RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 RBM33Q96EV2 1170 aaKnown RBP14.56□□□□□ -0.08
LEMD3-202ENST00000539442 CPSF1Q10570 1443 aaKnown RBP14.56□□□□□ -0.08
LEMD3-202ENST00000539442 NSD3Q9BZ95 1437 aa14.56□□□□□ -0.08
LEMD3-202ENST00000539442 CARD14Q9BXL6 1004 aa14.55□□□□□ -0.08
LEMD3-202ENST00000539442 PRKRIP1Q9H875 184 aaPredicted RBP14.55□□□□□ -0.08
LEMD3-202ENST00000539442 MSH6P52701 1360 aa14.55□□□□□ -0.08
LEMD3-202ENST00000539442 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
LEMD3-202ENST00000539442 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
LEMD3-202ENST00000539442 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
LEMD3-202ENST00000539442 RALBP1Q15311 655 aa14.53□□□□□ -0.08
LEMD3-202ENST00000539442 CADPS2Q86UW7 1296 aa14.53□□□□□ -0.08
LEMD3-202ENST00000539442 EDC4Q6P2E9 1401 aaKnown RBP14.52□□□□□ -0.08
LEMD3-202ENST00000539442 POLR3AO14802 1390 aaPredicted RBP14.52□□□□□ -0.08
LEMD3-202ENST00000539442 NSD2O96028 1365 aa14.52□□□□□ -0.08
LEMD3-202ENST00000539442 PARD3Q8TEW0 1356 aa14.52□□□□□ -0.08
LEMD3-202ENST00000539442 CGNL1Q0VF96 1302 aa14.52□□□□□ -0.08
LEMD3-202ENST00000539442 NUTM2FA1L443 756 aa14.52□□□□□ -0.09
LEMD3-202ENST00000539442 ATF3P18847 181 aa14.52□□□□□ -0.09
LEMD3-202ENST00000539442 XIRP1Q702N8 1843 aaKnown RBP14.51□□□□□ -0.09
LEMD3-202ENST00000539442 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
LEMD3-202ENST00000539442 MST1RQ04912 1400 aa14.5□□□□□ -0.09
LEMD3-202ENST00000539442 MON2Q7Z3U7 1717 aa14.5□□□□□ -0.09
LEMD3-202ENST00000539442 ACEP12821 1306 aa14.5□□□□□ -0.09
LEMD3-202ENST00000539442 CCER2I3L3R5 266 aa14.5□□□□□ -0.09
LEMD3-202ENST00000539442 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
LEMD3-202ENST00000539442 LTBP4Q8N2S1 1624 aa14.5□□□□□ -0.09
LEMD3-202ENST00000539442 AKAP12Q02952 1782 aa14.5□□□□□ -0.09
LEMD3-202ENST00000539442 USP6P35125 1406 aa14.49□□□□□ -0.09
LEMD3-202ENST00000539442 BRD4O60885 1362 aaPredicted RBP14.49□□□□□ -0.09
LEMD3-202ENST00000539442 PHF8Q9UPP1 1060 aa14.49□□□□□ -0.09
LEMD3-202ENST00000539442 CC2D1BQ5T0F9 858 aaKnown RBP14.48□□□□□ -0.09
LEMD3-202ENST00000539442 KIF1AQ12756 1690 aa14.47□□□□□ -0.09
LEMD3-202ENST00000539442 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
LEMD3-202ENST00000539442 PMFBP1Q8TBY8 1022 aa14.47□□□□□ -0.09
LEMD3-202ENST00000539442 RGPD8O14715 1765 aaPredicted RBP14.47□□□□□ -0.09
LEMD3-202ENST00000539442 NRKQ7Z2Y5 1582 aa14.47□□□□□ -0.09
LEMD3-202ENST00000539442 MYBBP1AQ9BQG0 1328 aaKnown RBP14.46□□□□□ -0.09
LEMD3-202ENST00000539442 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
LEMD3-202ENST00000539442 ESCO1Q5FWF5 840 aa14.46□□□□□ -0.09
LEMD3-202ENST00000539442 SSH2Q76I76 1423 aa14.46□□□□□ -0.09
LEMD3-202ENST00000539442 TTC21AQ8NDW8 1320 aa14.45□□□□□ -0.1
LEMD3-202ENST00000539442 FYB1O15117 783 aa14.44□□□□□ -0.1
LEMD3-202ENST00000539442 TTC21BQ7Z4L5 1316 aa14.43□□□□□ -0.1
LEMD3-202ENST00000539442 CNGB1Q14028 1251 aaPredicted RBP14.43□□□□□ -0.1
LEMD3-202ENST00000539442 MORC1Q86VD1 984 aa14.43□□□□□ -0.1
LEMD3-202ENST00000539442 NLRP13Q86W25 1043 aa14.43□□□□□ -0.1
LEMD3-202ENST00000539442 ORAI2Q96SN7 254 aa14.43□□□□□ -0.1
LEMD3-202ENST00000539442 ANKRD26Q9UPS8 1709 aa14.43□□□□□ -0.1
LEMD3-202ENST00000539442 KIF20BQ96Q89 1820 aa14.43□□□□□ -0.1
LEMD3-202ENST00000539442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.42□□□□□ -0.1
LEMD3-202ENST00000539442 GGNBP2Q9H3C7 697 aa14.41□□□□□ -0.1
LEMD3-202ENST00000539442 SLAIN2Q9P270 581 aa14.41□□□□□ -0.1
LEMD3-202ENST00000539442 USP31Q70CQ4 1352 aa14.4□□□□□ -0.1
LEMD3-202ENST00000539442 NPHP3Q7Z494 1330 aa14.4□□□□□ -0.1
LEMD3-202ENST00000539442 IQSEC2Q5JU85 1478 aa14.39□□□□□ -0.11
LEMD3-202ENST00000539442 PPP2R1AP30153 589 aa14.39□□□□□ -0.11
LEMD3-202ENST00000539442 PSME1Q06323 249 aa14.39□□□□□ -0.11
LEMD3-202ENST00000539442 NME9Q86XW9 330 aa14.39□□□□□ -0.11
LEMD3-202ENST00000539442 COG3Q96JB2 828 aa14.39□□□□□ -0.11
LEMD3-202ENST00000539442 OVOS2A0A0J9YW53 1432 aa14.39□□□□□ -0.11
LEMD3-202ENST00000539442 OVOS2Q6IE36 1432 aa14.39□□□□□ -0.11
LEMD3-202ENST00000539442 FOXO3O43524 673 aa14.38□□□□□ -0.11
LEMD3-202ENST00000539442 BRINP3Q76B58 766 aa14.38□□□□□ -0.11
LEMD3-202ENST00000539442 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
LEMD3-202ENST00000539442 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
LEMD3-202ENST00000539442 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
LEMD3-202ENST00000539442 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
LEMD3-202ENST00000539442 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
LEMD3-202ENST00000539442 PIK3C2AO00443 1686 aa14.36□□□□□ -0.11
LEMD3-202ENST00000539442 TRPM3Q9HCF6 1732 aaPredicted RBP14.35□□□□□ -0.11
LEMD3-202ENST00000539442 PXDNQ92626 1479 aa14.34□□□□□ -0.11
LEMD3-202ENST00000539442 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
LEMD3-202ENST00000539442 CCDC184Q52MB2 194 aa14.34□□□□□ -0.11
LEMD3-202ENST00000539442 ABTB2Q8N961 1025 aa14.33□□□□□ -0.12
LEMD3-202ENST00000539442 ZRANB1Q9UGI0 708 aa14.33□□□□□ -0.12
LEMD3-202ENST00000539442 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
LEMD3-202ENST00000539442 TOM1O60784 492 aa14.32□□□□□ -0.12
LEMD3-202ENST00000539442 TNNT2P45379 298 aaPredicted RBP14.32□□□□□ -0.12
LEMD3-202ENST00000539442 NLRP6P59044 892 aa14.32□□□□□ -0.12
LEMD3-202ENST00000539442 SOS2Q07890 1332 aaPredicted RBP14.32□□□□□ -0.12
LEMD3-202ENST00000539442 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
LEMD3-202ENST00000539442 NHSL1Q5SYE7 1610 aa14.31□□□□□ -0.12
LEMD3-202ENST00000539442 XPCQ01831 940 aaPredicted RBP14.31□□□□□ -0.12
LEMD3-202ENST00000539442 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
LEMD3-202ENST00000539442 MTHFSP49914 203 aa14.3□□□□□ -0.12
LEMD3-202ENST00000539442 PNISRQ8TF01 805 aaKnown RBP14.3□□□□□ -0.12
LEMD3-202ENST00000539442 CFAP53Q96M91 514 aa14.3□□□□□ -0.12
LEMD3-202ENST00000539442 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
LEMD3-202ENST00000539442 KCNH5Q8NCM2 988 aa14.29□□□□□ -0.12
LEMD3-202ENST00000539442 DDX17Q92841 729 aaKnown RBP14.29□□□□□ -0.12
LEMD3-202ENST00000539442 USP19O94966 1318 aa14.29□□□□□ -0.12
LEMD3-202ENST00000539442 SPATA31A3Q5VYP0 1347 aa14.29□□□□□ -0.12
LEMD3-202ENST00000539442 INSRP06213 1382 aa14.29□□□□□ -0.12
LEMD3-202ENST00000539442 AHDC1Q5TGY3 1603 aaPredicted RBP14.29□□□□□ -0.12
LEMD3-202ENST00000539442 ROBO1Q9Y6N7 1651 aa14.29□□□□□ -0.12
LEMD3-202ENST00000539442 MARF1Q9Y4F3 1742 aaKnown RBP14.29□□□□□ -0.12
LEMD3-202ENST00000539442 SLIT3O75094 1523 aa14.28□□□□□ -0.12
LEMD3-202ENST00000539442 PNPLA6Q8IY17 1366 aa14.28□□□□□ -0.12
LEMD3-202ENST00000539442 CERKQ8TCT0 537 aa14.28□□□□□ -0.12
LEMD3-202ENST00000539442 CDK12Q9NYV4 1490 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms