RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 FCHSD2O94868 740 aa17.81■□□□□ 0.44
GCFC2-211ENST00000541687 DENND4BO75064 1496 aaPredicted RBP17.81■□□□□ 0.44
GCFC2-211ENST00000541687 SHANK2Q9UPX8 1470 aa17.81■□□□□ 0.44
GCFC2-211ENST00000541687 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
GCFC2-211ENST00000541687 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
GCFC2-211ENST00000541687 INTS3Q68E01 1043 aaKnown RBP17.81■□□□□ 0.44
GCFC2-211ENST00000541687 SEC24BO95487 1268 aa17.81■□□□□ 0.44
GCFC2-211ENST00000541687 TEFQ10587 303 aa17.81■□□□□ 0.44
GCFC2-211ENST00000541687 TBC1D2Q9BYX2 928 aa17.81■□□□□ 0.44
GCFC2-211ENST00000541687 DUOX2Q9NRD8 1548 aa17.8■□□□□ 0.44
GCFC2-211ENST00000541687 KDM5BQ9UGL1 1544 aa17.8■□□□□ 0.44
GCFC2-211ENST00000541687 RTEL1-TNFRSF6BF6WH68 1400 aa17.8■□□□□ 0.44
GCFC2-211ENST00000541687 NUP160Q12769 1436 aa17.8■□□□□ 0.44
GCFC2-211ENST00000541687 ATAD2Q6PL18 1390 aa17.8■□□□□ 0.44
GCFC2-211ENST00000541687 CT47B1P0C2W7 299 aaPredicted RBP17.79■□□□□ 0.44
GCFC2-211ENST00000541687 NFE2L2Q16236 605 aa17.79■□□□□ 0.44
GCFC2-211ENST00000541687 MCM10Q7L590 875 aa17.79■□□□□ 0.44
GCFC2-211ENST00000541687 GCC1Q96CN9 775 aa17.78■□□□□ 0.44
GCFC2-211ENST00000541687 SKOR2Q2VWA4 1001 aaPredicted RBP17.77■□□□□ 0.44
GCFC2-211ENST00000541687 MCM4P33991 863 aa17.77■□□□□ 0.43
GCFC2-211ENST00000541687 FAM83GA6ND36 823 aa17.76■□□□□ 0.43
GCFC2-211ENST00000541687 NUDT16Q96DE0 195 aaKnown RBP17.76■□□□□ 0.43
GCFC2-211ENST00000541687 CEP170Q5SW79 1584 aa17.76■□□□□ 0.43
GCFC2-211ENST00000541687 FYB1O15117 783 aa17.75■□□□□ 0.43
GCFC2-211ENST00000541687 DRC7Q8IY82 874 aa17.75■□□□□ 0.43
GCFC2-211ENST00000541687 C9orf78Q9NZ63 289 aaPredicted RBP17.75■□□□□ 0.43
GCFC2-211ENST00000541687 CHAF1AQ13111 956 aaPredicted RBP17.74■□□□□ 0.43
GCFC2-211ENST00000541687 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
GCFC2-211ENST00000541687 NEK4P51957 841 aa17.74■□□□□ 0.43
GCFC2-211ENST00000541687 SYAP1Q96A49 352 aaPredicted RBP17.74■□□□□ 0.43
GCFC2-211ENST00000541687 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
GCFC2-211ENST00000541687 MBD5Q9P267 1494 aa17.72■□□□□ 0.43
GCFC2-211ENST00000541687 CAVIN1Q6NZI2 390 aaKnown RBP17.72■□□□□ 0.43
GCFC2-211ENST00000541687 GPATCH3Q96I76 525 aa17.72■□□□□ 0.43
GCFC2-211ENST00000541687 DIAPH3Q9NSV4 1193 aa17.72■□□□□ 0.43
GCFC2-211ENST00000541687 PSME1Q06323 249 aa17.71■□□□□ 0.43
GCFC2-211ENST00000541687 ABTB2Q8N961 1025 aa17.71■□□□□ 0.43
GCFC2-211ENST00000541687 RNF214Q8ND24 703 aa17.71■□□□□ 0.43
GCFC2-211ENST00000541687 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
GCFC2-211ENST00000541687 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
GCFC2-211ENST00000541687 MRE11P49959 708 aa17.71■□□□□ 0.43
GCFC2-211ENST00000541687 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.43
GCFC2-211ENST00000541687 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
GCFC2-211ENST00000541687 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.42
GCFC2-211ENST00000541687 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
GCFC2-211ENST00000541687 NUCB2P80303 420 aa17.7■□□□□ 0.42
GCFC2-211ENST00000541687 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
GCFC2-211ENST00000541687 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
GCFC2-211ENST00000541687 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
GCFC2-211ENST00000541687 HSP90B1P14625 803 aaKnown RBP17.69■□□□□ 0.42
GCFC2-211ENST00000541687 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
GCFC2-211ENST00000541687 PIK3C2GO75747 1445 aa17.69■□□□□ 0.42
GCFC2-211ENST00000541687 F6X3S4 739 aa17.69■□□□□ 0.42
GCFC2-211ENST00000541687 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
GCFC2-211ENST00000541687 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
GCFC2-211ENST00000541687 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
GCFC2-211ENST00000541687 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
GCFC2-211ENST00000541687 MAP4K4O95819 1239 aaPredicted RBP17.68■□□□□ 0.42
GCFC2-211ENST00000541687 KDM5CP41229 1560 aa17.68■□□□□ 0.42
GCFC2-211ENST00000541687 NRDCO43847 1150 aa17.67■□□□□ 0.42
GCFC2-211ENST00000541687 ZNF692Q9BU19 519 aaPredicted RBP17.67■□□□□ 0.42
GCFC2-211ENST00000541687 IL1RAPL2Q9NP60 686 aa17.67■□□□□ 0.42
GCFC2-211ENST00000541687 ASXL2Q76L83 1435 aa17.67■□□□□ 0.42
GCFC2-211ENST00000541687 MAGI2Q86UL8 1455 aa17.67■□□□□ 0.42
GCFC2-211ENST00000541687 NASPP49321 788 aaPredicted RBP17.66■□□□□ 0.42
GCFC2-211ENST00000541687 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
GCFC2-211ENST00000541687 MBIPQ9NS73 344 aa17.66■□□□□ 0.42
GCFC2-211ENST00000541687 IFIT2P09913 472 aaKnown RBP17.66■□□□□ 0.42
GCFC2-211ENST00000541687 GNAI2P04899 355 aa17.66■□□□□ 0.42
GCFC2-211ENST00000541687 RABEP1Q15276 862 aa17.66■□□□□ 0.42
GCFC2-211ENST00000541687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.66■□□□□ 0.42
GCFC2-211ENST00000541687 ALDH1L2Q3SY69 923 aa17.65■□□□□ 0.42
GCFC2-211ENST00000541687 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
GCFC2-211ENST00000541687 CCDC30Q5VVM6 783 aa17.65■□□□□ 0.42
GCFC2-211ENST00000541687 TSPYL6Q8N831 410 aa17.65■□□□□ 0.42
GCFC2-211ENST00000541687 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
GCFC2-211ENST00000541687 GNAI3P08754 354 aa17.64■□□□□ 0.42
GCFC2-211ENST00000541687 GORABQ5T7V8 394 aa17.64■□□□□ 0.42
GCFC2-211ENST00000541687 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.42
GCFC2-211ENST00000541687 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.41
GCFC2-211ENST00000541687 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
GCFC2-211ENST00000541687 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
GCFC2-211ENST00000541687 NCKAP5LQ9HCH0 1330 aa17.64■□□□□ 0.41
GCFC2-211ENST00000541687 VPS37CA5D8V6 355 aaPredicted RBP17.64■□□□□ 0.41
GCFC2-211ENST00000541687 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
GCFC2-211ENST00000541687 ABCC11Q96J66 1382 aa17.63■□□□□ 0.41
GCFC2-211ENST00000541687 RBM33Q96EV2 1170 aaKnown RBP17.63■□□□□ 0.41
GCFC2-211ENST00000541687 ZMYM4Q5VZL5 1548 aa17.63■□□□□ 0.41
GCFC2-211ENST00000541687 EIF2AK4Q9P2K8 1649 aaKnown RBP17.63■□□□□ 0.41
GCFC2-211ENST00000541687 GRPEL1Q9HAV7 217 aa17.63■□□□□ 0.41
GCFC2-211ENST00000541687 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
GCFC2-211ENST00000541687 GOLGA6L6A8MZA4 724 aa17.62■□□□□ 0.41
GCFC2-211ENST00000541687 MPNDQ8N594 471 aa17.62■□□□□ 0.41
GCFC2-211ENST00000541687 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
GCFC2-211ENST00000541687 CCDC27Q2M243 656 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 TSHZ3Q63HK5 1081 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 ERC2O15083 957 aa17.61■□□□□ 0.41
GCFC2-211ENST00000541687 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms