RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 IGSF3O75054 1194 aa16.58■□□□□ 0.24
DDX55-206ENST00000539934 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
DDX55-206ENST00000539934 MST1RQ04912 1400 aa16.57■□□□□ 0.24
DDX55-206ENST00000539934 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
DDX55-206ENST00000539934 TRPM2O94759 1503 aa16.57■□□□□ 0.24
DDX55-206ENST00000539934 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
DDX55-206ENST00000539934 NBR1Q14596 966 aa16.56■□□□□ 0.24
DDX55-206ENST00000539934 METP08581 1390 aa16.56■□□□□ 0.24
DDX55-206ENST00000539934 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
DDX55-206ENST00000539934 USP47Q96K76 1375 aa16.56■□□□□ 0.24
DDX55-206ENST00000539934 ANP32CO43423 234 aa16.55■□□□□ 0.24
DDX55-206ENST00000539934 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
DDX55-206ENST00000539934 PPM1GO15355 546 aaPredicted RBP16.54■□□□□ 0.24
DDX55-206ENST00000539934 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
DDX55-206ENST00000539934 USP21Q9UK80 565 aa16.54■□□□□ 0.24
DDX55-206ENST00000539934 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
DDX55-206ENST00000539934 ARID3AQ99856 593 aa16.53■□□□□ 0.24
DDX55-206ENST00000539934 PIK3R4Q99570 1358 aa16.53■□□□□ 0.24
DDX55-206ENST00000539934 TRPM1Q7Z4N2 1603 aa16.53■□□□□ 0.24
DDX55-206ENST00000539934 CCDC7Q96M83 1385 aa16.53■□□□□ 0.24
DDX55-206ENST00000539934 PRAG1Q86YV5 1406 aa16.52■□□□□ 0.24
DDX55-206ENST00000539934 CLTCL1P53675 1640 aa16.52■□□□□ 0.23
DDX55-206ENST00000539934 NHSL1Q5SYE7 1610 aa16.51■□□□□ 0.23
DDX55-206ENST00000539934 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
DDX55-206ENST00000539934 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
DDX55-206ENST00000539934 SETBP1Q9Y6X0 1596 aa16.5■□□□□ 0.23
DDX55-206ENST00000539934 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
DDX55-206ENST00000539934 NRXN3Q9Y4C0 1643 aa16.5■□□□□ 0.23
DDX55-206ENST00000539934 DCCP43146 1447 aa16.48■□□□□ 0.23
DDX55-206ENST00000539934 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
DDX55-206ENST00000539934 CLSTN1O94985 981 aa16.48■□□□□ 0.23
DDX55-206ENST00000539934 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
DDX55-206ENST00000539934 XPCQ01831 940 aaPredicted RBP16.48■□□□□ 0.23
DDX55-206ENST00000539934 KIF7Q2M1P5 1343 aa16.48■□□□□ 0.23
DDX55-206ENST00000539934 XRN1Q8IZH2 1706 aaKnown RBP16.47■□□□□ 0.23
DDX55-206ENST00000539934 KIF1BO60333 1816 aa16.47■□□□□ 0.23
DDX55-206ENST00000539934 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
DDX55-206ENST00000539934 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
DDX55-206ENST00000539934 NALCNQ8IZF0 1738 aa16.46■□□□□ 0.23
DDX55-206ENST00000539934 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
DDX55-206ENST00000539934 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
DDX55-206ENST00000539934 TRPC5Q9UL62 973 aaPredicted RBP16.46■□□□□ 0.23
DDX55-206ENST00000539934 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
DDX55-206ENST00000539934 RGS3P49796 1198 aa16.45■□□□□ 0.22
DDX55-206ENST00000539934 C1orf167Q5SNV9 1468 aa16.45■□□□□ 0.22
DDX55-206ENST00000539934 NUTM2FA1L443 756 aa16.44■□□□□ 0.22
DDX55-206ENST00000539934 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
DDX55-206ENST00000539934 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
DDX55-206ENST00000539934 LAMC1P11047 1609 aa16.44■□□□□ 0.22
DDX55-206ENST00000539934 PLCB2Q00722 1185 aa16.43■□□□□ 0.22
DDX55-206ENST00000539934 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
DDX55-206ENST00000539934 NBPF1Q3BBV0 1214 aa16.42■□□□□ 0.22
DDX55-206ENST00000539934 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
DDX55-206ENST00000539934 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
DDX55-206ENST00000539934 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
DDX55-206ENST00000539934 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
DDX55-206ENST00000539934 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
DDX55-206ENST00000539934 ROBO2Q9HCK4 1378 aa16.4■□□□□ 0.22
DDX55-206ENST00000539934 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.22
DDX55-206ENST00000539934 FOXO3O43524 673 aa16.39■□□□□ 0.21
DDX55-206ENST00000539934 ATRNO75882 1429 aa16.38■□□□□ 0.21
DDX55-206ENST00000539934 PTMAP06454 111 aaKnown RBP16.37■□□□□ 0.21
DDX55-206ENST00000539934 RGS22Q8NE09 1264 aa16.37■□□□□ 0.21
DDX55-206ENST00000539934 BCL9LQ86UU0 1499 aa16.37■□□□□ 0.21
DDX55-206ENST00000539934 ZNF592Q92610 1267 aa16.36■□□□□ 0.21
DDX55-206ENST00000539934 GJD4Q96KN9 370 aaPredicted RBP16.36■□□□□ 0.21
DDX55-206ENST00000539934 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
DDX55-206ENST00000539934 FKBP8Q14318 412 aa16.35■□□□□ 0.21
DDX55-206ENST00000539934 ZNF830Q96NB3 372 aaPredicted RBP16.34■□□□□ 0.21
DDX55-206ENST00000539934 NEXMIFQ5QGS0 1516 aa16.34■□□□□ 0.21
DDX55-206ENST00000539934 KIAA1210Q9ULL0 1709 aa16.34■□□□□ 0.21
DDX55-206ENST00000539934 UTRNP46939 3433 aa16.33■□□□□ 0.21
DDX55-206ENST00000539934 CLGNO14967 610 aa16.33■□□□□ 0.2
DDX55-206ENST00000539934 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
DDX55-206ENST00000539934 MYOM2P54296 1465 aa16.33■□□□□ 0.2
DDX55-206ENST00000539934 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
DDX55-206ENST00000539934 NEFMP07197 916 aa16.33■□□□□ 0.2
DDX55-206ENST00000539934 MCCP23508 829 aa16.33■□□□□ 0.2
DDX55-206ENST00000539934 PTCH1Q13635 1447 aa16.32■□□□□ 0.2
DDX55-206ENST00000539934 MMP14P50281 582 aa16.32■□□□□ 0.2
DDX55-206ENST00000539934 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
DDX55-206ENST00000539934 PLCD4Q9BRC7 762 aa16.32■□□□□ 0.2
DDX55-206ENST00000539934 STK26Q9P289 416 aa16.32■□□□□ 0.2
DDX55-206ENST00000539934 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
DDX55-206ENST00000539934 TMEM51Q9NW97 253 aa16.31■□□□□ 0.2
DDX55-206ENST00000539934 WAPLQ7Z5K2 1190 aa16.3■□□□□ 0.2
DDX55-206ENST00000539934 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
DDX55-206ENST00000539934 PPLO60437 1756 aa16.3■□□□□ 0.2
DDX55-206ENST00000539934 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
DDX55-206ENST00000539934 CCDC125Q86Z20 511 aa16.29■□□□□ 0.2
DDX55-206ENST00000539934 FAM193AP78312 1265 aa16.29■□□□□ 0.2
DDX55-206ENST00000539934 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
DDX55-206ENST00000539934 ADGRF5Q8IZF2 1346 aa16.28■□□□□ 0.2
DDX55-206ENST00000539934 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
DDX55-206ENST00000539934 UNC5CLQ8IV45 518 aa16.27■□□□□ 0.2
DDX55-206ENST00000539934 SEPT12Q8IYM1 358 aa16.27■□□□□ 0.19
DDX55-206ENST00000539934 TESK2Q96S53 571 aa16.27■□□□□ 0.19
DDX55-206ENST00000539934 PXDNQ92626 1479 aa16.27■□□□□ 0.19
DDX55-206ENST00000539934 A0A0G2JS52 829 aa16.26■□□□□ 0.19
DDX55-206ENST00000539934 TMF1P82094 1093 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms