RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
MRE11-209ENST00000540013 ZC3H4Q9UPT8 1303 aaKnown RBP10.12□□□□□ -0.79
MRE11-209ENST00000540013 CD2BP2O95400 341 aaKnown RBP10.12□□□□□ -0.79
MRE11-209ENST00000540013 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
MRE11-209ENST00000540013 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
MRE11-209ENST00000540013 UNC93B1Q9H1C4 597 aa10.12□□□□□ -0.79
MRE11-209ENST00000540013 NBPF14Q5TI25 921 aa10.11□□□□□ -0.79
MRE11-209ENST00000540013 SNRKQ9NRH2 765 aa10.11□□□□□ -0.79
MRE11-209ENST00000540013 MAP10Q9P2G4 905 aa10.11□□□□□ -0.79
MRE11-209ENST00000540013 NDUFB9Q9Y6M9 179 aa10.11□□□□□ -0.79
MRE11-209ENST00000540013 V9GY48 417 aaPredicted RBP10.11□□□□□ -0.79
MRE11-209ENST00000540013 RAD21O60216 631 aa10.09□□□□□ -0.79
MRE11-209ENST00000540013 SLC19A1P41440 591 aa10.09□□□□□ -0.79
MRE11-209ENST00000540013 NR6A1Q15406 480 aa10.09□□□□□ -0.79
MRE11-209ENST00000540013 HMX1Q9NP08 348 aaPredicted RBP10.09□□□□□ -0.79
MRE11-209ENST00000540013 TRIM32Q13049 653 aa10.08□□□□□ -0.8
MRE11-209ENST00000540013 GJD4Q96KN9 370 aaPredicted RBP10.08□□□□□ -0.8
MRE11-209ENST00000540013 FKBPLQ9UIM3 349 aa10.08□□□□□ -0.8
MRE11-209ENST00000540013 GFRA3O60609 400 aa10.07□□□□□ -0.8
MRE11-209ENST00000540013 WNT7BP56706 349 aa10.07□□□□□ -0.8
MRE11-209ENST00000540013 PLA2G2CQ5R387 149 aa10.07□□□□□ -0.8
MRE11-209ENST00000540013 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
MRE11-209ENST00000540013 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
MRE11-209ENST00000540013 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
MRE11-209ENST00000540013 PRKD2Q9BZL6 878 aa10.06□□□□□ -0.8
MRE11-209ENST00000540013 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
MRE11-209ENST00000540013 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
MRE11-209ENST00000540013 GPSM3Q9Y4H4 160 aa10.04□□□□□ -0.8
MRE11-209ENST00000540013 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
MRE11-209ENST00000540013 ZNF511Q8NB15 262 aa10.03□□□□□ -0.8
MRE11-209ENST00000540013 PTK2Q05397 1052 aa10.02□□□□□ -0.81
MRE11-209ENST00000540013 ZNF787Q6DD87 383 aa10.02□□□□□ -0.81
MRE11-209ENST00000540013 ZNF598Q86UK7 904 aaKnown RBP10.02□□□□□ -0.81
MRE11-209ENST00000540013 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
MRE11-209ENST00000540013 EPS8L1Q8TE68 723 aa10.02□□□□□ -0.81
MRE11-209ENST00000540013 BAP1Q92560 729 aa10.02□□□□□ -0.81
MRE11-209ENST00000540013 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
MRE11-209ENST00000540013 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
MRE11-209ENST00000540013 AGERQ15109 404 aa10□□□□□ -0.81
MRE11-209ENST00000540013 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
MRE11-209ENST00000540013 TBC1D2BQ9UPU7 963 aa10□□□□□ -0.81
MRE11-209ENST00000540013 COG6Q9Y2V7 657 aa10□□□□□ -0.81
MRE11-209ENST00000540013 ZNF330Q9Y3S2 320 aaPredicted RBP10□□□□□ -0.81
MRE11-209ENST00000540013 SH3BP2P78314 561 aa9.99□□□□□ -0.81
MRE11-209ENST00000540013 WASHC4Q2M389 1173 aa9.99□□□□□ -0.81
MRE11-209ENST00000540013 LINC01559Q495D7 138 aa9.99□□□□□ -0.81
MRE11-209ENST00000540013 ZNF697Q5TEC3 545 aa9.99□□□□□ -0.81
MRE11-209ENST00000540013 EMID1Q96A84 441 aaPredicted RBP9.99□□□□□ -0.81
MRE11-209ENST00000540013 GDPD2Q9HCC8 539 aa9.99□□□□□ -0.81
MRE11-209ENST00000540013 ABL2P42684 1182 aa9.98□□□□□ -0.81
MRE11-209ENST00000540013 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
MRE11-209ENST00000540013 ZBBXA8MT70 800 aa9.97□□□□□ -0.81
MRE11-209ENST00000540013 WNT7AO00755 349 aa9.97□□□□□ -0.81
MRE11-209ENST00000540013 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
MRE11-209ENST00000540013 SH3BP5LQ7L8J4 393 aa9.97□□□□□ -0.81
MRE11-209ENST00000540013 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
MRE11-209ENST00000540013 A6NJR5 290 aa9.96□□□□□ -0.82
MRE11-209ENST00000540013 ZBTB33Q86T24 672 aa9.96□□□□□ -0.82
MRE11-209ENST00000540013 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.82
MRE11-209ENST00000540013 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
MRE11-209ENST00000540013 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
MRE11-209ENST00000540013 SH3RF1Q7Z6J0 888 aa9.95□□□□□ -0.82
MRE11-209ENST00000540013 FAM174AQ8TBP5 190 aa9.95□□□□□ -0.82
MRE11-209ENST00000540013 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
MRE11-209ENST00000540013 SKOR1P84550 965 aa9.94□□□□□ -0.82
MRE11-209ENST00000540013 NR1H3Q13133 447 aa9.94□□□□□ -0.82
MRE11-209ENST00000540013 MAGEB6P1A0A0J9YX57 407 aa9.93□□□□□ -0.82
MRE11-209ENST00000540013 PROSER2Q86WR7 435 aaPredicted RBP9.93□□□□□ -0.82
MRE11-209ENST00000540013 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
MRE11-209ENST00000540013 CDV3Q9UKY7 258 aaKnown RBP9.93□□□□□ -0.82
MRE11-209ENST00000540013 GPR37L1O60883 481 aa9.92□□□□□ -0.82
MRE11-209ENST00000540013 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
MRE11-209ENST00000540013 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 SOX11P35716 441 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.82
MRE11-209ENST00000540013 PRR20EP86478 221 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 PRR20CP86479 221 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 PRR20DP86480 221 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 PRR20BP86481 221 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 PRR20AP86496 221 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 TRMT44Q8IYL2 757 aaKnown RBP9.91□□□□□ -0.82
MRE11-209ENST00000540013 MPNDQ8N594 471 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 CLUAP1Q96AJ1 413 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 SLC10A4Q96EP9 437 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 CARD14Q9BXL6 1004 aa9.91□□□□□ -0.82
MRE11-209ENST00000540013 FBXO45P0C2W1 286 aa9.9□□□□□ -0.82
MRE11-209ENST00000540013 FOXC1Q12948 553 aa9.9□□□□□ -0.82
MRE11-209ENST00000540013 IRF5Q13568 498 aa9.9□□□□□ -0.82
MRE11-209ENST00000540013 ADAM32Q8TC27 787 aa9.9□□□□□ -0.82
MRE11-209ENST00000540013 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
MRE11-209ENST00000540013 RB1CC1Q8TDY2 1594 aa9.89□□□□□ -0.83
MRE11-209ENST00000540013 MRGPRX2Q96LB1 330 aa9.89□□□□□ -0.83
MRE11-209ENST00000540013 NBPF20Q3BBV1 942 aa9.88□□□□□ -0.83
MRE11-209ENST00000540013 ERFEQ4G0M1 354 aa9.88□□□□□ -0.83
MRE11-209ENST00000540013 DZIP3Q86Y13 1208 aaKnown RBP9.88□□□□□ -0.83
MRE11-209ENST00000540013 CYP4X1Q8N118 509 aa9.88□□□□□ -0.83
MRE11-209ENST00000540013 SNIP1Q8TAD8 396 aaKnown RBP9.88□□□□□ -0.83
MRE11-209ENST00000540013 PKD2L1Q9P0L9 805 aa9.88□□□□□ -0.83
MRE11-209ENST00000540013 MAP4K5Q9Y4K4 846 aa9.88□□□□□ -0.83
MRE11-209ENST00000540013 GDF9O60383 454 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms