RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 EDC4Q6P2E9 1401 aaKnown RBP20.2■□□□□ 0.82
CLPTM1-202ENST00000541297 NKTRP30414 1462 aaKnown RBP20.2■□□□□ 0.82
CLPTM1-202ENST00000541297 NME9Q86XW9 330 aa20.19■□□□□ 0.82
CLPTM1-202ENST00000541297 ACEP12821 1306 aa20.19■□□□□ 0.82
CLPTM1-202ENST00000541297 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
CLPTM1-202ENST00000541297 KDM4FA0A1W2PPD8 638 aa20.19■□□□□ 0.82
CLPTM1-202ENST00000541297 PMFBP1Q8TBY8 1022 aa20.19■□□□□ 0.82
CLPTM1-202ENST00000541297 FBLN1P23142 703 aa20.18■□□□□ 0.82
CLPTM1-202ENST00000541297 ZRANB1Q9UGI0 708 aa20.18■□□□□ 0.82
CLPTM1-202ENST00000541297 HSPA2P54652 639 aa20.18■□□□□ 0.82
CLPTM1-202ENST00000541297 INSRP06213 1382 aa20.17■□□□□ 0.82
CLPTM1-202ENST00000541297 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
CLPTM1-202ENST00000541297 ZNF692Q9BU19 519 aaPredicted RBP20.16■□□□□ 0.82
CLPTM1-202ENST00000541297 MAP2P11137 1827 aaKnown RBP20.15■□□□□ 0.82
CLPTM1-202ENST00000541297 PLEKHG3A1L390 1219 aa20.14■□□□□ 0.82
CLPTM1-202ENST00000541297 FMN2Q9NZ56 1722 aa20.14■□□□□ 0.81
CLPTM1-202ENST00000541297 SMG6Q86US8 1419 aaKnown RBP20.13■□□□□ 0.81
CLPTM1-202ENST00000541297 NUDCQ9Y266 331 aa20.13■□□□□ 0.81
CLPTM1-202ENST00000541297 NRKQ7Z2Y5 1582 aa20.13■□□□□ 0.81
CLPTM1-202ENST00000541297 PPM1GO15355 546 aaPredicted RBP20.12■□□□□ 0.81
CLPTM1-202ENST00000541297 C14orf37Q86TY3 774 aa20.12■□□□□ 0.81
CLPTM1-202ENST00000541297 DEKP35659 375 aaKnown RBP20.11■□□□□ 0.81
CLPTM1-202ENST00000541297 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
CLPTM1-202ENST00000541297 USP6P35125 1406 aa20.11■□□□□ 0.81
CLPTM1-202ENST00000541297 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
CLPTM1-202ENST00000541297 COG3Q96JB2 828 aa20.11■□□□□ 0.81
CLPTM1-202ENST00000541297 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
CLPTM1-202ENST00000541297 APAF1O14727 1248 aa20.1■□□□□ 0.81
CLPTM1-202ENST00000541297 NOP58Q9Y2X3 529 aaKnown RBP20.09■□□□□ 0.81
CLPTM1-202ENST00000541297 POLKQ9UBT6 870 aa20.08■□□□□ 0.8
CLPTM1-202ENST00000541297 NWD1Q149M9 1564 aa20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 ADGRL3Q9HAR2 1447 aa20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 U2AF1L5P0DN76 240 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 U2AF1Q01081 240 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 EMILIN1Q9Y6C2 1016 aa20.07■□□□□ 0.8
CLPTM1-202ENST00000541297 PROSER2Q86WR7 435 aaPredicted RBP20.06■□□□□ 0.8
CLPTM1-202ENST00000541297 RRS1Q15050 365 aaKnown RBP20.05■□□□□ 0.8
CLPTM1-202ENST00000541297 LMTK3Q96Q04 1460 aa20.04■□□□□ 0.8
CLPTM1-202ENST00000541297 PDE3BQ13370 1112 aa20.04■□□□□ 0.8
CLPTM1-202ENST00000541297 NBR1Q14596 966 aa20.04■□□□□ 0.8
CLPTM1-202ENST00000541297 STRCP1A6NGW2 1772 aa20.04■□□□□ 0.8
CLPTM1-202ENST00000541297 SOX12O15370 315 aa20.04■□□□□ 0.8
CLPTM1-202ENST00000541297 SSH2Q76I76 1423 aa20.03■□□□□ 0.8
CLPTM1-202ENST00000541297 NEUROD2Q15784 382 aa20.03■□□□□ 0.8
CLPTM1-202ENST00000541297 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
CLPTM1-202ENST00000541297 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.8
CLPTM1-202ENST00000541297 PNPLA6Q8IY17 1366 aa20.02■□□□□ 0.8
CLPTM1-202ENST00000541297 RUNDC1Q96C34 613 aa20.02■□□□□ 0.79
CLPTM1-202ENST00000541297 ESCO1Q5FWF5 840 aa20.01■□□□□ 0.79
CLPTM1-202ENST00000541297 CCDC136Q96JN2 1154 aa20.01■□□□□ 0.79
CLPTM1-202ENST00000541297 PHF8Q9UPP1 1060 aa20.01■□□□□ 0.79
CLPTM1-202ENST00000541297 OVOS2A0A0J9YW53 1432 aa20.01■□□□□ 0.79
CLPTM1-202ENST00000541297 OVOS2Q6IE36 1432 aa20.01■□□□□ 0.79
CLPTM1-202ENST00000541297 ZNF521Q96K83 1311 aa20■□□□□ 0.79
CLPTM1-202ENST00000541297 PIK3C2AO00443 1686 aa19.99■□□□□ 0.79
CLPTM1-202ENST00000541297 TCP11L2Q8N4U5 519 aa19.99■□□□□ 0.79
CLPTM1-202ENST00000541297 AATKQ6ZMQ8 1374 aa19.99■□□□□ 0.79
CLPTM1-202ENST00000541297 STRCQ7RTU9 1775 aa19.99■□□□□ 0.79
CLPTM1-202ENST00000541297 RNF123Q5XPI4 1314 aa19.99■□□□□ 0.79
CLPTM1-202ENST00000541297 NUTM2GQ5VZR2 741 aa19.99■□□□□ 0.79
CLPTM1-202ENST00000541297 TTC21AQ8NDW8 1320 aa19.99■□□□□ 0.79
CLPTM1-202ENST00000541297 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
CLPTM1-202ENST00000541297 ORAI2Q96SN7 254 aa19.96■□□□□ 0.79
CLPTM1-202ENST00000541297 IQSEC2Q5JU85 1478 aa19.96■□□□□ 0.79
CLPTM1-202ENST00000541297 CDK12Q9NYV4 1490 aaPredicted RBP19.96■□□□□ 0.79
CLPTM1-202ENST00000541297 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
CLPTM1-202ENST00000541297 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
CLPTM1-202ENST00000541297 TMEM94Q12767 1356 aa19.95■□□□□ 0.78
CLPTM1-202ENST00000541297 NLRP6P59044 892 aa19.95■□□□□ 0.78
CLPTM1-202ENST00000541297 ANP32AP39687 249 aaKnown RBP19.94■□□□□ 0.78
CLPTM1-202ENST00000541297 ABTB2Q8N961 1025 aa19.94■□□□□ 0.78
CLPTM1-202ENST00000541297 IPO9Q96P70 1041 aaKnown RBP19.94■□□□□ 0.78
CLPTM1-202ENST00000541297 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
CLPTM1-202ENST00000541297 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
CLPTM1-202ENST00000541297 C19orf44Q9H6X5 657 aa19.93■□□□□ 0.78
CLPTM1-202ENST00000541297 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
CLPTM1-202ENST00000541297 HMOX1P09601 288 aa19.93■□□□□ 0.78
CLPTM1-202ENST00000541297 PSME1Q06323 249 aa19.93■□□□□ 0.78
CLPTM1-202ENST00000541297 PEAK1Q9H792 1746 aa19.92■□□□□ 0.78
CLPTM1-202ENST00000541297 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
CLPTM1-202ENST00000541297 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
CLPTM1-202ENST00000541297 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
CLPTM1-202ENST00000541297 MARF1Q9Y4F3 1742 aaKnown RBP19.92■□□□□ 0.78
CLPTM1-202ENST00000541297 IL13P35225 146 aa19.92■□□□□ 0.78
CLPTM1-202ENST00000541297 FOXO3O43524 673 aa19.91■□□□□ 0.78
CLPTM1-202ENST00000541297 SLFN5Q08AF3 891 aa19.91■□□□□ 0.78
CLPTM1-202ENST00000541297 LRRC7Q96NW7 1537 aa19.91■□□□□ 0.78
CLPTM1-202ENST00000541297 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
CLPTM1-202ENST00000541297 NGEFQ8N5V2 710 aa19.89■□□□□ 0.78
CLPTM1-202ENST00000541297 HSP90AB2PQ58FF8 381 aa19.89■□□□□ 0.77
CLPTM1-202ENST00000541297 ATF3P18847 181 aa19.89■□□□□ 0.77
CLPTM1-202ENST00000541297 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
CLPTM1-202ENST00000541297 MAP3K19Q56UN5 1328 aa19.88■□□□□ 0.77
CLPTM1-202ENST00000541297 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
CLPTM1-202ENST00000541297 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
CLPTM1-202ENST00000541297 C1orf167Q5SNV9 1468 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms