RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.02■□□□□ 0.63
CDCA3-207ENST00000538862 KNDC1Q76NI1 1749 aa19■□□□□ 0.63
CDCA3-207ENST00000538862 DCCP43146 1447 aa19■□□□□ 0.63
CDCA3-207ENST00000538862 CARD14Q9BXL6 1004 aa18.99■□□□□ 0.63
CDCA3-207ENST00000538862 TECPR2O15040 1411 aa18.99■□□□□ 0.63
CDCA3-207ENST00000538862 MST1RQ04912 1400 aa18.99■□□□□ 0.63
CDCA3-207ENST00000538862 ABCC11Q96J66 1382 aa18.98■□□□□ 0.63
CDCA3-207ENST00000538862 PHLPP1O60346 1717 aa18.98■□□□□ 0.63
CDCA3-207ENST00000538862 CENPJQ9HC77 1338 aaPredicted RBP18.97■□□□□ 0.63
CDCA3-207ENST00000538862 C20orf194Q5TEA3 1177 aa18.97■□□□□ 0.63
CDCA3-207ENST00000538862 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
CDCA3-207ENST00000538862 KDM2BQ8NHM5 1336 aa18.96■□□□□ 0.63
CDCA3-207ENST00000538862 POLR3AO14802 1390 aaPredicted RBP18.96■□□□□ 0.63
CDCA3-207ENST00000538862 ADGRB1O14514 1584 aa18.96■□□□□ 0.63
CDCA3-207ENST00000538862 CENPQQ7L2Z9 268 aaPredicted RBP18.95■□□□□ 0.62
CDCA3-207ENST00000538862 E9PSI1 815 aa18.94■□□□□ 0.62
CDCA3-207ENST00000538862 APAF1O14727 1248 aa18.94■□□□□ 0.62
CDCA3-207ENST00000538862 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
CDCA3-207ENST00000538862 CCDC146Q8IYE0 955 aa18.93■□□□□ 0.62
CDCA3-207ENST00000538862 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
CDCA3-207ENST00000538862 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
CDCA3-207ENST00000538862 MED1Q15648 1581 aaPredicted RBP18.92■□□□□ 0.62
CDCA3-207ENST00000538862 NUTM2FA1L443 756 aa18.92■□□□□ 0.62
CDCA3-207ENST00000538862 COL16A1Q07092 1604 aaPredicted RBP18.92■□□□□ 0.62
CDCA3-207ENST00000538862 DDX17Q92841 729 aaKnown RBP18.92■□□□□ 0.62
CDCA3-207ENST00000538862 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
CDCA3-207ENST00000538862 QRICH2Q9H0J4 1663 aa18.91■□□□□ 0.62
CDCA3-207ENST00000538862 CDC42BPGQ6DT37 1551 aa18.91■□□□□ 0.62
CDCA3-207ENST00000538862 ORAI2Q96SN7 254 aa18.9■□□□□ 0.62
CDCA3-207ENST00000538862 PUS7Q96PZ0 661 aaKnown RBP18.9■□□□□ 0.62
CDCA3-207ENST00000538862 AHDC1Q5TGY3 1603 aaPredicted RBP18.9■□□□□ 0.62
CDCA3-207ENST00000538862 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
CDCA3-207ENST00000538862 USP32Q8NFA0 1604 aa18.89■□□□□ 0.61
CDCA3-207ENST00000538862 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
CDCA3-207ENST00000538862 POGKQ9P215 609 aa18.88■□□□□ 0.61
CDCA3-207ENST00000538862 NSD3Q9BZ95 1437 aa18.87■□□□□ 0.61
CDCA3-207ENST00000538862 NHSL1Q5SYE7 1610 aa18.87■□□□□ 0.61
CDCA3-207ENST00000538862 DLC1Q96QB1 1528 aa18.87■□□□□ 0.61
CDCA3-207ENST00000538862 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
CDCA3-207ENST00000538862 NBR1Q14596 966 aa18.86■□□□□ 0.61
CDCA3-207ENST00000538862 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
CDCA3-207ENST00000538862 ARHGEF28Q8N1W1 1705 aaKnown RBP18.85■□□□□ 0.61
CDCA3-207ENST00000538862 FMN2Q9NZ56 1722 aa18.85■□□□□ 0.61
CDCA3-207ENST00000538862 DEKP35659 375 aaKnown RBP18.85■□□□□ 0.61
CDCA3-207ENST00000538862 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
CDCA3-207ENST00000538862 RGPD8O14715 1765 aaPredicted RBP18.85■□□□□ 0.61
CDCA3-207ENST00000538862 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
CDCA3-207ENST00000538862 DDRGK1Q96HY6 314 aa18.84■□□□□ 0.61
CDCA3-207ENST00000538862 NINLQ9Y2I6 1382 aa18.84■□□□□ 0.61
CDCA3-207ENST00000538862 SLC12A5Q9H2X9 1139 aa18.84■□□□□ 0.61
CDCA3-207ENST00000538862 MINK1Q8N4C8 1332 aaPredicted RBP18.83■□□□□ 0.61
CDCA3-207ENST00000538862 JCADQ9P266 1359 aa18.83■□□□□ 0.6
CDCA3-207ENST00000538862 WWC1Q8IX03 1113 aa18.83■□□□□ 0.6
CDCA3-207ENST00000538862 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
CDCA3-207ENST00000538862 RTL5Q5HYW3 569 aaPredicted RBP18.82■□□□□ 0.6
CDCA3-207ENST00000538862 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
CDCA3-207ENST00000538862 CGNL1Q0VF96 1302 aa18.81■□□□□ 0.6
CDCA3-207ENST00000538862 BCAR3O75815 825 aa18.81■□□□□ 0.6
CDCA3-207ENST00000538862 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
CDCA3-207ENST00000538862 ILDR2Q71H61 639 aa18.8■□□□□ 0.6
CDCA3-207ENST00000538862 SKAP1Q86WV1 359 aa18.8■□□□□ 0.6
CDCA3-207ENST00000538862 NSD2O96028 1365 aa18.8■□□□□ 0.6
CDCA3-207ENST00000538862 FAM161AQ3B820 660 aa18.8■□□□□ 0.6
CDCA3-207ENST00000538862 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
CDCA3-207ENST00000538862 EVC2Q86UK5 1308 aa18.8■□□□□ 0.6
CDCA3-207ENST00000538862 XPCQ01831 940 aaPredicted RBP18.79■□□□□ 0.6
CDCA3-207ENST00000538862 FOXO3O43524 673 aa18.78■□□□□ 0.6
CDCA3-207ENST00000538862 CFAP53Q96M91 514 aa18.78■□□□□ 0.6
CDCA3-207ENST00000538862 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
CDCA3-207ENST00000538862 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
CDCA3-207ENST00000538862 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
CDCA3-207ENST00000538862 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
CDCA3-207ENST00000538862 CCDC27Q2M243 656 aa18.76■□□□□ 0.59
CDCA3-207ENST00000538862 LRP6O75581 1613 aa18.76■□□□□ 0.59
CDCA3-207ENST00000538862 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
CDCA3-207ENST00000538862 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
CDCA3-207ENST00000538862 TULP4Q9NRJ4 1543 aa18.76■□□□□ 0.59
CDCA3-207ENST00000538862 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
CDCA3-207ENST00000538862 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
CDCA3-207ENST00000538862 MTHFSP49914 203 aa18.75■□□□□ 0.59
CDCA3-207ENST00000538862 AAMPQ13685 434 aa18.75■□□□□ 0.59
CDCA3-207ENST00000538862 C8orf34Q49A92 452 aa18.75■□□□□ 0.59
CDCA3-207ENST00000538862 NUTM2AQ8IVF1 878 aaPredicted RBP18.75■□□□□ 0.59
CDCA3-207ENST00000538862 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
CDCA3-207ENST00000538862 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
CDCA3-207ENST00000538862 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
CDCA3-207ENST00000538862 NPHP3Q7Z494 1330 aa18.73■□□□□ 0.59
CDCA3-207ENST00000538862 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
CDCA3-207ENST00000538862 PXDNQ92626 1479 aa18.73■□□□□ 0.59
CDCA3-207ENST00000538862 PRR36Q9H6K5 1346 aa18.73■□□□□ 0.59
CDCA3-207ENST00000538862 KIF1AQ12756 1690 aa18.72■□□□□ 0.59
CDCA3-207ENST00000538862 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
CDCA3-207ENST00000538862 RGS17Q9UGC6 210 aaPredicted RBP18.72■□□□□ 0.59
CDCA3-207ENST00000538862 SPATA31A6Q5VVP1 1343 aa18.72■□□□□ 0.59
CDCA3-207ENST00000538862 PMFBP1Q8TBY8 1022 aa18.72■□□□□ 0.59
CDCA3-207ENST00000538862 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
CDCA3-207ENST00000538862 CLUAP1Q96AJ1 413 aa18.71■□□□□ 0.59
CDCA3-207ENST00000538862 CANXP27824 592 aaKnown RBP18.7■□□□□ 0.58
CDCA3-207ENST00000538862 RARSP54136 660 aaKnown RBP18.7■□□□□ 0.58
CDCA3-207ENST00000538862 ANKARQ7Z5J8 1434 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms