RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 NGLY1Q96IV0 654 aa12.68□□□□□ -0.38
PXN-209ENST00000540221 USP6P35125 1406 aa12.68□□□□□ -0.38
PXN-209ENST00000540221 TTC21AQ8NDW8 1320 aa12.67□□□□□ -0.38
PXN-209ENST00000540221 ADAMTS2O95450 1211 aa12.67□□□□□ -0.38
PXN-209ENST00000540221 NLRP13Q86W25 1043 aa12.67□□□□□ -0.38
PXN-209ENST00000540221 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
PXN-209ENST00000540221 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
PXN-209ENST00000540221 C8orf37Q96NL8 207 aa12.67□□□□□ -0.38
PXN-209ENST00000540221 CPSF1Q10570 1443 aaKnown RBP12.67□□□□□ -0.38
PXN-209ENST00000540221 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
PXN-209ENST00000540221 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
PXN-209ENST00000540221 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
PXN-209ENST00000540221 AFF2P51816 1311 aa12.65□□□□□ -0.38
PXN-209ENST00000540221 RGS17Q9UGC6 210 aaPredicted RBP12.65□□□□□ -0.38
PXN-209ENST00000540221 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
PXN-209ENST00000540221 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
PXN-209ENST00000540221 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
PXN-209ENST00000540221 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
PXN-209ENST00000540221 SLC12A5Q9H2X9 1139 aa12.63□□□□□ -0.39
PXN-209ENST00000540221 USP21Q9UK80 565 aa12.63□□□□□ -0.39
PXN-209ENST00000540221 USP19O94966 1318 aa12.62□□□□□ -0.39
PXN-209ENST00000540221 EDC4Q6P2E9 1401 aaKnown RBP12.62□□□□□ -0.39
PXN-209ENST00000540221 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
PXN-209ENST00000540221 HSPA5P11021 654 aaKnown RBP12.62□□□□□ -0.39
PXN-209ENST00000540221 NLRP6P59044 892 aa12.62□□□□□ -0.39
PXN-209ENST00000540221 TRPC5Q9UL62 973 aaPredicted RBP12.62□□□□□ -0.39
PXN-209ENST00000540221 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
PXN-209ENST00000540221 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
PXN-209ENST00000540221 RXRBP28702 533 aa12.6□□□□□ -0.39
PXN-209ENST00000540221 POTEAQ6S8J7 498 aa12.6□□□□□ -0.39
PXN-209ENST00000540221 UNC5CLQ8IV45 518 aa12.6□□□□□ -0.39
PXN-209ENST00000540221 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
PXN-209ENST00000540221 A0A1W2PP64 1363 aa12.59□□□□□ -0.39
PXN-209ENST00000540221 CPDO75976 1380 aa12.59□□□□□ -0.39
PXN-209ENST00000540221 SLIT2O94813 1529 aa12.59□□□□□ -0.39
PXN-209ENST00000540221 GCP02774 474 aa12.59□□□□□ -0.39
PXN-209ENST00000540221 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
PXN-209ENST00000540221 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
PXN-209ENST00000540221 USP31Q70CQ4 1352 aa12.58□□□□□ -0.4
PXN-209ENST00000540221 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
PXN-209ENST00000540221 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
PXN-209ENST00000540221 BCL9LQ86UU0 1499 aa12.58□□□□□ -0.4
PXN-209ENST00000540221 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
PXN-209ENST00000540221 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
PXN-209ENST00000540221 ILDR2Q71H61 639 aa12.57□□□□□ -0.4
PXN-209ENST00000540221 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
PXN-209ENST00000540221 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
PXN-209ENST00000540221 ATRNO75882 1429 aa12.56□□□□□ -0.4
PXN-209ENST00000540221 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
PXN-209ENST00000540221 VPS72Q15906 364 aa12.56□□□□□ -0.4
PXN-209ENST00000540221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.56□□□□□ -0.4
PXN-209ENST00000540221 MARF1Q9Y4F3 1742 aaKnown RBP12.55□□□□□ -0.4
PXN-209ENST00000540221 GJD4Q96KN9 370 aaPredicted RBP12.55□□□□□ -0.4
PXN-209ENST00000540221 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
PXN-209ENST00000540221 SLIT3O75094 1523 aa12.55□□□□□ -0.4
PXN-209ENST00000540221 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
PXN-209ENST00000540221 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
PXN-209ENST00000540221 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
PXN-209ENST00000540221 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
PXN-209ENST00000540221 ZEB1P37275 1124 aaPredicted RBP12.54□□□□□ -0.4
PXN-209ENST00000540221 COG3Q96JB2 828 aa12.54□□□□□ -0.4
PXN-209ENST00000540221 AATKQ6ZMQ8 1374 aa12.54□□□□□ -0.4
PXN-209ENST00000540221 PHRF1Q9P1Y6 1649 aaKnown RBP12.53□□□□□ -0.4
PXN-209ENST00000540221 SOCS7O14512 581 aa12.53□□□□□ -0.4
PXN-209ENST00000540221 NME9Q86XW9 330 aa12.53□□□□□ -0.4
PXN-209ENST00000540221 PIK3C2AO00443 1686 aa12.53□□□□□ -0.4
PXN-209ENST00000540221 NWD2Q9ULI1 1742 aa12.53□□□□□ -0.4
PXN-209ENST00000540221 CRYBG1Q9Y4K1 1723 aa12.53□□□□□ -0.4
PXN-209ENST00000540221 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.41
PXN-209ENST00000540221 EVA1CP58658 441 aa12.52□□□□□ -0.41
PXN-209ENST00000540221 ARHGEF25Q86VW2 580 aa12.52□□□□□ -0.41
PXN-209ENST00000540221 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
PXN-209ENST00000540221 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
PXN-209ENST00000540221 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
PXN-209ENST00000540221 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
PXN-209ENST00000540221 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
PXN-209ENST00000540221 FYB1O15117 783 aa12.5□□□□□ -0.41
PXN-209ENST00000540221 CHRNA2Q15822 529 aa12.5□□□□□ -0.41
PXN-209ENST00000540221 ABCC6O95255 1503 aa12.5□□□□□ -0.41
PXN-209ENST00000540221 USP54Q70EL1 1684 aa12.49□□□□□ -0.41
PXN-209ENST00000540221 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
PXN-209ENST00000540221 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
PXN-209ENST00000540221 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
PXN-209ENST00000540221 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
PXN-209ENST00000540221 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
PXN-209ENST00000540221 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
PXN-209ENST00000540221 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
PXN-209ENST00000540221 PANK3Q9H999 370 aa12.48□□□□□ -0.41
PXN-209ENST00000540221 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
PXN-209ENST00000540221 NFAT5O94916 1531 aa12.47□□□□□ -0.41
PXN-209ENST00000540221 NSD2O96028 1365 aa12.47□□□□□ -0.41
PXN-209ENST00000540221 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
PXN-209ENST00000540221 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
PXN-209ENST00000540221 SOX12O15370 315 aa12.47□□□□□ -0.41
PXN-209ENST00000540221 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
PXN-209ENST00000540221 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
PXN-209ENST00000540221 RGS12O14924 1447 aa12.46□□□□□ -0.41
PXN-209ENST00000540221 KIF24Q5T7B8 1368 aa12.46□□□□□ -0.41
PXN-209ENST00000540221 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
PXN-209ENST00000540221 MYOM1P52179 1685 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms