RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
LTBR-209ENST00000541102 EVC2Q86UK5 1308 aa20.2■□□□□ 0.82
LTBR-209ENST00000541102 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
LTBR-209ENST00000541102 CABP1Q9NZU7 370 aa20.19■□□□□ 0.82
LTBR-209ENST00000541102 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
LTBR-209ENST00000541102 RGS12O14924 1447 aa20.19■□□□□ 0.82
LTBR-209ENST00000541102 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
LTBR-209ENST00000541102 GJD4Q96KN9 370 aaPredicted RBP20.17■□□□□ 0.82
LTBR-209ENST00000541102 SLIT2O94813 1529 aa20.17■□□□□ 0.82
LTBR-209ENST00000541102 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
LTBR-209ENST00000541102 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
LTBR-209ENST00000541102 TOPAZ1Q8N9V7 1692 aa20.16■□□□□ 0.82
LTBR-209ENST00000541102 ABTB2Q8N961 1025 aa20.15■□□□□ 0.82
LTBR-209ENST00000541102 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.821e-10■■■■■ 41
LTBR-209ENST00000541102 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
LTBR-209ENST00000541102 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
LTBR-209ENST00000541102 RALGAPBQ86X10 1494 aa20.12■□□□□ 0.81
LTBR-209ENST00000541102 PRDM11Q9NQV5 511 aa20.12■□□□□ 0.81
LTBR-209ENST00000541102 BTG4Q9NY30 223 aa20.12■□□□□ 0.81
LTBR-209ENST00000541102 ZC3H6P61129 1189 aaKnown RBP20.11■□□□□ 0.81
LTBR-209ENST00000541102 VPS72Q15906 364 aa20.11■□□□□ 0.81
LTBR-209ENST00000541102 CHRNA2Q15822 529 aa20.09■□□□□ 0.81
LTBR-209ENST00000541102 PLCH1Q4KWH8 1693 aa20.08■□□□□ 0.81
LTBR-209ENST00000541102 NLRP13Q86W25 1043 aa20.08■□□□□ 0.81
LTBR-209ENST00000541102 KIAA0232Q92628 1395 aa20.08■□□□□ 0.8
LTBR-209ENST00000541102 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.07■□□□□ 0.8
LTBR-209ENST00000541102 USP6P35125 1406 aa20.06■□□□□ 0.8
LTBR-209ENST00000541102 NLRP6P59044 892 aa20.06■□□□□ 0.8
LTBR-209ENST00000541102 NWD2Q9ULI1 1742 aa20.05■□□□□ 0.8
LTBR-209ENST00000541102 GLI3P10071 1580 aa20.05■□□□□ 0.8
LTBR-209ENST00000541102 TMC1Q8TDI8 760 aa20.05■□□□□ 0.8
LTBR-209ENST00000541102 ZNF692Q9BU19 519 aaPredicted RBP20.05■□□□□ 0.8
LTBR-209ENST00000541102 BRD4O60885 1362 aaPredicted RBP20.05■□□□□ 0.8
LTBR-209ENST00000541102 ATAD2Q6PL18 1390 aa20.05■□□□□ 0.8
LTBR-209ENST00000541102 COL14A1Q05707 1796 aaKnown RBP20.04■□□□□ 0.8
LTBR-209ENST00000541102 ST20-MTHFSA0A0A6YYL1 179 aa20.04■□□□□ 0.8
LTBR-209ENST00000541102 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
LTBR-209ENST00000541102 SBNO2Q9Y2G9 1366 aa20.04■□□□□ 0.8
LTBR-209ENST00000541102 CRYBG1Q9Y4K1 1723 aa20.04■□□□□ 0.8
LTBR-209ENST00000541102 A0A0G2JS52 829 aa20.03■□□□□ 0.8
LTBR-209ENST00000541102 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
LTBR-209ENST00000541102 GCP02774 474 aa20.03■□□□□ 0.8
LTBR-209ENST00000541102 MYT1Q01538 1121 aa20.03■□□□□ 0.8
LTBR-209ENST00000541102 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
LTBR-209ENST00000541102 USP19O94966 1318 aa20.02■□□□□ 0.79
LTBR-209ENST00000541102 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.79
LTBR-209ENST00000541102 EVA1CP58658 441 aa20.01■□□□□ 0.79
LTBR-209ENST00000541102 FAM98CQ17RN3 349 aaKnown RBP20.01■□□□□ 0.79
LTBR-209ENST00000541102 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
LTBR-209ENST00000541102 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
LTBR-209ENST00000541102 ONECUT3O60422 494 aaPredicted RBP19.99■□□□□ 0.79
LTBR-209ENST00000541102 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
LTBR-209ENST00000541102 SSH2Q76I76 1423 aa19.99■□□□□ 0.79
LTBR-209ENST00000541102 SPATA31A5Q5VU36 1347 aa19.99■□□□□ 0.79
LTBR-209ENST00000541102 SPATA31A7Q8IWB4 1347 aa19.99■□□□□ 0.79
LTBR-209ENST00000541102 NRAPQ86VF7 1730 aa19.99■□□□□ 0.79
LTBR-209ENST00000541102 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.98■□□□□ 0.79
LTBR-209ENST00000541102 TESK2Q96S53 571 aa19.98■□□□□ 0.79
LTBR-209ENST00000541102 CPSF1Q10570 1443 aaKnown RBP19.97■□□□□ 0.79
LTBR-209ENST00000541102 SOX12O15370 315 aa19.97■□□□□ 0.79
LTBR-209ENST00000541102 NRKQ7Z2Y5 1582 aa19.96■□□□□ 0.79
LTBR-209ENST00000541102 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
LTBR-209ENST00000541102 USP35Q9P2H5 1018 aa19.96■□□□□ 0.79
LTBR-209ENST00000541102 TTC21AQ8NDW8 1320 aa19.96■□□□□ 0.79
LTBR-209ENST00000541102 CPDO75976 1380 aa19.95■□□□□ 0.79
LTBR-209ENST00000541102 KRT27Q7Z3Y8 459 aa19.95■□□□□ 0.78
LTBR-209ENST00000541102 USP47Q96K76 1375 aa19.95■□□□□ 0.78
LTBR-209ENST00000541102 AKAP12Q02952 1782 aa19.94■□□□□ 0.78
LTBR-209ENST00000541102 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
LTBR-209ENST00000541102 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
LTBR-209ENST00000541102 ZRANB1Q9UGI0 708 aa19.94■□□□□ 0.78
LTBR-209ENST00000541102 SPATA31A1Q5TZJ5 1347 aa19.94■□□□□ 0.78
LTBR-209ENST00000541102 BRWD3Q6RI45 1802 aa19.93■□□□□ 0.78
LTBR-209ENST00000541102 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
LTBR-209ENST00000541102 LARP1Q6PKG0 1096 aaKnown RBP19.93■□□□□ 0.78
LTBR-209ENST00000541102 PIK3C2AO00443 1686 aa19.92■□□□□ 0.78
LTBR-209ENST00000541102 CAMTA1Q9Y6Y1 1673 aa19.92■□□□□ 0.78
LTBR-209ENST00000541102 NME9Q86XW9 330 aa19.91■□□□□ 0.78
LTBR-209ENST00000541102 KCNH5Q8NCM2 988 aa19.91■□□□□ 0.78
LTBR-209ENST00000541102 CD163L1Q9NR16 1453 aa19.91■□□□□ 0.78
LTBR-209ENST00000541102 TMF1P82094 1093 aa19.9■□□□□ 0.78
LTBR-209ENST00000541102 CCDC125Q86Z20 511 aa19.9■□□□□ 0.78
LTBR-209ENST00000541102 SLIT3O75094 1523 aa19.9■□□□□ 0.78
LTBR-209ENST00000541102 AATKQ6ZMQ8 1374 aa19.88■□□□□ 0.77
LTBR-209ENST00000541102 FAM182BQ5T319 152 aa19.88■□□□□ 0.77
LTBR-209ENST00000541102 A0A1W2PP64 1363 aa19.87■□□□□ 0.77
LTBR-209ENST00000541102 ARHGEF25Q86VW2 580 aa19.87■□□□□ 0.77
LTBR-209ENST00000541102 TCP11L2Q8N4U5 519 aa19.87■□□□□ 0.77
LTBR-209ENST00000541102 MON2Q7Z3U7 1717 aa19.87■□□□□ 0.77
LTBR-209ENST00000541102 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
LTBR-209ENST00000541102 SF3B2Q13435 895 aaKnown RBP19.86■□□□□ 0.77
LTBR-209ENST00000541102 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
LTBR-209ENST00000541102 LMO7Q8WWI1 1683 aa19.86■□□□□ 0.77
LTBR-209ENST00000541102 COL5A2P05997 1499 aaPredicted RBP19.85■□□□□ 0.77
LTBR-209ENST00000541102 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
LTBR-209ENST00000541102 USP31Q70CQ4 1352 aa19.84■□□□□ 0.77
LTBR-209ENST00000541102 BARGINQ6ZT62 677 aa19.84■□□□□ 0.77
LTBR-209ENST00000541102 TOM1L2Q6ZVM7 507 aa19.84■□□□□ 0.77
LTBR-209ENST00000541102 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
LTBR-209ENST00000541102 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms