RNA–Protein interactions for RNA: ENST00000538980.5

RAP1B-219, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3

Gene RAP1B, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-219	ENST00000538980	SLC24A1	O60721	1099 aa		28.19	■■■□□ 2.1
RAP1B-219	ENST00000538980	CRYBG1	Q9Y4K1	1723 aa		28.18	■■■□□ 2.1
RAP1B-219	ENST00000538980	CABLES1	Q8TDN4	633 aa		28.18	■■■□□ 2.1
RAP1B-219	ENST00000538980	USP6	P35125	1406 aa		28.18	■■■□□ 2.1
RAP1B-219	ENST00000538980	AFF2	P51816	1311 aa		28.18	■■■□□ 2.1
RAP1B-219	ENST00000538980	ZNF772	Q68DY9	489 aa	Predicted RBP	28.15	■■■□□ 2.1
RAP1B-219	ENST00000538980	NGLY1	Q96IV0	654 aa		28.15	■■■□□ 2.1
RAP1B-219	ENST00000538980	MON2	Q7Z3U7	1717 aa		28.15	■■■□□ 2.1
RAP1B-219	ENST00000538980	BRD4	O60885	1362 aa	Predicted RBP	28.14	■■■□□ 2.1
RAP1B-219	ENST00000538980	TMF1	P82094	1093 aa		28.14	■■■□□ 2.1
RAP1B-219	ENST00000538980	TMC1	Q8TDI8	760 aa		28.14	■■■□□ 2.1
RAP1B-219	ENST00000538980	POTEA	Q6S8J7	498 aa		28.13	■■■□□ 2.09
RAP1B-219	ENST00000538980	PUS7	Q96PZ0	661 aa	Known RBP	28.13	■■■□□ 2.09
RAP1B-219	ENST00000538980	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.13	■■■□□ 2.09
RAP1B-219	ENST00000538980	NRK	Q7Z2Y5	1582 aa		28.11	■■■□□ 2.09
RAP1B-219	ENST00000538980	NUTM2G	Q5VZR2	741 aa		28.11	■■■□□ 2.09
RAP1B-219	ENST00000538980	CPSF1	Q10570	1443 aa	Known RBP	28.1	■■■□□ 2.09
RAP1B-219	ENST00000538980	ABTB2	Q8N961	1025 aa		28.1	■■■□□ 2.09
RAP1B-219	ENST00000538980	ZNF692	Q9BU19	519 aa	Predicted RBP	28.1	■■■□□ 2.09
RAP1B-219	ENST00000538980	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.09	■■■□□ 2.09
RAP1B-219	ENST00000538980	KTN1	Q86UP2	1357 aa	Known RBP	28.09	■■■□□ 2.09
RAP1B-219	ENST00000538980	PLCH1	Q4KWH8	1693 aa		28.08	■■■□□ 2.09
RAP1B-219	ENST00000538980	SLC12A5	Q9H2X9	1139 aa		28.08	■■■□□ 2.09
RAP1B-219	ENST00000538980	SSH2	Q76I76	1423 aa		28.08	■■■□□ 2.09
RAP1B-219	ENST00000538980	CD163L1	Q9NR16	1453 aa		28.08	■■■□□ 2.09
RAP1B-219	ENST00000538980	PIK3C2A	O00443	1686 aa		28.07	■■■□□ 2.08
RAP1B-219	ENST00000538980	NINL	Q9Y2I6	1382 aa		28.07	■■■□□ 2.08
RAP1B-219	ENST00000538980	HSPA5	P11021	654 aa	Known RBP	28.05	■■■□□ 2.08
RAP1B-219	ENST00000538980	CDCA8	Q53HL2	280 aa		28.05	■■■□□ 2.08
RAP1B-219	ENST00000538980	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.05	■■■□□ 2.08
RAP1B-219	ENST00000538980	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.05	■■■□□ 2.08
RAP1B-219	ENST00000538980	USP21	Q9UK80	565 aa		28.05	■■■□□ 2.08
RAP1B-219	ENST00000538980	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.04	■■■□□ 2.08
RAP1B-219	ENST00000538980	TTC21B	Q7Z4L5	1316 aa		28.03	■■■□□ 2.08
RAP1B-219	ENST00000538980	TERF2IP	Q9NYB0	399 aa		28.03	■■■□□ 2.08
RAP1B-219	ENST00000538980	NWD2	Q9ULI1	1742 aa		28.03	■■■□□ 2.08
RAP1B-219	ENST00000538980	COL14A1	Q05707	1796 aa	Known RBP	28.02	■■■□□ 2.08
RAP1B-219	ENST00000538980	NLRP13	Q86W25	1043 aa		28.02	■■■□□ 2.08
RAP1B-219	ENST00000538980	SLIT2	O94813	1529 aa		28.02	■■■□□ 2.08
RAP1B-219	ENST00000538980		A0A1W2PP64	1363 aa		28.01	■■■□□ 2.07
RAP1B-219	ENST00000538980	TTC21A	Q8NDW8	1320 aa		28.01	■■■□□ 2.07
RAP1B-219	ENST00000538980	USP19	O94966	1318 aa		28	■■■□□ 2.07
RAP1B-219	ENST00000538980	MYOM1	P52179	1685 aa		28	■■■□□ 2.07
RAP1B-219	ENST00000538980	NLRP6	P59044	892 aa		27.99	■■■□□ 2.07
RAP1B-219	ENST00000538980	QTRT2	Q9H974	415 aa	Known RBP	27.99	■■■□□ 2.07
RAP1B-219	ENST00000538980	BCL9L	Q86UU0	1499 aa		27.99	■■■□□ 2.07
RAP1B-219	ENST00000538980	TRPC5	Q9UL62	973 aa	Predicted RBP	27.97	■■■□□ 2.07
RAP1B-219	ENST00000538980	EDC4	Q6P2E9	1401 aa	Known RBP	27.97	■■■□□ 2.07
RAP1B-219	ENST00000538980	ATRN	O75882	1429 aa		27.96	■■■□□ 2.07
RAP1B-219	ENST00000538980	FAM83G	A6ND36	823 aa		27.96	■■■□□ 2.07
RAP1B-219	ENST00000538980	RXRB	P28702	533 aa		27.96	■■■□□ 2.07
RAP1B-219	ENST00000538980	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.96	■■■□□ 2.07
RAP1B-219	ENST00000538980	PRDM11	Q9NQV5	511 aa		27.96	■■■□□ 2.07
RAP1B-219	ENST00000538980	SLIT3	O75094	1523 aa		27.96	■■■□□ 2.07
RAP1B-219	ENST00000538980	KIAA0232	Q92628	1395 aa		27.96	■■■□□ 2.07
RAP1B-219	ENST00000538980	NRAP	Q86VF7	1730 aa		27.95	■■■□□ 2.07
RAP1B-219	ENST00000538980	ANKRD36B	Q8N2N9	1353 aa		27.95	■■■□□ 2.06
RAP1B-219	ENST00000538980	ZC3H6	P61129	1189 aa	Known RBP	27.94	■■■□□ 2.06
RAP1B-219	ENST00000538980	UNC5CL	Q8IV45	518 aa		27.94	■■■□□ 2.06
RAP1B-219	ENST00000538980	USP54	Q70EL1	1684 aa		27.94	■■■□□ 2.06
RAP1B-219	ENST00000538980	GC	P02774	474 aa		27.92	■■■□□ 2.06
RAP1B-219	ENST00000538980	RBM6	P78332	1123 aa	Known RBP	27.92	■■■□□ 2.06
RAP1B-219	ENST00000538980	POLR3GL	Q9BT43	218 aa		27.92	■■■□□ 2.06
RAP1B-219	ENST00000538980	NME9	Q86XW9	330 aa		27.9	■■■□□ 2.06
RAP1B-219	ENST00000538980	BTG4	Q9NY30	223 aa		27.9	■■■□□ 2.06
RAP1B-219	ENST00000538980	CPD	O75976	1380 aa		27.89	■■■□□ 2.06
RAP1B-219	ENST00000538980	CHRNA2	Q15822	529 aa		27.89	■■■□□ 2.06
RAP1B-219	ENST00000538980	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.89	■■■□□ 2.05
RAP1B-219	ENST00000538980	USP31	Q70CQ4	1352 aa		27.87	■■■□□ 2.05
RAP1B-219	ENST00000538980	ZRANB1	Q9UGI0	708 aa		27.87	■■■□□ 2.05
RAP1B-219	ENST00000538980	LMO7	Q8WWI1	1683 aa		27.85	■■■□□ 2.05
RAP1B-219	ENST00000538980	ZBTB7C	A1YPR0	619 aa		27.85	■■■□□ 2.05
RAP1B-219	ENST00000538980	SOX12	O15370	315 aa		27.85	■■■□□ 2.05
RAP1B-219	ENST00000538980	GLI3	P10071	1580 aa		27.85	■■■□□ 2.05
RAP1B-219	ENST00000538980	KIF20B	Q96Q89	1820 aa		27.85	■■■□□ 2.05
RAP1B-219	ENST00000538980	RGS12	O14924	1447 aa		27.84	■■■□□ 2.05
RAP1B-219	ENST00000538980	KCNH5	Q8NCM2	988 aa		27.84	■■■□□ 2.05
RAP1B-219	ENST00000538980	GJD4	Q96KN9	370 aa	Predicted RBP	27.84	■■■□□ 2.05
RAP1B-219	ENST00000538980	CCDC9	Q9Y3X0	531 aa	Known RBP	27.84	■■■□□ 2.05
RAP1B-219	ENST00000538980	NFAT5	O94916	1531 aa		27.83	■■■□□ 2.05
RAP1B-219	ENST00000538980	VPS72	Q15906	364 aa		27.83	■■■□□ 2.05
RAP1B-219	ENST00000538980	OVOS2	A0A0J9YW53	1432 aa		27.82	■■■□□ 2.04
RAP1B-219	ENST00000538980	OVOS2	Q6IE36	1432 aa		27.82	■■■□□ 2.04
RAP1B-219	ENST00000538980	CAMTA1	Q9Y6Y1	1673 aa		27.81	■■■□□ 2.04
RAP1B-219	ENST00000538980	LTN1	O94822	1766 aa		27.8	■■■□□ 2.04
RAP1B-219	ENST00000538980	COL18A1	P39060	1754 aa		27.79	■■■□□ 2.04
RAP1B-219	ENST00000538980	NSD3	Q9BZ95	1437 aa		27.78	■■■□□ 2.04
RAP1B-219	ENST00000538980	C11orf95	C9JLR9	678 aa	Predicted RBP	27.78	■■■□□ 2.04
RAP1B-219	ENST00000538980	STRN4	Q9NRL3	753 aa		27.78	■■■□□ 2.04
RAP1B-219	ENST00000538980	RGPD5	Q99666	1765 aa		27.77	■■■□□ 2.04
RAP1B-219	ENST00000538980	AATK	Q6ZMQ8	1374 aa		27.76	■■■□□ 2.03
RAP1B-219	ENST00000538980	COG3	Q96JB2	828 aa		27.76	■■■□□ 2.03
RAP1B-219	ENST00000538980	EVA1C	P58658	441 aa		27.75	■■■□□ 2.03
RAP1B-219	ENST00000538980	ARHGEF25	Q86VW2	580 aa		27.75	■■■□□ 2.03
RAP1B-219	ENST00000538980	CARD14	Q9BXL6	1004 aa		27.75	■■■□□ 2.03
RAP1B-219	ENST00000538980	COL5A2	P05997	1499 aa	Predicted RBP	27.73	■■■□□ 2.03
RAP1B-219	ENST00000538980	KIF7	Q2M1P5	1343 aa		27.72	■■■□□ 2.03
RAP1B-219	ENST00000538980	SPATA31A5	Q5VU36	1347 aa		27.72	■■■□□ 2.03
RAP1B-219	ENST00000538980	SPATA31A7	Q8IWB4	1347 aa		27.72	■■■□□ 2.03
RAP1B-219	ENST00000538980	GGNBP2	Q9H3C7	697 aa		27.72	■■■□□ 2.03

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