RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 ALS2Q96Q42 1657 aa21.62■■□□□ 1.05
ITM2C-208ENST00000541852 ABCA3Q99758 1704 aa21.61■■□□□ 1.05
ITM2C-208ENST00000541852 A0A0G2JS52 829 aa21.61■■□□□ 1.05
ITM2C-208ENST00000541852 MYT1Q01538 1121 aa21.61■■□□□ 1.05
ITM2C-208ENST00000541852 PRDM11Q9NQV5 511 aa21.61■■□□□ 1.05
ITM2C-208ENST00000541852 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
ITM2C-208ENST00000541852 FAM98CQ17RN3 349 aaKnown RBP21.6■■□□□ 1.05
ITM2C-208ENST00000541852 COL14A1Q05707 1796 aaKnown RBP21.6■■□□□ 1.05
ITM2C-208ENST00000541852 ITSN1Q15811 1721 aa21.6■■□□□ 1.05
ITM2C-208ENST00000541852 BRWD3Q6RI45 1802 aa21.59■■□□□ 1.05
ITM2C-208ENST00000541852 NBPF8Q3BBV2 869 aa21.59■■□□□ 1.05
ITM2C-208ENST00000541852 KIAA1210Q9ULL0 1709 aa21.59■■□□□ 1.05
ITM2C-208ENST00000541852 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.05
ITM2C-208ENST00000541852 POLR3AO14802 1390 aaPredicted RBP21.58■■□□□ 1.04
ITM2C-208ENST00000541852 SPATA31A5Q5VU36 1347 aa21.57■■□□□ 1.04
ITM2C-208ENST00000541852 SPATA31A7Q8IWB4 1347 aa21.57■■□□□ 1.04
ITM2C-208ENST00000541852 ATP7BP35670 1465 aa21.57■■□□□ 1.04
ITM2C-208ENST00000541852 ACEP12821 1306 aa21.56■■□□□ 1.04
ITM2C-208ENST00000541852 BAG6P46379 1132 aa21.56■■□□□ 1.04
ITM2C-208ENST00000541852 NBPF1Q3BBV0 1214 aa21.54■■□□□ 1.04
ITM2C-208ENST00000541852 DEFB132Q7Z7B7 95 aa21.54■■□□□ 1.04
ITM2C-208ENST00000541852 NRAPQ86VF7 1730 aa21.53■■□□□ 1.04
ITM2C-208ENST00000541852 ABTB2Q8N961 1025 aa21.53■■□□□ 1.04
ITM2C-208ENST00000541852 CENPJQ9HC77 1338 aaPredicted RBP21.53■■□□□ 1.04
ITM2C-208ENST00000541852 BRD4O60885 1362 aaPredicted RBP21.52■■□□□ 1.04
ITM2C-208ENST00000541852 KIAA0232Q92628 1395 aa21.52■■□□□ 1.04
ITM2C-208ENST00000541852 EVA1CP58658 441 aa21.52■■□□□ 1.04
ITM2C-208ENST00000541852 SRPK2P78362 688 aaKnown RBP21.52■■□□□ 1.04
ITM2C-208ENST00000541852 ZC3H6P61129 1189 aaKnown RBP21.51■■□□□ 1.03
ITM2C-208ENST00000541852 NLRP13Q86W25 1043 aa21.51■■□□□ 1.03
ITM2C-208ENST00000541852 SPATA31A1Q5TZJ5 1347 aa21.5■■□□□ 1.03
ITM2C-208ENST00000541852 CHRNA2Q15822 529 aa21.48■■□□□ 1.03
ITM2C-208ENST00000541852 NUTM2GQ5VZR2 741 aa21.48■■□□□ 1.03
ITM2C-208ENST00000541852 CRYBG1Q9Y4K1 1723 aa21.48■■□□□ 1.03
ITM2C-208ENST00000541852 FAM196AQ6ZSG2 479 aa21.47■■□□□ 1.03
ITM2C-208ENST00000541852 STRN4Q9NRL3 753 aa21.47■■□□□ 1.03
ITM2C-208ENST00000541852 BARGINQ6ZT62 677 aa21.46■■□□□ 1.03
ITM2C-208ENST00000541852 L3MBTL2Q969R5 705 aa21.45■■□□□ 1.02
ITM2C-208ENST00000541852 CPDO75976 1380 aa21.45■■□□□ 1.02
ITM2C-208ENST00000541852 PPIP5K1Q6PFW1 1433 aa21.45■■□□□ 1.02
ITM2C-208ENST00000541852 GCP02774 474 aa21.44■■□□□ 1.02
ITM2C-208ENST00000541852 CABP2Q9NPB3 220 aa21.44■■□□□ 1.02
ITM2C-208ENST00000541852 THRAP3Q9Y2W1 955 aaKnown RBP21.44■■□□□ 1.02
ITM2C-208ENST00000541852 TOPAZ1Q8N9V7 1692 aa21.44■■□□□ 1.02
ITM2C-208ENST00000541852 PDE3BQ13370 1112 aa21.43■■□□□ 1.02
ITM2C-208ENST00000541852 USP19O94966 1318 aa21.43■■□□□ 1.02
ITM2C-208ENST00000541852 EVC2Q86UK5 1308 aa21.43■■□□□ 1.02
ITM2C-208ENST00000541852 C11orf95C9JLR9 678 aaPredicted RBP21.42■■□□□ 1.02
ITM2C-208ENST00000541852 ZNF692Q9BU19 519 aaPredicted RBP21.42■■□□□ 1.02
ITM2C-208ENST00000541852 CABP1Q9NZU7 370 aa21.42■■□□□ 1.02
ITM2C-208ENST00000541852 PHRF1Q9P1Y6 1649 aaKnown RBP21.41■■□□□ 1.02
ITM2C-208ENST00000541852 TCP11L2Q8N4U5 519 aa21.41■■□□□ 1.02
ITM2C-208ENST00000541852 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
ITM2C-208ENST00000541852 EN1Q05925 392 aaPredicted RBP21.4■■□□□ 1.02
ITM2C-208ENST00000541852 USP35Q9P2H5 1018 aa21.4■■□□□ 1.02
ITM2C-208ENST00000541852 SSH2Q76I76 1423 aa21.39■■□□□ 1.02
ITM2C-208ENST00000541852 RGPD1P0DJD0 1748 aa21.39■■□□□ 1.01
ITM2C-208ENST00000541852 NLRP6P59044 892 aa21.39■■□□□ 1.01
ITM2C-208ENST00000541852 FAM182BQ5T319 152 aa21.39■■□□□ 1.01
ITM2C-208ENST00000541852 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
ITM2C-208ENST00000541852 LARP1Q6PKG0 1096 aaKnown RBP21.37■■□□□ 1.01
ITM2C-208ENST00000541852 TRIM37O94972 964 aa21.36■■□□□ 1.01
ITM2C-208ENST00000541852 PARD3Q8TEW0 1356 aa21.36■■□□□ 1.01
ITM2C-208ENST00000541852 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
ITM2C-208ENST00000541852 NEUROD1Q13562 356 aa21.35■■□□□ 1.01
ITM2C-208ENST00000541852 SIN3AQ96ST3 1273 aa21.35■■□□□ 1.01
ITM2C-208ENST00000541852 USP6P35125 1406 aa21.35■■□□□ 1.01
ITM2C-208ENST00000541852 ROCK2O75116 1388 aaKnown RBP21.34■■□□□ 1.01
ITM2C-208ENST00000541852 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
ITM2C-208ENST00000541852 NRKQ7Z2Y5 1582 aa21.33■■□□□ 1.01
ITM2C-208ENST00000541852 APBA3O96018 575 aa21.33■■□□□ 1.01
ITM2C-208ENST00000541852 CAMKK2Q96RR4 588 aa21.33■■□□□ 1.01
ITM2C-208ENST00000541852 AATKQ6ZMQ8 1374 aa21.33■■□□□ 1
ITM2C-208ENST00000541852 PSDA5PKW4 1024 aaPredicted RBP21.32■■□□□ 1
ITM2C-208ENST00000541852 KCNH5Q8NCM2 988 aa21.32■■□□□ 1
ITM2C-208ENST00000541852 EZH2Q15910 746 aaKnown RBP21.31■■□□□ 1
ITM2C-208ENST00000541852 LMO7Q8WWI1 1683 aa21.3■■□□□ 1
ITM2C-208ENST00000541852 TTC21AQ8NDW8 1320 aa21.29■■□□□ 1
ITM2C-208ENST00000541852 CRB1P82279 1406 aa21.29■■□□□ 1
ITM2C-208ENST00000541852 COL5A2P05997 1499 aaPredicted RBP21.28■■□□□ 1
ITM2C-208ENST00000541852 R3HDM1Q15032 1099 aaKnown RBP21.28■■□□□ 1
ITM2C-208ENST00000541852 NBPF14Q5TI25 921 aa21.28■■□□□ 1
ITM2C-208ENST00000541852 CDCA7Q9BWT1 371 aaPredicted RBP21.28■■□□□ 1
ITM2C-208ENST00000541852 LRP5O75197 1615 aa21.28■■□□□ 1
ITM2C-208ENST00000541852 TRPM1Q7Z4N2 1603 aa21.28■■□□□ 1
ITM2C-208ENST00000541852 TTC21BQ7Z4L5 1316 aa21.28■■□□□ 1
ITM2C-208ENST00000541852 ZBTB7CA1YPR0 619 aa21.27■■□□□ 1
ITM2C-208ENST00000541852 TOM1L2Q6ZVM7 507 aa21.27■■□□□ 1
ITM2C-208ENST00000541852 SLIT3O75094 1523 aa21.25■□□□□ 0.99
ITM2C-208ENST00000541852 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
ITM2C-208ENST00000541852 TNS1Q9HBL0 1735 aaKnown RBP21.25■□□□□ 0.99
ITM2C-208ENST00000541852 DDB1Q16531 1140 aa21.24■□□□□ 0.99
ITM2C-208ENST00000541852 WDR17Q8IZU2 1322 aa21.23■□□□□ 0.99
ITM2C-208ENST00000541852 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
ITM2C-208ENST00000541852 KTN1Q86UP2 1357 aaKnown RBP21.22■□□□□ 0.99
ITM2C-208ENST00000541852 CPSF1Q10570 1443 aaKnown RBP21.21■□□□□ 0.99
ITM2C-208ENST00000541852 SLC24A1O60721 1099 aa21.21■□□□□ 0.99
ITM2C-208ENST00000541852 CARD10Q9BWT7 1032 aa21.21■□□□□ 0.99
ITM2C-208ENST00000541852 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
ITM2C-208ENST00000541852 AXIN2Q9Y2T1 843 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms