RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
UBE3B-211ENST00000539843 ZRANB1Q9UGI0 708 aa22.04■■□□□ 1.12
UBE3B-211ENST00000539843 CCDC61Q9Y6R9 512 aa22.04■■□□□ 1.12
UBE3B-211ENST00000539843 ALS2Q96Q42 1657 aa22.02■■□□□ 1.12
UBE3B-211ENST00000539843 BLMP54132 1417 aaPredicted RBP22.02■■□□□ 1.12
UBE3B-211ENST00000539843 SRPK2P78362 688 aaKnown RBP22.01■■□□□ 1.11
UBE3B-211ENST00000539843 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
UBE3B-211ENST00000539843 COL14A1Q05707 1796 aaKnown RBP22■■□□□ 1.11
UBE3B-211ENST00000539843 KRT27Q7Z3Y8 459 aa22■■□□□ 1.11
UBE3B-211ENST00000539843 ONECUT3O60422 494 aaPredicted RBP21.98■■□□□ 1.11
UBE3B-211ENST00000539843 NBPF1Q3BBV0 1214 aa21.98■■□□□ 1.11
UBE3B-211ENST00000539843 ACEP12821 1306 aa21.98■■□□□ 1.11
UBE3B-211ENST00000539843 POLR3AO14802 1390 aaPredicted RBP21.98■■□□□ 1.11
UBE3B-211ENST00000539843 PLEKHG3A1L390 1219 aa21.96■■□□□ 1.11
UBE3B-211ENST00000539843 FAM98CQ17RN3 349 aaKnown RBP21.96■■□□□ 1.11
UBE3B-211ENST00000539843 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
UBE3B-211ENST00000539843 ABTB2Q8N961 1025 aa21.94■■□□□ 1.1
UBE3B-211ENST00000539843 NRAPQ86VF7 1730 aa21.93■■□□□ 1.1
UBE3B-211ENST00000539843 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
UBE3B-211ENST00000539843 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
UBE3B-211ENST00000539843 TOPAZ1Q8N9V7 1692 aa21.92■■□□□ 1.1
UBE3B-211ENST00000539843 PPIP5K1Q6PFW1 1433 aa21.92■■□□□ 1.1
UBE3B-211ENST00000539843 SPATA31A5Q5VU36 1347 aa21.92■■□□□ 1.1
UBE3B-211ENST00000539843 SPATA31A7Q8IWB4 1347 aa21.92■■□□□ 1.1
UBE3B-211ENST00000539843 NUTM2GQ5VZR2 741 aa21.92■■□□□ 1.1
UBE3B-211ENST00000539843 BRD4O60885 1362 aaPredicted RBP21.91■■□□□ 1.1
UBE3B-211ENST00000539843 BAG6P46379 1132 aa21.9■■□□□ 1.1
UBE3B-211ENST00000539843 EVA1CP58658 441 aa21.9■■□□□ 1.1
UBE3B-211ENST00000539843 ZC3H6P61129 1189 aaKnown RBP21.9■■□□□ 1.1
UBE3B-211ENST00000539843 NEUROD1Q13562 356 aa21.9■■□□□ 1.1
UBE3B-211ENST00000539843 NLRP13Q86W25 1043 aa21.9■■□□□ 1.1
UBE3B-211ENST00000539843 STRN4Q9NRL3 753 aa21.9■■□□□ 1.1
UBE3B-211ENST00000539843 ROCK2O75116 1388 aaKnown RBP21.89■■□□□ 1.1
UBE3B-211ENST00000539843 EVC2Q86UK5 1308 aa21.89■■□□□ 1.1
UBE3B-211ENST00000539843 CABP2Q9NPB3 220 aa21.89■■□□□ 1.09
UBE3B-211ENST00000539843 BRWD3Q6RI45 1802 aa21.89■■□□□ 1.09
UBE3B-211ENST00000539843 CRYBG1Q9Y4K1 1723 aa21.89■■□□□ 1.09
UBE3B-211ENST00000539843 CHRNA2Q15822 529 aa21.88■■□□□ 1.09
UBE3B-211ENST00000539843 PHRF1Q9P1Y6 1649 aaKnown RBP21.88■■□□□ 1.09
UBE3B-211ENST00000539843 QRICH2Q9H0J4 1663 aa21.86■■□□□ 1.09
UBE3B-211ENST00000539843 DEFB132Q7Z7B7 95 aa21.86■■□□□ 1.09
UBE3B-211ENST00000539843 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
UBE3B-211ENST00000539843 SPATA31A1Q5TZJ5 1347 aa21.84■■□□□ 1.09
UBE3B-211ENST00000539843 CABP1Q9NZU7 370 aa21.83■■□□□ 1.09
UBE3B-211ENST00000539843 CPDO75976 1380 aa21.83■■□□□ 1.08
UBE3B-211ENST00000539843 USP19O94966 1318 aa21.82■■□□□ 1.08
UBE3B-211ENST00000539843 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
UBE3B-211ENST00000539843 NRKQ7Z2Y5 1582 aa21.82■■□□□ 1.08
UBE3B-211ENST00000539843 EP400Q96L91 3159 aa21.81■■□□□ 1.08
UBE3B-211ENST00000539843 GCP02774 474 aa21.81■■□□□ 1.08
UBE3B-211ENST00000539843 USP6P35125 1406 aa21.8■■□□□ 1.08
UBE3B-211ENST00000539843 SSH2Q76I76 1423 aa21.8■■□□□ 1.08
UBE3B-211ENST00000539843 TRPM1Q7Z4N2 1603 aa21.8■■□□□ 1.08
UBE3B-211ENST00000539843 NLRP6P59044 892 aa21.8■■□□□ 1.08
UBE3B-211ENST00000539843 PDE3BQ13370 1112 aa21.8■■□□□ 1.08
UBE3B-211ENST00000539843 FAM196AQ6ZSG2 479 aa21.79■■□□□ 1.08
UBE3B-211ENST00000539843 THSD7AQ9UPZ6 1657 aa21.79■■□□□ 1.08
UBE3B-211ENST00000539843 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
UBE3B-211ENST00000539843 BARGINQ6ZT62 677 aa21.78■■□□□ 1.08
UBE3B-211ENST00000539843 ZNF692Q9BU19 519 aaPredicted RBP21.78■■□□□ 1.08
UBE3B-211ENST00000539843 THRAP3Q9Y2W1 955 aaKnown RBP21.78■■□□□ 1.08
UBE3B-211ENST00000539843 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
UBE3B-211ENST00000539843 RGPD1P0DJD0 1748 aa21.76■■□□□ 1.07
UBE3B-211ENST00000539843 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
UBE3B-211ENST00000539843 LARP1Q6PKG0 1096 aaKnown RBP21.75■■□□□ 1.07
UBE3B-211ENST00000539843 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
UBE3B-211ENST00000539843 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
UBE3B-211ENST00000539843 KCNH5Q8NCM2 988 aa21.73■■□□□ 1.07
UBE3B-211ENST00000539843 CARD11Q9BXL7 1154 aa21.73■■□□□ 1.07
UBE3B-211ENST00000539843 CAMTA1Q9Y6Y1 1673 aa21.72■■□□□ 1.07
UBE3B-211ENST00000539843 EN1Q05925 392 aaPredicted RBP21.72■■□□□ 1.07
UBE3B-211ENST00000539843 TTC21AQ8NDW8 1320 aa21.72■■□□□ 1.07
UBE3B-211ENST00000539843 LMO7Q8WWI1 1683 aa21.71■■□□□ 1.07
UBE3B-211ENST00000539843 AATKQ6ZMQ8 1374 aa21.71■■□□□ 1.07
UBE3B-211ENST00000539843 DISP2A7MBM2 1401 aa21.71■■□□□ 1.07
UBE3B-211ENST00000539843 CRB1P82279 1406 aa21.71■■□□□ 1.07
UBE3B-211ENST00000539843 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
UBE3B-211ENST00000539843 SLIT3O75094 1523 aa21.7■■□□□ 1.06
UBE3B-211ENST00000539843 TRIM37O94972 964 aa21.69■■□□□ 1.06
UBE3B-211ENST00000539843 TOM1L2Q6ZVM7 507 aa21.69■■□□□ 1.06
UBE3B-211ENST00000539843 TTC21BQ7Z4L5 1316 aa21.69■■□□□ 1.06
UBE3B-211ENST00000539843 KTN1Q86UP2 1357 aaKnown RBP21.69■■□□□ 1.06
UBE3B-211ENST00000539843 SBNO2Q9Y2G9 1366 aa21.69■■□□□ 1.06
UBE3B-211ENST00000539843 PARD3Q8TEW0 1356 aa21.68■■□□□ 1.06
UBE3B-211ENST00000539843 APBA3O96018 575 aa21.67■■□□□ 1.06
UBE3B-211ENST00000539843 PSDA5PKW4 1024 aaPredicted RBP21.65■■□□□ 1.06
UBE3B-211ENST00000539843 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
UBE3B-211ENST00000539843 HDGFL2Q7Z4V5 671 aaPredicted RBP21.65■■□□□ 1.06
UBE3B-211ENST00000539843 CPSF1Q10570 1443 aaKnown RBP21.64■■□□□ 1.06
UBE3B-211ENST00000539843 PIK3C2AO00443 1686 aa21.64■■□□□ 1.05
UBE3B-211ENST00000539843 SOX12O15370 315 aa21.64■■□□□ 1.05
UBE3B-211ENST00000539843 TMC1Q8TDI8 760 aa21.64■■□□□ 1.05
UBE3B-211ENST00000539843 CDCA7Q9BWT1 371 aaPredicted RBP21.64■■□□□ 1.05
UBE3B-211ENST00000539843 EZH2Q15910 746 aaKnown RBP21.63■■□□□ 1.05
UBE3B-211ENST00000539843 WDR17Q8IZU2 1322 aa21.62■■□□□ 1.05
UBE3B-211ENST00000539843 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
UBE3B-211ENST00000539843 DDB1Q16531 1140 aa21.62■■□□□ 1.05
UBE3B-211ENST00000539843 TNS1Q9HBL0 1735 aaKnown RBP21.62■■□□□ 1.05
UBE3B-211ENST00000539843 OVOS2A0A0G2JMS6 1433 aa21.62■■□□□ 1.05
UBE3B-211ENST00000539843 OVOS2A0A0J9YW53 1432 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms