NGDNQ8NEJ9 315 aaKnown RBP27.88■■■□□ 2.05
RAP1B-227ENST00000542018 PRDM11Q9NQV5 511 aa27.88■■■□□ 2.05
RAP1B-227ENST00000542018 PHRF1Q9P1Y6 1649 aaKnown RBP27.88■■■□□ 2.05
RAP1B-227ENST00000542018 ATP7BP35670 1465 aa27.88■■■□□ 2.05
RAP1B-227ENST00000542018 SPATA31A1Q5TZJ5 1347 aa27.88■■■□□ 2.05
RAP1B-227ENST00000542018 ARHGEF28Q8N1W1 1705 aaKnown RBP27.87■■■□□ 2.05
RAP1B-227ENST00000542018 PAK3O75914 559 aaPredicted RBP27.87■■■□□ 2.05
RAP1B-227ENST00000542018 KDM2AQ9Y2K7 1162 aa27.87■■■□□ 2.05
RAP1B-227ENST00000542018 KIAA0232Q92628 1395 aa27.86■■■□□ 2.05
RAP1B-227ENST00000542018 RAB3GAP2Q9H2M9 1393 aa27.86■■■□□ 2.05
RAP1B-227ENST00000542018 EZH2Q15910 746 aaKnown RBP27.86■■■□□ 2.05
RAP1B-227ENST00000542018 ITSN1Q15811 1721 aa27.84■■■□□ 2.05
RAP1B-227ENST00000542018 CHRNA2Q15822 529 aa27.84■■■□□ 2.05
RAP1B-227ENST00000542018 DCAF11Q8TEB1 546 aa27.84■■■□□ 2.05
RAP1B-227ENST00000542018 CAMKK2Q96RR4 588 aa27.84■■■□□ 2.05
RAP1B-227ENST00000542018 NUDT16Q96DE0 195 aaKnown RBP27.82■■■□□ 2.04
RAP1B-227ENST00000542018 TRIM37O94972 964 aa27.8■■■□□ 2.04
RAP1B-227ENST00000542018 TOPAZ1Q8N9V7 1692 aa27.78■■■□□ 2.04
RAP1B-227ENST00000542018 ZC3H6P61129 1189 aaKnown RBP27.78■■■□□ 2.04
RAP1B-227ENST00000542018 STRN4Q9NRL3 753 aa27.78■■■□□ 2.04
RAP1B-227ENST00000542018 NUTM2GQ5VZR2 741 aa27.77■■■□□ 2.04
RAP1B-227ENST00000542018 FAM196AQ6ZSG2 479 aa27.77■■■□□ 2.04
RAP1B-227ENST00000542018 RREB1Q92766 1687 aa27.76■■■□□ 2.03
RAP1B-227ENST00000542018 POLR3AO14802 1390 aaPredicted RBP27.75■■■□□ 2.03
RAP1B-227ENST00000542018 SSH2Q76I76 1423 aa27.75■■■□□ 2.03
RAP1B-227ENST00000542018 CAMTA1Q9Y6Y1 1673 aa27.75■■■□□ 2.03
RAP1B-227ENST00000542018 NRKQ7Z2Y5 1582 aa27.74■■■□□ 2.03
RAP1B-227ENST00000542018 LMO7Q8WWI1 1683 aa27.74■■■□□ 2.03
RAP1B-227ENST00000542018 CDK19Q9BWU1 502 aa27.73■■■□□ 2.03
RAP1B-227ENST00000542018 NUP188Q5SRE5 1749 aa27.72■■■□□ 2.03
RAP1B-227ENST00000542018 ACEP12821 1306 aa27.72■■■□□ 2.03
RAP1B-227ENST00000542018 APBA3O96018 575 aa27.72■■■□□ 2.03
RAP1B-227ENST00000542018 BARGINQ6ZT62 677 aa27.72■■■□□ 2.03
RAP1B-227ENST00000542018 STAC3Q96MF2 364 aa27.72■■■□□ 2.03
RAP1B-227ENST00000542018 USP35Q9P2H5 1018 aa27.72■■■□□ 2.03
RAP1B-227ENST00000542018 NBPF8Q3BBV2 869 aa27.71■■■□□ 2.03
RAP1B-227ENST00000542018 LARP1Q6PKG0 1096 aaKnown RBP27.7■■■□□ 2.02
RAP1B-227ENST00000542018 PARD3Q8TEW0 1356 aa27.7■■■□□ 2.02
RAP1B-227ENST00000542018 PLEKHG3A1L390 1219 aa27.68■■■□□ 2.02
RAP1B-227ENST00000542018 USP19O94966 1318 aa27.67■■■□□ 2.02
RAP1B-227ENST00000542018 CPDO75976 1380 aa27.66■■■□□ 2.02
RAP1B-227ENST00000542018 CCDC61Q9Y6R9 512 aa27.66■■■□□ 2.02
RAP1B-227ENST00000542018 EVA1CP58658 441 aa27.65■■■□□ 2.02
RAP1B-227ENST00000542018 PDE3BQ13370 1112 aa27.64■■■□□ 2.02
RAP1B-227ENST00000542018 TCP11L2Q8N4U5 519 aa27.63■■■□□ 2.01
RAP1B-227ENST00000542018 ABTB2Q8N961 1025 aa27.63■■■□□ 2.01
RAP1B-227ENST00000542018 PARP4Q9UKK3 1724 aaKnown RBP27.62■■■□□ 2.01
RAP1B-227ENST00000542018 KIAA1210Q9ULL0 1709 aa27.61■■■□□ 2.01
RAP1B-227ENST00000542018 COL5A2P05997 1499 aaPredicted RBP27.59■■■□□ 2.01
RAP1B-227ENST00000542018 PEAK1Q9H792 1746 aa27.59■■■□□ 2.01
RAP1B-227ENST00000542018 GCP02774 474 aa27.57■■■□□ 2
RAP1B-227ENST00000542018 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
RAP1B-227ENST00000542018 THRAP3Q9Y2W1 955 aaKnown RBP27.57■■■□□ 2
RAP1B-227ENST00000542018 SBF2Q86WG5 1849 aa27.55■■■□□ 2
RAP1B-227ENST00000542018 PPIP5K1Q6PFW1 1433 aa27.54■■■□□ 2
RAP1B-227ENST00000542018 NBPF14Q5TI25 921 aa27.53■■■□□ 2
RAP1B-227ENST00000542018 NLRP13Q86W25 1043 aa27.53■■■□□ 2
RAP1B-227ENST00000542018 CRB1P82279 1406 aa27.51■■□□□ 1.99
RAP1B-227ENST00000542018 LRRC37A3O60309 1634 aa27.51■■□□□ 1.99
RAP1B-227ENST00000542018 COL18A1P39060 1754 aa27.5■■□□□ 1.99
RAP1B-227ENST00000542018 CABP2Q9NPB3 220 aa27.5■■□□□ 1.99
RAP1B-227ENST00000542018 RGPD3A6NKT7 1758 aaPredicted RBP27.5■■□□□ 1.99
RAP1B-227ENST00000542018 RGPD4Q7Z3J3 1758 aa27.5■■□□□ 1.99
RAP1B-227ENST00000542018 PTF1AQ7RTS3 328 aa27.49■■□□□ 1.99
RAP1B-227ENST00000542018 SLIT3O75094 1523 aa27.49■■□□□ 1.99
RAP1B-227ENST00000542018 SRPK2P78362 688 aaKnown RBP27.48■■□□□ 1.99
RAP1B-227ENST00000542018 KCNQ2O43526 872 aa27.47■■□□□ 1.99
RAP1B-227ENST00000542018 YY1P25490 414 aa27.47■■□□□ 1.99
RAP1B-227ENST00000542018 SPON1Q9HCB6 807 aa27.47■■□□□ 1.99
RAP1B-227ENST00000542018 OVOS2A0A0G2JMS6 1433 aa27.47■■□□□ 1.99
RAP1B-227ENST00000542018 OVOS2A0A0J9YW53 1432 aa27.47■■□□□ 1.99
RAP1B-227ENST00000542018 OVOS2Q6IE36 1432 aa27.47■■□□□ 1.99
RAP1B-227ENST00000542018 AATKQ6ZMQ8 1374 aa27.47■■□□□ 1.99
RAP1B-227ENST00000542018 USP6P35125 1406 aa27.46■■□□□ 1.99
RAP1B-227ENST00000542018 WNK3Q9BYP7 1800 aa27.46■■□□□ 1.99
RAP1B-227ENST00000542018 CASZ1Q86V15 1759 aa27.45■■□□□ 1.99
RAP1B-227ENST00000542018 ANO8Q9HCE9 1232 aaPredicted RBP27.45■■□□□ 1.98
RAP1B-227ENST00000542018 PIK3C2AO00443 1686 aa27.45■■□□□ 1.98
RAP1B-227ENST00000542018 QRICH2Q9H0J4 1663 aa27.45■■□□□ 1.98
RAP1B-227ENST00000542018 BRD4O60885 1362 aaPredicted RBP27.45■■□□□ 1.98
RAP1B-227ENST00000542018 CENPJQ9HC77 1338 aaPredicted RBP27.44■■□□□ 1.98
RAP1B-227ENST00000542018 PLSCR1O15162 318 aa27.43■■□□□ 1.98
RAP1B-227ENST00000542018 CABP1Q9NZU7 370 aa27.43■■□□□ 1.98
RAP1B-227ENST00000542018 AXIN2Q9Y2T1 843 aa27.43■■□□□ 1.98
RAP1B-227ENST00000542018 ZBTB7CA1YPR0 619 aa27.42■■□□□ 1.98
RAP1B-227ENST00000542018 C11orf95C9JLR9 678 aaPredicted RBP27.42■■□□□ 1.98
RAP1B-227ENST00000542018 NLRP6P59044 892 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms