RNA–Protein interactions for RNA: ENST00000539594.5

ESRRA-206, Transcript of estrogen related receptor alpha, humanhuman

TSL 3

Gene ESRRA, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-206ENST00000539594 FNBP4Q8N3X1 1017 aaPredicted RBP39.58■■■■□ 3.93
ESRRA-206ENST00000539594 ABCA3Q99758 1704 aa39.57■■■■□ 3.92
ESRRA-206ENST00000539594 CABLES1Q8TDN4 633 aa39.54■■■■□ 3.92
ESRRA-206ENST00000539594 ST20-MTHFSA0A0A6YYL1 179 aa39.52■■■■□ 3.92
ESRRA-206ENST00000539594 USP21Q9UK80 565 aa39.52■■■■□ 3.92
ESRRA-206ENST00000539594 PUS7Q96PZ0 661 aaKnown RBP39.51■■■■□ 3.92
ESRRA-206ENST00000539594 USP47Q96K76 1375 aa39.5■■■■□ 3.91
ESRRA-206ENST00000539594 RXRBP28702 533 aa39.49■■■■□ 3.91
ESRRA-206ENST00000539594 QTRT2Q9H974 415 aaKnown RBP39.49■■■■□ 3.91
ESRRA-206ENST00000539594 ZNF692Q9BU19 519 aaPredicted RBP39.48■■■■□ 3.91
ESRRA-206ENST00000539594 PLEKHG5O94827 1062 aa39.47■■■■□ 3.91
ESRRA-206ENST00000539594 TESK2Q96S53 571 aa39.47■■■■□ 3.91
ESRRA-206ENST00000539594 USP6P35125 1406 aa39.47■■■■□ 3.91
ESRRA-206ENST00000539594 TRPC5Q9UL62 973 aaPredicted RBP39.45■■■■□ 3.91
ESRRA-206ENST00000539594 CRYBG1Q9Y4K1 1723 aa39.45■■■■□ 3.91
ESRRA-206ENST00000539594 ABTB2Q8N961 1025 aa39.43■■■■□ 3.9
ESRRA-206ENST00000539594 AKAP12Q02952 1782 aa39.43■■■■□ 3.9
ESRRA-206ENST00000539594 SLIT2O94813 1529 aa39.42■■■■□ 3.9
ESRRA-206ENST00000539594 RBM6P78332 1123 aaKnown RBP39.42■■■■□ 3.9
ESRRA-206ENST00000539594 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.41■■■■□ 3.9
ESRRA-206ENST00000539594 BCL9LQ86UU0 1499 aa39.41■■■■□ 3.9
ESRRA-206ENST00000539594 CDK12Q9NYV4 1490 aaPredicted RBP39.41■■■■□ 3.9
ESRRA-206ENST00000539594 NWD2Q9ULI1 1742 aa39.38■■■■□ 3.89
ESRRA-206ENST00000539594 ATRNO75882 1429 aa39.38■■■■□ 3.89
ESRRA-206ENST00000539594 CPSF1Q10570 1443 aaKnown RBP39.38■■■■□ 3.89
ESRRA-206ENST00000539594 NLRP13Q86W25 1043 aa39.37■■■■□ 3.89
ESRRA-206ENST00000539594 UNC5CLQ8IV45 518 aa39.37■■■■□ 3.89
ESRRA-206ENST00000539594 SSH2Q76I76 1423 aa39.37■■■■□ 3.89
ESRRA-206ENST00000539594 PHRF1Q9P1Y6 1649 aaKnown RBP39.36■■■■□ 3.89
ESRRA-206ENST00000539594 TMF1P82094 1093 aa39.35■■■■□ 3.89
ESRRA-206ENST00000539594 PLCH1Q4KWH8 1693 aa39.35■■■■□ 3.89
ESRRA-206ENST00000539594 NUTM2GQ5VZR2 741 aa39.34■■■■□ 3.89
ESRRA-206ENST00000539594 NINLQ9Y2I6 1382 aa39.33■■■■□ 3.89
ESRRA-206ENST00000539594 TMC1Q8TDI8 760 aa39.33■■■■□ 3.89
ESRRA-206ENST00000539594 COL14A1Q05707 1796 aaKnown RBP39.33■■■■□ 3.89
ESRRA-206ENST00000539594 KTN1Q86UP2 1357 aaKnown RBP39.33■■■■□ 3.89
ESRRA-206ENST00000539594 FAM83GA6ND36 823 aa39.32■■■■□ 3.89
ESRRA-206ENST00000539594 USP19O94966 1318 aa39.31■■■■□ 3.88
ESRRA-206ENST00000539594 TTC21AQ8NDW8 1320 aa39.31■■■■□ 3.88
ESRRA-206ENST00000539594 MON2Q7Z3U7 1717 aa39.31■■■■□ 3.88
ESRRA-206ENST00000539594 HDGFL2Q7Z4V5 671 aaPredicted RBP39.29■■■■□ 3.88
ESRRA-206ENST00000539594 TTC21BQ7Z4L5 1316 aa39.29■■■■□ 3.88
ESRRA-206ENST00000539594 CDCA8Q53HL2 280 aa39.28■■■■□ 3.88
ESRRA-206ENST00000539594 PRDM11Q9NQV5 511 aa39.28■■■■□ 3.88
ESRRA-206ENST00000539594 TERF2IPQ9NYB0 399 aa39.28■■■■□ 3.88
ESRRA-206ENST00000539594 NLRP6P59044 892 aa39.27■■■■□ 3.88
ESRRA-206ENST00000539594 NRKQ7Z2Y5 1582 aa39.27■■■■□ 3.88
ESRRA-206ENST00000539594 SLC12A5Q9H2X9 1139 aa39.27■■■■□ 3.88
ESRRA-206ENST00000539594 CD163L1Q9NR16 1453 aa39.25■■■■□ 3.87
ESRRA-206ENST00000539594 GJD4Q96KN9 370 aaPredicted RBP39.25■■■■□ 3.87
ESRRA-206ENST00000539594 PIK3C2AO00443 1686 aa39.25■■■■□ 3.87
ESRRA-206ENST00000539594 KIAA0232Q92628 1395 aa39.23■■■■□ 3.87
ESRRA-206ENST00000539594 VPS72Q15906 364 aa39.22■■■■□ 3.87
ESRRA-206ENST00000539594 GCP02774 474 aa39.21■■■■□ 3.87
ESRRA-206ENST00000539594 BTG4Q9NY30 223 aa39.21■■■■□ 3.87
ESRRA-206ENST00000539594 CPDO75976 1380 aa39.21■■■■□ 3.87
ESRRA-206ENST00000539594 ZC3H6P61129 1189 aaKnown RBP39.2■■■■□ 3.87
ESRRA-206ENST00000539594 RGS12O14924 1447 aa39.2■■■■□ 3.87
ESRRA-206ENST00000539594 NRAPQ86VF7 1730 aa39.2■■■■□ 3.87
ESRRA-206ENST00000539594 SLIT3O75094 1523 aa39.19■■■■□ 3.86
ESRRA-206ENST00000539594 EIF4G2P78344 907 aaKnown RBP eCLIP39.18■■■■□ 3.862e-8■■■■□ 24.1
ESRRA-206ENST00000539594 A0A1W2PP64 1363 aa39.18■■■■□ 3.86
ESRRA-206ENST00000539594 EDC4Q6P2E9 1401 aaKnown RBP39.17■■■■□ 3.86
ESRRA-206ENST00000539594 KCNH5Q8NCM2 988 aa39.13■■■■□ 3.85
ESRRA-206ENST00000539594 GLI3P10071 1580 aa39.12■■■■□ 3.85
ESRRA-206ENST00000539594 CHRNA2Q15822 529 aa39.12■■■■□ 3.85
ESRRA-206ENST00000539594 CCDC9Q9Y3X0 531 aaKnown RBP39.12■■■■□ 3.85
ESRRA-206ENST00000539594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.11■■■■□ 3.85
ESRRA-206ENST00000539594 USP31Q70CQ4 1352 aa39.1■■■■□ 3.85
ESRRA-206ENST00000539594 USP54Q70EL1 1684 aa39.09■■■■□ 3.85
ESRRA-206ENST00000539594 ANKRD36BQ8N2N9 1353 aa39.09■■■■□ 3.85
ESRRA-206ENST00000539594 HSPA5P11021 654 aaKnown RBP39.05■■■■□ 3.84
ESRRA-206ENST00000539594 LMO7Q8WWI1 1683 aa39.05■■■■□ 3.84
ESRRA-206ENST00000539594 NME9Q86XW9 330 aa39.03■■■■□ 3.84
ESRRA-206ENST00000539594 AATKQ6ZMQ8 1374 aa39.01■■■■□ 3.84
ESRRA-206ENST00000539594 ONECUT3O60422 494 aaPredicted RBP39.01■■■■□ 3.84
ESRRA-206ENST00000539594 EVA1CP58658 441 aa39.01■■■■□ 3.84
ESRRA-206ENST00000539594 CAMTA1Q9Y6Y1 1673 aa39■■■■□ 3.83
ESRRA-206ENST00000539594 SPATA31A5Q5VU36 1347 aa39■■■■□ 3.83
ESRRA-206ENST00000539594 SPATA31A7Q8IWB4 1347 aa39■■■■□ 3.83
ESRRA-206ENST00000539594 STRN4Q9NRL3 753 aa38.99■■■■□ 3.83
ESRRA-206ENST00000539594 ARHGEF25Q86VW2 580 aa38.97■■■■□ 3.83
ESRRA-206ENST00000539594 NFAT5O94916 1531 aa38.97■■■■□ 3.83
ESRRA-206ENST00000539594 ZRANB1Q9UGI0 708 aa38.96■■■■□ 3.83
ESRRA-206ENST00000539594 MYOM1P52179 1685 aa38.96■■■■□ 3.83
ESRRA-206ENST00000539594 ZBTB7CA1YPR0 619 aa38.95■■■■□ 3.83
ESRRA-206ENST00000539594 OVOS2A0A0J9YW53 1432 aa38.94■■■■□ 3.82
ESRRA-206ENST00000539594 OVOS2Q6IE36 1432 aa38.94■■■■□ 3.82
ESRRA-206ENST00000539594 COL18A1P39060 1754 aa38.93■■■■□ 3.82
ESRRA-206ENST00000539594 SOX12O15370 315 aa38.93■■■■□ 3.82
ESRRA-206ENST00000539594 SEPT12Q8IYM1 358 aa38.93■■■■□ 3.82
ESRRA-206ENST00000539594 SPATA31A1Q5TZJ5 1347 aa38.92■■■■□ 3.82
ESRRA-206ENST00000539594 COL5A2P05997 1499 aaPredicted RBP38.92■■■■□ 3.82
ESRRA-206ENST00000539594 ABCC6O95255 1503 aa38.91■■■■□ 3.82
ESRRA-206ENST00000539594 FAM98CQ17RN3 349 aaKnown RBP38.9■■■■□ 3.82
ESRRA-206ENST00000539594 UPF1Q92900 1129 aaKnown RBP eCLIP38.9■■■■□ 3.82
ESRRA-206ENST00000539594 COG3Q96JB2 828 aa38.89■■■■□ 3.82
ESRRA-206ENST00000539594 BRWD3Q6RI45 1802 aa38.88■■■■□ 3.81
ESRRA-206ENST00000539594 LARP1Q6PKG0 1096 aaKnown RBP38.87■■■■□ 3.81
ESRRA-206ENST00000539594 A0A0G2JS52 829 aa38.85■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms